BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0075.0036.p (210 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770107.1| two-component response regulator [Bradyrhizobiu... 312 2e-83 ref|YP_576197.1| two component LuxR family transcriptional regul... 279 1e-73 ref|YP_004551474.1| LuxR family two component transcriptional re... 221 5e-56 ref|YP_001314307.1| response regulator receiver protein [Sinorhi... 221 6e-56 gb|AEG07239.1| two component transcriptional regulator, LuxR fam... 217 8e-55 >ref|NP_770107.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC48732.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] Length = 226 Score = 312 bits (799), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 154/196 (78%), Positives = 176/196 (89%) Query: 5 VHIVDDDASFRTALERRLKLAGYRVATYASASELLGQLPDDEETGCILLDVRIPGMSGPD 64 VH+VDDDASFRTA+ERRLKLAGY VATYAS+ +LL LP DE CILLDV++PG+SGPD Sbjct: 21 VHVVDDDASFRTAIERRLKLAGYDVATYASSQDLLDHLPRDELPSCILLDVQMPGLSGPD 80 Query: 65 LQRRLNELGSTLPIVFLTGYADTATTVQAIKAGAEDFLTKPIASEQLIEAINRAAARHEL 124 LQ+RL+ELGST+PIVFLTG+ADTATTV+AIKAGAEDFLTKP++S QLIEAI RA ++ E Sbjct: 81 LQKRLSELGSTVPIVFLTGHADTATTVRAIKAGAEDFLTKPVSSGQLIEAIERALSQQET 140 Query: 125 ARGRRTRLDSLRALLARLTPRERQVFDLIVRGRINKQIAHELGTTERTIKAHRHQVMEKM 184 ARG R+RLDS RA +A LTPRERQVFDLIVRG+INKQIA+ELGTTERT+KAHRHQVMEKM Sbjct: 141 ARGLRSRLDSRRAHVASLTPRERQVFDLIVRGKINKQIAYELGTTERTVKAHRHQVMEKM 200 Query: 185 QVQSLAELVSIAEQLG 200 QV SLAELVS A+ LG Sbjct: 201 QVSSLAELVSTAQLLG 216 >ref|YP_576197.1| two component LuxR family transcriptional regulator [Nitrobacter hamburgensis X14] gb|ABE61737.1| two component transcriptional regulator, LuxR family [Nitrobacter hamburgensis X14] Length = 210 Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 140/200 (70%), Positives = 166/200 (83%) Query: 1 MHAYVHIVDDDASFRTALERRLKLAGYRVATYASASELLGQLPDDEETGCILLDVRIPGM 60 M V+IVDDDASF TA+ERRLKLAGY V Y+SA LL +L E GC+LLDVR+PG+ Sbjct: 1 MPGLVYIVDDDASFLTAVERRLKLAGYEVEKYSSAQTLLDRLQGSERPGCVLLDVRMPGL 60 Query: 61 SGPDLQRRLNELGSTLPIVFLTGYADTATTVQAIKAGAEDFLTKPIASEQLIEAINRAAA 120 +G +LQ RL +L S LP+VF+TG+AD TTV+AI+AGAED L KP+ SEQLI AI RA A Sbjct: 61 NGLELQSRLIKLHSILPVVFVTGHADIPTTVRAIRAGAEDLLIKPVPSEQLIGAIERALA 120 Query: 121 RHELARGRRTRLDSLRALLARLTPRERQVFDLIVRGRINKQIAHELGTTERTIKAHRHQV 180 RHE R +R+RLD++ ALLA+LTPRERQVFDLIVRGRINKQ+A ELGTTERT+KAHRH+V Sbjct: 121 RHESVRSQRSRLDTVLALLAKLTPRERQVFDLIVRGRINKQVARELGTTERTVKAHRHEV 180 Query: 181 MEKMQVQSLAELVSIAEQLG 200 MEKM+V SLAELVSIAE+LG Sbjct: 181 MEKMRVHSLAELVSIAERLG 200 >ref|YP_004551474.1| LuxR family two component transcriptional regulator [Sinorhizobium meliloti AK83] gb|AEG57351.1| two component transcriptional regulator, LuxR family [Sinorhizobium meliloti AK83] Length = 204 Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 114/200 (57%), Positives = 146/200 (73%), Gaps = 2/200 (1%) Query: 1 MHAYVHIVDDDASFRTALERRLKLAGYRVATYASASELLGQLPDDEETGCILLDVRIPGM 60 M VHIVDDD SFR A+ R L +G+++ +Y+S ELL +LP +GCILLD+++PG+ Sbjct: 1 MGPTVHIVDDDKSFRAAVGRMLAASGFQIESYSSGEELLARLPRG--SGCILLDLQMPGL 58 Query: 61 SGPDLQRRLNELGSTLPIVFLTGYADTATTVQAIKAGAEDFLTKPIASEQLIEAINRAAA 120 SG +LQ RL +L LPIVFLTG D TV+A+KAGA DFL KP +S ++EA+ RA Sbjct: 59 SGLELQARLADLAPLLPIVFLTGRGDIGITVRAMKAGAHDFLEKPASSAAVLEAVERALQ 118 Query: 121 RHELARGRRTRLDSLRALLARLTPRERQVFDLIVRGRINKQIAHELGTTERTIKAHRHQV 180 E R R +L LLA LTPRE QVFDLIVRG+ NKQ+A EL T+ERT+KAHRH+V Sbjct: 119 LCETRRKEHDRAQALHTLLASLTPRESQVFDLIVRGKRNKQVAFELNTSERTVKAHRHKV 178 Query: 181 MEKMQVQSLAELVSIAEQLG 200 MEK+ V+SLAE+VS+AE+LG Sbjct: 179 MEKLGVRSLAEVVSMAERLG 198 >ref|YP_001314307.1| response regulator receiver protein [Sinorhizobium medicae WSM419] gb|ABR64374.1| response regulator receiver protein [Sinorhizobium medicae WSM419] Length = 218 Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 118/200 (59%), Positives = 143/200 (71%), Gaps = 1/200 (0%) Query: 1 MHAYVHIVDDDASFRTALERRLKLAGYRVATYASASELLGQLPDDEETGCILLDVRIPGM 60 M VHIVDDD SFRTAL R + AG+R ATY S +LL +L D E GCILLD+ +PG+ Sbjct: 1 MDPIVHIVDDDKSFRTALARLMGAAGFRTATYESGEDLLARL-SDPEAGCILLDLHMPGL 59 Query: 61 SGPDLQRRLNELGSTLPIVFLTGYADTATTVQAIKAGAEDFLTKPIASEQLIEAINRAAA 120 SG +LQ +L E LPIVFLTG A+ TVQAIKAGAEDFL KP + E L+EA++RA Sbjct: 60 SGLELQDQLAECAPMLPIVFLTGRAEIRATVQAIKAGAEDFLEKPASREALLEAVDRALR 119 Query: 121 RHELARGRRTRLDSLRALLARLTPRERQVFDLIVRGRINKQIAHELGTTERTIKAHRHQV 180 R + R R+ +L+A L LTPRE +VF LI RGR NKQIA++L T+ERT+KAHR Sbjct: 120 RCDARRAEYDRIHALKARLVSLTPREFEVFGLITRGRRNKQIAYDLSTSERTVKAHRRSA 179 Query: 181 MEKMQVQSLAELVSIAEQLG 200 MEK+ V SLAE VSIAE+LG Sbjct: 180 MEKLGVGSLAEAVSIAERLG 199 >gb|AEG07239.1| two component transcriptional regulator, LuxR family [Sinorhizobium meliloti BL225C] Length = 204 Score = 217 bits (553), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 112/200 (56%), Positives = 145/200 (72%), Gaps = 2/200 (1%) Query: 1 MHAYVHIVDDDASFRTALERRLKLAGYRVATYASASELLGQLPDDEETGCILLDVRIPGM 60 M VHIVDDD SFR A+ R L +G+++ +Y+S ELL +LP +GCILLD+++P + Sbjct: 1 MGPTVHIVDDDKSFRAAVGRMLAASGFQIESYSSGEELLARLP--RGSGCILLDLQMPCL 58 Query: 61 SGPDLQRRLNELGSTLPIVFLTGYADTATTVQAIKAGAEDFLTKPIASEQLIEAINRAAA 120 SG +LQ RL +L LPIVFLTG D TV+A+KAGA DFL KP +S ++EA+ RA Sbjct: 59 SGLELQARLADLAPLLPIVFLTGRGDIGITVRAMKAGAHDFLEKPASSAAVLEAVERALQ 118 Query: 121 RHELARGRRTRLDSLRALLARLTPRERQVFDLIVRGRINKQIAHELGTTERTIKAHRHQV 180 E R R +L L+A LTPRE QVFDLIVRG+ NKQ+A EL T+ERT+KAHRH+V Sbjct: 119 LCETRRKDHDRAQALHTLIASLTPRESQVFDLIVRGKRNKQVAFELNTSERTVKAHRHKV 178 Query: 181 MEKMQVQSLAELVSIAEQLG 200 MEK+ V+SLAE+VS+AE+LG Sbjct: 179 MEKLGVRSLAEVVSMAERLG 198