BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0075.0034.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770106.1| transcriptional regulator FixK [Bradyrhizobium ... 313 1e-83 ref|YP_576195.1| transcriptional regulator FixK [Nitrobacter ham... 308 4e-82 ref|YP_001238825.1| transcriptional regulator FixK [Bradyrhizobi... 282 3e-74 ref|YP_568479.1| transcriptional regulator FixK [Rhodopseudomona... 281 5e-74 ref|NP_769397.1| transcriptional regulator FixK [Bradyrhizobium ... 280 1e-73 >ref|NP_770106.1| transcriptional regulator FixK [Bradyrhizobium japonicum USDA 110] dbj|BAC48731.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 227 Score = 313 bits (802), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 158/224 (70%), Positives = 185/224 (82%), Gaps = 3/224 (1%) Query: 1 MFARVNVRPANVPSILG--GLTA-RHANCTTSEFHYRKGTEIYGEKEPAEYVYQVVSGAV 57 MF R+ + P+ L G+T+ + + +EF Y+KGTEIYGEKEPA+YVYQV SGAV Sbjct: 1 MFVRITTDASPRPNSLKDLGMTSDSNPIVSLNEFTYKKGTEIYGEKEPADYVYQVKSGAV 60 Query: 58 RSYKLLSDGRRQIGAFHLVGDIFGLENGETHRFTAEAIVDTNVHLIRRMSLERVADSDFA 117 RSYKLLSDGRRQIGAFHL GDIFGLENG HRFTAEAIVDT V LI+R SLE VA+SD Sbjct: 61 RSYKLLSDGRRQIGAFHLAGDIFGLENGSEHRFTAEAIVDTTVRLIKRQSLELVAESDAM 120 Query: 118 LARNLLVMTTSNLRHAEEHMLLLGRKTALERVAAFLLEMDRRLTGVGVVALPMCRRDIAD 177 +ARNLL MTTSNL+HAE+HMLLLGRKT+LERVAAFLLEMD+RL+GV V+ALPM RRDIAD Sbjct: 121 VARNLLNMTTSNLQHAEDHMLLLGRKTSLERVAAFLLEMDKRLSGVNVMALPMSRRDIAD 180 Query: 178 YLGLTLETVSRALSKLHAYGALNFLGSNQREIMLVDRDQLSRLD 221 YLGLTLETVSRA+S LH G L F+G+ QR+I+L++R QL+ LD Sbjct: 181 YLGLTLETVSRAISHLHDLGVLGFIGNTQRQIVLLNRQQLASLD 224 >ref|YP_576195.1| transcriptional regulator FixK [Nitrobacter hamburgensis X14] gb|ABE61735.1| transcriptional regulator, Crp/Fnr family [Nitrobacter hamburgensis X14] Length = 227 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 159/224 (70%), Positives = 180/224 (80%), Gaps = 3/224 (1%) Query: 1 MFARVNVRPANVPSILGGL-TARHANCTTS--EFHYRKGTEIYGEKEPAEYVYQVVSGAV 57 MF RV A + LG L A +N S EF Y+KGTEIYGEKEPAEYVYQV +GAV Sbjct: 1 MFVRVTTDLAYRATSLGELGIASDSNQKVSLNEFTYKKGTEIYGEKEPAEYVYQVKAGAV 60 Query: 58 RSYKLLSDGRRQIGAFHLVGDIFGLENGETHRFTAEAIVDTNVHLIRRMSLERVADSDFA 117 RSYKLLSDGRRQIGAFHLVGDIFGLENG HRFT EAIV T V LI+R SLE +A+SD Sbjct: 61 RSYKLLSDGRRQIGAFHLVGDIFGLENGSEHRFTTEAIVSTTVRLIKRRSLEMMAESDPM 120 Query: 118 LARNLLVMTTSNLRHAEEHMLLLGRKTALERVAAFLLEMDRRLTGVGVVALPMCRRDIAD 177 ++RNLL MTT NL+HAE HMLLLGRKT+LERVAAFL+EMDRRLT GV+ LPM RRDIAD Sbjct: 121 VSRNLLSMTTDNLQHAENHMLLLGRKTSLERVAAFLIEMDRRLTAAGVIPLPMSRRDIAD 180 Query: 178 YLGLTLETVSRALSKLHAYGALNFLGSNQREIMLVDRDQLSRLD 221 YLGLTLETVSRALS+LH + F+GS+QR+I+LV+R QL+RLD Sbjct: 181 YLGLTLETVSRALSRLHELDVIGFVGSDQRQIVLVNRRQLARLD 224 >ref|YP_001238825.1| transcriptional regulator FixK [Bradyrhizobium sp. BTAi1] gb|ABQ34919.1| transcriptional regulator, Crp/Fnr family [Bradyrhizobium sp. BTAi1] Length = 229 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 138/199 (69%), Positives = 160/199 (80%), Gaps = 2/199 (1%) Query: 23 HANCTTSEFHYRKGTEIYGEKEPAEYVYQVVSGAVRSYKLLSDGRRQIGAFHLVGDIFGL 82 HA SEF Y+K EIYGE EPAEYVYQV+SGAVRSYKLLSDGRRQIGAFHL GD+FGL Sbjct: 32 HAGLIASEFSYKKDEEIYGEDEPAEYVYQVISGAVRSYKLLSDGRRQIGAFHLPGDVFGL 91 Query: 83 ENGETHRFTAEAIVDTNVHLIRRMSLERVADSDFALARNLLVMTTSNLRHAEEHMLLLGR 142 E G +HR AEAI+DTNV L++R SLE+ A D A+AR L MT +LRHAE+HMLLLGR Sbjct: 92 EFGSSHRLAAEAIIDTNVRLVKRRSLEQAASVDVAVARKLWTMTAGDLRHAEDHMLLLGR 151 Query: 143 KTALERVAAFLLEMDRRLTGVGVVALPMCRRDIADYLGLTLETVSRALSKLHAYGALNFL 202 KTA+ERVA FLLEMDRRL G++ALPMCRRDI DYLGLTLETVSRALS+LH+ G L F Sbjct: 152 KTAMERVATFLLEMDRRLAVAGMMALPMCRRDIGDYLGLTLETVSRALSQLHSQGVLGFS 211 Query: 203 GSNQREIMLVDRDQLSRLD 221 G+ R+I+L +R +L +D Sbjct: 212 GA--RQIVLRNRQRLRSMD 228 >ref|YP_568479.1| transcriptional regulator FixK [Rhodopseudomonas palustris BisB5] gb|ABE38578.1| transcriptional regulator, Crp/Fnr family [Rhodopseudomonas palustris BisB5] Length = 229 Score = 281 bits (719), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 143/219 (65%), Positives = 167/219 (76%), Gaps = 2/219 (0%) Query: 3 ARVNVRPANVPSILGGLTARHANCTTSEFHYRKGTEIYGEKEPAEYVYQVVSGAVRSYKL 62 A+ V P+ P++ T HA SEF Y+K EIYGE EP+EYVYQVVSGAVRSYKL Sbjct: 12 AKAPVDPSCSPAVQFFATTGHAGLIASEFSYKKEEEIYGEDEPSEYVYQVVSGAVRSYKL 71 Query: 63 LSDGRRQIGAFHLVGDIFGLENGETHRFTAEAIVDTNVHLIRRMSLERVADSDFALARNL 122 LSDGRRQIGAF+L GD+FGLE+G THR TAEAIVDT V L++R SLE+ A +D +AR+L Sbjct: 72 LSDGRRQIGAFYLAGDVFGLESGPTHRLTAEAIVDTTVRLLKRRSLEQAAATDVHVARSL 131 Query: 123 LVMTTSNLRHAEEHMLLLGRKTALERVAAFLLEMDRRLTGVGVVALPMCRRDIADYLGLT 182 MT LRHAE+HMLLLGRK A+ERVA FLLEMDRRL G++ALPMCRRDI DYLGLT Sbjct: 132 WSMTAGELRHAEDHMLLLGRKNAMERVANFLLEMDRRLAVAGMMALPMCRRDIGDYLGLT 191 Query: 183 LETVSRALSKLHAYGALNFLGSNQREIMLVDRDQLSRLD 221 LETVSRALS+L + G L F G+ R+I L +R QL LD Sbjct: 192 LETVSRALSQLQSQGILGFSGA--RQIELRNRQQLRNLD 228 >ref|NP_769397.1| transcriptional regulator FixK [Bradyrhizobium japonicum USDA 110] dbj|BAC48022.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 235 Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 140/213 (65%), Positives = 162/213 (76%), Gaps = 3/213 (1%) Query: 9 PANVPSILGGLTARHANCTTSEFHYRKGTEIYGEKEPAEYVYQVVSGAVRSYKLLSDGRR 68 P V G +T H +EF YRK EIYGE EPAEYVYQVV+GAVRSYKLLSDGRR Sbjct: 25 PHQVSDQFGAITG-HVGLVATEFSYRKDEEIYGEDEPAEYVYQVVTGAVRSYKLLSDGRR 83 Query: 69 QIGAFHLVGDIFGLENGETHRFTAEAIVDTNVHLIRRMSLERVADSDFALARNLLVMTTS 128 QIGAFHL GD+FGLE+G +HR AEAI+DT+V L++R SLE+ A D +AR L MT Sbjct: 84 QIGAFHLPGDVFGLESGPSHRLAAEAIIDTSVRLVKRSSLEKAAGIDVQVARKLWAMTAG 143 Query: 129 NLRHAEEHMLLLGRKTALERVAAFLLEMDRRLTGVGVVALPMCRRDIADYLGLTLETVSR 188 LRHAE+HMLLLGRKTA+ERVA FLLEMDRRL G++ALPMCRRDI DYLGLTLETVSR Sbjct: 144 ELRHAEDHMLLLGRKTAMERVATFLLEMDRRLAVAGMMALPMCRRDIGDYLGLTLETVSR 203 Query: 189 ALSKLHAYGALNFLGSNQREIMLVDRDQLSRLD 221 ALS+LH G L F G+ R+I+L +R +L LD Sbjct: 204 ALSQLHTQGILGFSGA--RQIVLRNRQRLHNLD 234