BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0075.0023.p         (72 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772119.1| hypothetical protein bsl5479 [Bradyrhizobium ja...   137   6e-31
ref|YP_578321.1| twin-arginine translocation pathway signal [Nit...    70   8e-11
ref|ZP_07028585.1| formate dehydrogenase region TAT target [Afip...    67   1e-09
ref|YP_674997.1| twin-arginine translocation pathway signal [Mes...    55   3e-06
ref|YP_001314179.1| formate dehydrogenase region TAT target [Sin...    54   8e-06

>ref|NP_772119.1| hypothetical protein bsl5479 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50744.1| bsl5479 [Bradyrhizobium japonicum USDA 110]
          Length = 72

 Score =  137 bits (344), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 67/72 (93%), Positives = 68/72 (94%)

Query: 1  MSEDRTTTVGRRDFLRKVGVGTAGAGATLATPLVGAAQADSETNDEKRKARYKETDHVKA 60
          MSEDR  TVGRRDFLRKVG GT GAGATLATPLVG+AQADSETNDEKRKARYKETDHVKA
Sbjct: 1  MSEDRKATVGRRDFLRKVGAGTLGAGATLATPLVGSAQADSETNDEKRKARYKETDHVKA 60

Query: 61 FYRVNRYPAKGG 72
          FYRVNRYPAKGG
Sbjct: 61 FYRVNRYPAKGG 72


>ref|YP_578321.1| twin-arginine translocation pathway signal [Nitrobacter
          hamburgensis X14]
 gb|ABE63861.1| Twin-arginine translocation pathway signal [Nitrobacter
          hamburgensis X14]
          Length = 72

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 47/61 (77%)

Query: 9  VGRRDFLRKVGVGTAGAGATLATPLVGAAQADSETNDEKRKARYKETDHVKAFYRVNRYP 68
          VGRR FLR VGVG  G GA   +PL   A+ADSET DEKRK+RY+ TD VKA+YRVNRYP
Sbjct: 12 VGRRSFLRGVGVGALGVGALAISPLASPAEADSETYDEKRKSRYRVTDDVKAYYRVNRYP 71

Query: 69 A 69
          +
Sbjct: 72 S 72


>ref|ZP_07028585.1| formate dehydrogenase region TAT target [Afipia sp. 1NLS2]
 gb|EFI50008.1| formate dehydrogenase region TAT target [Afipia sp. 1NLS2]
          Length = 70

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 1/69 (1%)

Query: 1  MSEDRTTTVGRRDFLRKVGVGTAGAGATLATPLVGAAQADSETNDEKRKARYK-ETDHVK 59
          M ++    VGRR FLR VG+G  GAGA + +PL+  A+ADSETNDEKRKARY   +  ++
Sbjct: 1  MKDNDKAAVGRRSFLRGVGIGALGAGAAVVSPLMPEAKADSETNDEKRKARYNPNSPDIQ 60

Query: 60 AFYRVNRYP 68
          A+YRVNRYP
Sbjct: 61 AYYRVNRYP 69


>ref|YP_674997.1| twin-arginine translocation pathway signal [Mesorhizobium sp.
          BNC1]
 gb|ABG63832.1| Twin-arginine translocation pathway signal [Chelativorans sp.
          BNC1]
          Length = 69

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 1  MSEDRTTTVGRRDFLRKVGVGTAGAGATLATPLVGAAQADSETNDEKRKARYKETDHVKA 60
          M + R+  + RR+FLR  G G +      AT   G A A  +  +E+ +ARY+ETDH+KA
Sbjct: 1  MQDKRSRELSRRNFLRAFG-GVSTTAVAAATLAPGEAHA-YDPGEEETRARYRETDHIKA 58

Query: 61 FYRVNRYPAK 70
          FYRVN YP K
Sbjct: 59 FYRVNSYPEK 68


>ref|YP_001314179.1| formate dehydrogenase region TAT target [Sinorhizobium medicae
          WSM419]
 gb|ABR64246.1| Formate dehydrogenase region TAT target [Sinorhizobium medicae
          WSM419]
          Length = 69

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 1  MSEDRTTTVGRRDFLRKVGVGTAGAGATLATPLVGAAQADSETNDEKRKARYKETDHVKA 60
          M ++R T +GRR FL+  G G +      A      AQA  +  +E+ + RY+ETDHVKA
Sbjct: 1  MQDERQTALGRRYFLKAFG-GASTTVVAAAALCPTDAQA-YDPGEEEMRGRYRETDHVKA 58

Query: 61 FYRVNRYPAK 70
          +YRVNRYP +
Sbjct: 59 YYRVNRYPKQ 68