BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0075.0022.p (259 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772120.1| chaperone [Bradyrhizobium japonicum USDA 110] >... 392 e-107 ref|ZP_07028584.1| cytoplasmic chaperone TorD family protein [Af... 348 7e-94 ref|YP_578320.1| cytoplasmic chaperone TorD [Nitrobacter hamburg... 347 1e-93 ref|ZP_08628848.1| putative formate dehydrogenase-specific chape... 276 2e-72 ref|ZP_00049526.2| COG3381: Uncharacterized component of anaerob... 213 2e-53 >ref|NP_772120.1| chaperone [Bradyrhizobium japonicum USDA 110] dbj|BAC50745.1| bll5480 [Bradyrhizobium japonicum USDA 110] Length = 259 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 221/259 (85%), Positives = 233/259 (89%) Query: 1 VRDAGLERAIDAAGGVAELARKIGISQPSVSNWSKVPAQRVIAVEGATGISRDNLRPDLY 60 +RD GLERAIDAAGGVA LARKIGISQPSVSNW++VPAQRVIAVE ATG+SR +LRPDLY Sbjct: 1 MRDDGLERAIDAAGGVAGLARKIGISQPSVSNWNQVPAQRVIAVEAATGVSRKDLRPDLY 60 Query: 61 SEPLHAEAPIDSVDVARAQEYLLLATLLSAAPSGKLLDQLAALAVDATPLGRAHAELAAA 120 EP + I+ VD ARAQEYLLLATLLSAAPS +LLDQLAAL DATPLGRAHA LAAA Sbjct: 61 GEPFVSNELIEPVDAARAQEYLLLATLLSAAPSRRLLDQLAALTGDATPLGRAHAGLAAA 120 Query: 121 AANAVPAKVEREYFDLFTGLGRGELLPYASYYLTGFLNERPLSRLRADLAASGIERIANN 180 AANAV +VEREYFDLF GLGRGELLPYASYYLTGFLNERPLSRLRADLAASGIER ANN Sbjct: 121 AANAVATQVEREYFDLFVGLGRGELLPYASYYLTGFLNERPLSRLRADLAASGIERAANN 180 Query: 181 SEPEDHAAILCEIMAGFAGGRFPAAFDTQRAFFGKHVAPWMGRLFADIERAESAVFYRAV 240 SEPEDHAAILCEIMAGFAGGRFP +F+ QRAFF KHV PW+GRLFADIE AESAVFYRAV Sbjct: 181 SEPEDHAAILCEIMAGFAGGRFPTSFEAQRAFFVKHVEPWIGRLFADIEGAESAVFYRAV 240 Query: 241 GALGRAFIEIETEAFTFAN 259 GALGRAFIEIE EAFTFAN Sbjct: 241 GALGRAFIEIEAEAFTFAN 259 >ref|ZP_07028584.1| cytoplasmic chaperone TorD family protein [Afipia sp. 1NLS2] gb|EFI50007.1| cytoplasmic chaperone TorD family protein [Afipia sp. 1NLS2] Length = 258 Score = 348 bits (892), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 182/259 (70%), Positives = 208/259 (80%), Gaps = 1/259 (0%) Query: 1 VRDAGLERAIDAAGGVAELARKIGISQPSVSNWSKVPAQRVIAVEGATGISRDNLRPDLY 60 +RD+GL+RAI AGGVAELAR++GI QPSVSNWS+VPA+RV AVE ATG+SR +LRPDLY Sbjct: 1 MRDSGLDRAIQMAGGVAELARRVGIRQPSVSNWSRVPAERVAAVEAATGVSRVHLRPDLY 60 Query: 61 SEPLHAEAPIDSVDVARAQEYLLLATLLSAAPSGKLLDQLAALAVDATPLGRAHAELAAA 120 SE L + +DV RAQEY LLATLLS APS KLL Q+A L DATPLG AHA L A Sbjct: 61 SE-LAVTDQVHDIDVGRAQEYALLATLLSQAPSAKLLTQIAKLRGDATPLGLAHAHLGDA 119 Query: 121 AANAVPAKVEREYFDLFTGLGRGELLPYASYYLTGFLNERPLSRLRADLAASGIERIANN 180 A+ + A VEREYFDLF GLGRGEL+PYAS+YLTGFLNERPLSRLR DL A GIER+ NN Sbjct: 120 ASKSNAAAVEREYFDLFVGLGRGELMPYASFYLTGFLNERPLSRLRRDLDALGIERVENN 179 Query: 181 SEPEDHAAILCEIMAGFAGGRFPAAFDTQRAFFGKHVAPWMGRLFADIERAESAVFYRAV 240 EPEDHAA LCEIMAG AGGRFPA + QR F KH+APWMGRLF D+E A +A FYR+V Sbjct: 180 FEPEDHAATLCEIMAGLAGGRFPAREEAQREMFEKHMAPWMGRLFIDMENAAAANFYRSV 239 Query: 241 GALGRAFIEIETEAFTFAN 259 G+LGR F++IE EAFT A+ Sbjct: 240 GSLGRLFLQIEAEAFTLAD 258 >ref|YP_578320.1| cytoplasmic chaperone TorD [Nitrobacter hamburgensis X14] gb|ABE63860.1| cytoplasmic chaperone TorD [Nitrobacter hamburgensis X14] Length = 260 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 186/260 (71%), Positives = 202/260 (77%), Gaps = 1/260 (0%) Query: 1 VRDAGLERAIDAAGGVAELARKIGISQPSVSNWSKVPAQRVIAVEGATGISRDNLRPDLY 60 +RD+GL+RAI AGG AELAR+IGISQPSVSNW++VPA+RVIAVE TGISR LRPDLY Sbjct: 1 MRDSGLDRAIQVAGGQAELARRIGISQPSVSNWNRVPAERVIAVEAVTGISRLELRPDLY 60 Query: 61 SE-PLHAEAPIDSVDVARAQEYLLLATLLSAAPSGKLLDQLAALAVDATPLGRAHAELAA 119 SE + + +D VDV RAQEY LLATLLS AP LL QLA L DATPL AH LA Sbjct: 61 SELAVADDVDVDDVDVGRAQEYALLATLLSRAPPDTLLAQLARLRGDATPLELAHTRLAQ 120 Query: 120 AAANAVPAKVEREYFDLFTGLGRGELLPYASYYLTGFLNERPLSRLRADLAASGIERIAN 179 AA+ P VEREYFDLF GLGRGELLPYAS+YLTGFLNERPLSRLR DLAA GIER N Sbjct: 121 AASTITPVVVEREYFDLFLGLGRGELLPYASFYLTGFLNERPLSRLRQDLAALGIERAEN 180 Query: 180 NSEPEDHAAILCEIMAGFAGGRFPAAFDTQRAFFGKHVAPWMGRLFADIERAESAVFYRA 239 N EPEDHAA LCEIMAG AGG PA+ D QR F KH+APWMGRLFAD+E A A FYR Sbjct: 181 NFEPEDHAATLCEIMAGLAGGCIPASRDAQRLMFEKHIAPWMGRLFADMENAAGANFYRP 240 Query: 240 VGALGRAFIEIETEAFTFAN 259 VGALGR F+EIE EAFT N Sbjct: 241 VGALGRLFLEIEAEAFTLTN 260 >ref|ZP_08628848.1| putative formate dehydrogenase-specific chaperone [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08207.1| putative formate dehydrogenase-specific chaperone [Bradyrhizobiaceae bacterium SG-6C] Length = 262 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 146/262 (55%), Positives = 185/262 (70%), Gaps = 3/262 (1%) Query: 1 VRDAGLERAIDAAGGVAELARKIGISQPSVSNWSKVPAQRVIAVEGATGISRDNLRPDLY 60 +RD+GLE+AI AAGGVA LAR +GISQPS+S WS++PA+RV+ +E T + R LRPDLY Sbjct: 1 MRDSGLEQAIKAAGGVAALARAVGISQPSISAWSRIPAERVLTIETLTRVPRFILRPDLY 60 Query: 61 SE---PLHAEAPIDSVDVARAQEYLLLATLLSAAPSGKLLDQLAALAVDATPLGRAHAEL 117 + + + ID +D R+ EY LLA LL AP + L ++A L DA+ LG AH EL Sbjct: 61 GSAEVDVPSMSSIDEIDQLRSAEYGLLALLLGKAPDAQTLARVATLKGDASDLGMAHVEL 120 Query: 118 AAAAANAVPAKVEREYFDLFTGLGRGELLPYASYYLTGFLNERPLSRLRADLAASGIERI 177 A AAA+ + +E+FDLF GLGRGELLPYASYYLTGFL+ERPLSR+R D GIER Sbjct: 121 AEAAADVTESAAAKEFFDLFIGLGRGELLPYASYYLTGFLHERPLSRVREDFDLLGIERA 180 Query: 178 ANNSEPEDHAAILCEIMAGFAGGRFPAAFDTQRAFFGKHVAPWMGRLFADIERAESAVFY 237 ++ +PEDH AIL E+MAG A G F A F Q FF +H+ PW R+FAD+E SA FY Sbjct: 181 GSSRDPEDHIAILLEVMAGLARGEFDADFAAQVRFFERHLKPWAARMFADLEMQNSAKFY 240 Query: 238 RAVGALGRAFIEIETEAFTFAN 259 RAVG +GR F+E+E+EAFT + Sbjct: 241 RAVGRVGRVFMELESEAFTLSE 262 >ref|ZP_00049526.2| COG3381: Uncharacterized component of anaerobic dehydrogenases [Magnetospirillum magnetotacticum MS-1] Length = 211 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 113/185 (61%), Positives = 129/185 (69%) Query: 71 DSVDVARAQEYLLLATLLSAAPSGKLLDQLAALAVDATPLGRAHAELAAAAANAVPAKVE 130 D +D+ RAQ+Y LLA LL AP LL L+ L LGR LA AAA + +E Sbjct: 23 DEIDLLRAQQYDLLAVLLGRAPGPDLLAALSGLKDGEGALGRQITALAQAAAESDATAIE 82 Query: 131 REYFDLFTGLGRGELLPYASYYLTGFLNERPLSRLRADLAASGIERIANNSEPEDHAAIL 190 RE+F LF G+GRGELLPYASYYLTGFLNERPL+R+R D AA GIER A SEPEDH AIL Sbjct: 83 REFFALFIGVGRGELLPYASYYLTGFLNERPLARVREDFAALGIERDAAMSEPEDHLAIL 142 Query: 191 CEIMAGFAGGRFPAAFDTQRAFFGKHVAPWMGRLFADIERAESAVFYRAVGALGRAFIEI 250 E+MAG A GRF A Q FF +H+ PW GR FAD+E A++ FYRAVG LGRAFIEI Sbjct: 143 LEVMAGLAAGRFEAEAGMQVRFFARHIEPWAGRFFADLETAKAGRFYRAVGGLGRAFIEI 202 Query: 251 ETEAF 255 E EAF Sbjct: 203 EAEAF 207