BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0075.0021.p (206 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772121.1| hypothetical protein bll5481 [Bradyrhizobium ja... 291 4e-77 ref|YP_578319.1| hypothetical protein Nham_3123 [Nitrobacter ham... 171 7e-41 ref|ZP_07028583.1| conserved hypothetical protein [Afipia sp. 1N... 143 1e-32 ref|ZP_08628847.1| hypothetical protein CSIRO_1932 [Bradyrhizobi... 115 3e-24 ref|YP_001314181.1| hypothetical protein Smed_5494 [Sinorhizobiu... 107 8e-22 >ref|NP_772121.1| hypothetical protein bll5481 [Bradyrhizobium japonicum USDA 110] dbj|BAC50746.1| bll5481 [Bradyrhizobium japonicum USDA 110] Length = 208 Score = 291 bits (745), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 155/208 (74%), Positives = 165/208 (79%), Gaps = 2/208 (0%) Query: 1 MSEDKFLARWSRRKQEAKANATPPDPAMRDDMQSMPPPAVNDDDTEFDLSSLPSIDSITS 60 MSED+FL RWSRRKQ AKAN T DPA RDDMQS PPA DD+ EFD SSLPSID ITS Sbjct: 1 MSEDRFLTRWSRRKQHAKANPTQSDPAKRDDMQSALPPAAKDDEAEFDPSSLPSIDLITS 60 Query: 61 ATDITAFLRKGIPQELTRAALRRAWSADPVIRDFVGLAENAWDFNDPTAMPGFGPLDCSE 120 ATDI AFLRKGIPQELTRAALRRAWSADP IRDFVGLAE+AWDFNDPTAMPGFGPLDCSE Sbjct: 61 ATDIKAFLRKGIPQELTRAALRRAWSADPAIRDFVGLAESAWDFNDPTAMPGFGPLDCSE 120 Query: 121 PELAALIDRIVGGLSKPAEALPEPPVEVADSSQELCEVELPG--ITAEAAATTESAPDPA 178 ELAA +DRIVGGLSK AE L E PVEV DSS+EL + E + AE AA T+ AP PA Sbjct: 121 AELAAFVDRIVGGLSKSAETLSETPVEVTDSSRELRQAERSNVEVVAEEAAPTKPAPVPA 180 Query: 179 ATQRTVADSTESERPSVERRTHGSALPR 206 A Q TV +ST SE S+ RR HG ALPR Sbjct: 181 AAQLTVPESTASEHLSLPRRPHGGALPR 208 >ref|YP_578319.1| hypothetical protein Nham_3123 [Nitrobacter hamburgensis X14] gb|ABE63859.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 232 Score = 171 bits (432), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 111/233 (47%), Positives = 138/233 (59%), Gaps = 28/233 (12%) Query: 1 MSEDKFLARWSRRKQEAKANA---TPPDPAMRDDMQSMPPPA---VNDDDTEFDLSSLPS 54 M++ FL+RW+RRK+ A + TP A PPA V + EFDLS+LPS Sbjct: 1 MTDKGFLSRWARRKRMANVSVPSETPVSEANEGQKNESVPPASKGVVESVEEFDLSTLPS 60 Query: 55 IDSITSATDITAFLRKGIPQELTRAALRRAWSADPVIRDFVGLAENAWDFNDPTAMPGFG 114 ++SI++ TD+TAFLRKG+P L+R ALRRAW ADP IRDFVGLAENAWDFNDP AMPGFG Sbjct: 61 LESISATTDVTAFLRKGVPLALSREALRRAWIADPTIRDFVGLAENAWDFNDPDAMPGFG 120 Query: 115 PLDCSEPELAALIDRIVGGLSK-----PAEALPEPPVEVADSSQELCEVELP-------- 161 PLD + EL L+ RIVGG + +A P P E A S++ ELP Sbjct: 121 PLDYTPEELRDLVARIVGGARRATDDIAGDAAPHPGTEQAPSAEADWH-ELPAAADVPTA 179 Query: 162 --GITAEAAATTE----SAPDPAATQRTVADSTES--ERPSVERRTHGSALPR 206 G A A E S+ DP A R ++++ + PSV RRTHG ALPR Sbjct: 180 AAGQIACEAEQRESEYISSQDPEADLRERQENSQRRVDGPSVVRRTHGGALPR 232 >ref|ZP_07028583.1| conserved hypothetical protein [Afipia sp. 1NLS2] gb|EFI50006.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length = 229 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/229 (42%), Positives = 129/229 (56%), Gaps = 23/229 (10%) Query: 1 MSEDKFLARWSRRKQEAKA-------NATPPDPAMRDDMQSMPPPAVNDDDTEFDLSSLP 53 MS + FL+RWSRRK+ A+A + P+ +D + E DLS+LP Sbjct: 1 MSNEDFLSRWSRRKRVAEAAPESLPSSPVSGPPSAGEDEAPVVDSEAGKSVKEPDLSALP 60 Query: 54 SIDSITSATDITAFLRKGIPQELTRAALRRAWSADPVIRDFVGLAENAWDFNDPTAMPGF 113 +D+IT+ATD+TAFLRKG+P LTR ALRRAW+ADP IRDFVGLAENAWDFNDP MPGF Sbjct: 61 PLDTITAATDVTAFLRKGVPLALTREALRRAWAADPAIRDFVGLAENAWDFNDPNVMPGF 120 Query: 114 GPLDCSEPELAALIDRIV--------GGLSKPAEALPEPPVEVADSSQELCEVELPGITA 165 G LD + ++ L+ RI+ G + A L + + A S E E T Sbjct: 121 GSLDYTPEQVRDLVARIIRERNPVAEGEATSAAPQLQQNVINPAASPVTSSEGETAIDTP 180 Query: 166 EAA-----ATTESAPDPAATQR---TVADSTESERPSVERRTHGSALPR 206 +AA + + A + AT R D ++ + S+ RRTHG ALP+ Sbjct: 181 KAAIDRIESDGQVAENGIATPRAGSIAVDDGQARQSSLVRRTHGRALPQ 229 >ref|ZP_08628847.1| hypothetical protein CSIRO_1932 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08206.1| hypothetical protein CSIRO_1932 [Bradyrhizobiaceae bacterium SG-6C] Length = 235 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 72/177 (40%), Positives = 104/177 (58%), Gaps = 21/177 (11%) Query: 1 MSEDK------FLARWSRRKQEAK------ANATPPDPAMRDDMQSMPPPAVNDDDTEFD 48 MS+D+ FL+RWS+RKQEAK A P D A +P D+DT+FD Sbjct: 6 MSQDEKDNGKSFLSRWSQRKQEAKQPEGDSAAEKPADQAGGSPRSIVP----EDEDTQFD 61 Query: 49 LSSLPSIDSITSATDITAFLRKGIPQELTRAALRRAWSADPVIRDFVGLA-ENAWDFNDP 107 LSSLP +D IT TDIT FLRKG+P+ L AALR++W+ DP IR++V A + A+D+N P Sbjct: 62 LSSLPKLDEITEKTDITGFLRKGVPESLRNAALRKSWALDPAIRNYVNPALDYAYDWNSP 121 Query: 108 TAMPGFGPLDCSEPELAALIDRIVG---GLSKPAEALPEPPVEVADSSQELCEVELP 161 +PG G L + ++A ++ +I+G + ++ PP VAD+ E++ P Sbjct: 122 GGVPGHGEL-AAGTDVAKMVLQIMGSDPAVHHAQDSAAPPPEAVADADNGGAEMQKP 177 >ref|YP_001314181.1| hypothetical protein Smed_5494 [Sinorhizobium medicae WSM419] gb|ABR64248.1| conserved hypothetical protein [Sinorhizobium medicae WSM419] Length = 242 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 98/190 (51%), Gaps = 28/190 (14%) Query: 7 LARWSRRKQEAKANATPPDPAMR----------DDMQSMPPPAVNDDDT-EFD----LSS 51 LARWSRRK A+ P P + D + S P P + + E + + Sbjct: 9 LARWSRRKLAARREQEPAAPELEQASGDVAENDDPVASCPEPNLPETKAAELEGAETVEP 68 Query: 52 LPSIDSITSATDITAFLRKGIPQELTRAALRRAWSADPVIRDFVGLAENAWDFNDPTAMP 111 LP +D +T+ +D+ AFL+KG+P L AALR+ WS DP IRDFVG +E AWDFN +M Sbjct: 69 LPRLDDLTAESDVAAFLKKGVPMALKHAALRKVWSLDPGIRDFVGPSEYAWDFNKVASMG 128 Query: 112 GFGPLDCSEPELAALIDRIVGGLSKPAEAL-----PEPPVEVADSSQELCEVELPGITAE 166 GFGPLD +E +VG LSK A A+ PEP S+ L + LP E Sbjct: 129 GFGPLDANE--------TVVGFLSKAARAVDTLTEPEPGPSHEQSADALPDAVLPVENPE 180 Query: 167 AAATTESAPD 176 T +SA D Sbjct: 181 KLTTEKSATD 190