BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0075.0006.p (227 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002944922.1| PREDICTED: hypothetical protein LOC100491990... 280 2e-73 ref|YP_004109596.1| inner-membrane translocator [Rhodopseudomona... 279 2e-73 ref|NP_774509.1| ABC transporter permease protein [Bradyrhizobiu... 180 1e-43 ref|YP_998272.1| inner-membrane translocator [Verminephrobacter ... 160 2e-37 ref|ZP_05843366.1| inner-membrane translocator [Rhodobacter sp. ... 155 4e-36 >ref|XP_002944922.1| PREDICTED: hypothetical protein LOC100491990 [Xenopus (Silurana) tropicalis] Length = 2211 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 136/206 (66%), Positives = 171/206 (83%) Query: 15 LFLGELLEKRWMEPIIPFTLTIAVFLAFAIMIPRYLTAGSLQELMRNFAEQGMVAVAMAF 74 +FLGELLEKRWMEP +PFTLTIAVF AFA++IP + + SL++L +FAEQ MVAVAMA Sbjct: 1233 VFLGELLEKRWMEPFVPFTLTIAVFAAFALVIPGFASLASLRQLSTSFAEQAMVAVAMAV 1292 Query: 75 SVLSGGIDLSVGAVFAMSNFLALYLYLILGLPLPVTIVLVVLFGAAMGAINGGLIAYGKT 134 SVLSGGIDLSVGAVFAM+NFL LY YL+ +PLP+ + VVLFGAAMGA+NG LIAYG+T Sbjct: 1293 SVLSGGIDLSVGAVFAMANFLTLYTYLVKDMPLPLVVPGVVLFGAAMGAVNGALIAYGRT 1352 Query: 135 RPFLTTLVVLIIVRAAYNKVTVAFTNELASIDSGSSTWDFMGSGRVLGIPFNMLVLILLA 194 RPFLTTLV+LI++RA YNK T T+ LAS+ S WDF+G+G +LG+P NM+ L+L+A Sbjct: 1353 RPFLTTLVMLIVLRALYNKFTAVTTDALASVAPDSPVWDFLGAGSLLGVPTNMVALLLIA 1412 Query: 195 VGTHFFLTRIKPGVHIMAVGSSXTSS 220 + +HFFLTR++PGVHIMAVG+S ++ Sbjct: 1413 LSSHFFLTRLRPGVHIMAVGASRKAA 1438 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 11/193 (5%) Query: 38 VFLAFAIMIPRYLTAGSLQELMRNFAEQGMVAVAMAFSVLSGGIDLSVGAVFAMSNFLAL 97 VFL F+ +P +L+ G+L L RN + G++A+ MA V++ G+DLS Sbjct: 622 VFLVFSATLPGFLSLGNLLALSRNISILGVLALGMAIVVIARGLDLSQ-VAVMACAAAVA 680 Query: 98 YLYLILGLPLPVTIVLVVLFGAAMGAINGGLIAYGKTRPFLTT----LVVLIIVRAAYNK 153 + + G P PV + L ++ A+GA+NG LIA + P LTT L VL + R Sbjct: 681 VIVMNAGWPTPVALALGLVMALAVGAVNGWLIAVVEMPPLLTTLASGLAVLGLTR----- 735 Query: 154 VTVAFTNELASIDSGSSTWDFMGSGRVLGIPFNMLVLILLAVGTHFFLTRIKPGVHIMAV 213 + A + + ++ +G + +G G+P ++V ++A G H L+R G I A Sbjct: 736 -STAVQHFVVNLGAGHEGFLQLGGNLPGGLPAPLVVFTIVAAGVHLLLSRTVLGRFIYAH 794 Query: 214 GSSXTSSACCSRP 226 G + ++ P Sbjct: 795 GDNPETARLTGLP 807 >ref|YP_004109596.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gb|ADU44863.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 722 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 137/220 (62%), Positives = 176/220 (80%) Query: 1 MKSLQRAWHRHSPQLFLGELLEKRWMEPIIPFTLTIAVFLAFAIMIPRYLTAGSLQELMR 60 M++L+R W+R+SPQL+ GELLEKRWMEPI+PFTL I VF+ F + IP Y + LQ+LMR Sbjct: 1 MQALRRLWYRYSPQLWFGELLEKRWMEPIVPFTLLILVFVGFLLTIPGYTSLPQLQQLMR 60 Query: 61 NFAEQGMVAVAMAFSVLSGGIDLSVGAVFAMSNFLALYLYLILGLPLPVTIVLVVLFGAA 120 +FAEQG VA+AMA SVLSGGIDLSVGAVFAM++FL LYL ++ PLP+ IV V+ +GA Sbjct: 61 SFAEQGFVAMAMAISVLSGGIDLSVGAVFAMADFLTLYLLMVREWPLPLAIVAVLAWGAL 120 Query: 121 MGAINGGLIAYGKTRPFLTTLVVLIIVRAAYNKVTVAFTNELASIDSGSSTWDFMGSGRV 180 +GA+NGGLIAY KTRPFLTT+VVLII+RAAYNK+T + +LAS S S WD++G+G + Sbjct: 121 IGAVNGGLIAYAKTRPFLTTMVVLIILRAAYNKLTGLYAIDLASASSDSEAWDYLGTGYL 180 Query: 181 LGIPFNMLVLILLAVGTHFFLTRIKPGVHIMAVGSSXTSS 220 GIP NM+ LI++ + H +LTRI+ GVHIMAVGSS ++ Sbjct: 181 FGIPINMVFLIVVGLIGHLYLTRIRSGVHIMAVGSSRKAA 220 >ref|NP_774509.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53134.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 707 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 94/219 (42%), Positives = 138/219 (63%) Query: 9 HRHSPQLFLGELLEKRWMEPIIPFTLTIAVFLAFAIMIPRYLTAGSLQELMRNFAEQGMV 68 +R+ P LGE+L KRW E IP L + V LA + I +L+ SL + R E G + Sbjct: 12 YRYWPDHLLGEILSKRWTETAIPVILLLIVGLALSRSIDNFLSPASLADTARQAGEIGFI 71 Query: 69 AVAMAFSVLSGGIDLSVGAVFAMSNFLALYLYLILGLPLPVTIVLVVLFGAAMGAINGGL 128 A+ +A V+ GGIDLSVG++FA+++F ALYL +LG P+P + +L GA +GA+NG L Sbjct: 72 ALGLALVVIVGGIDLSVGSIFALTDFCALYLLDVLGWPVPAVVAATLLCGALLGAVNGVL 131 Query: 129 IAYGKTRPFLTTLVVLIIVRAAYNKVTVAFTNELASIDSGSSTWDFMGSGRVLGIPFNML 188 I Y + R F+TTL+ LII R+AY+ + ++N +AS +WDF+G G + GIP L Sbjct: 132 IGYLRLRAFITTLITLIIYRSAYDLLIQRYSNAIASAFPDIPSWDFIGGGSIFGIPTVAL 191 Query: 189 VLILLAVGTHFFLTRIKPGVHIMAVGSSXTSSACCSRPM 227 V I++A+ H F+TR++PG HI A+G S S+ P+ Sbjct: 192 VYIVIAIFGHIFMTRLRPGWHITAIGGSRRSAYNSGIPV 230 >ref|YP_998272.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gb|ABM59254.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 704 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 140/219 (63%) Query: 2 KSLQRAWHRHSPQLFLGELLEKRWMEPIIPFTLTIAVFLAFAIMIPRYLTAGSLQELMRN 61 ++L R +R+ P ++GELL KRW E IP L +AV LA +IP + + L + +R Sbjct: 3 ETLTRLRYRYWPDHWVGELLSKRWTESAIPVLLLVAVLLASEQLIPNFHSPVMLADTLRQ 62 Query: 62 FAEQGMVAVAMAFSVLSGGIDLSVGAVFAMSNFLALYLYLILGLPLPVTIVLVVLFGAAM 121 E G++ + +A ++ GGIDLSVG++FA++NF AL +L P+ ++++ +L GA + Sbjct: 63 AGEIGLIVLGLALVMIVGGIDLSVGSIFALTNFCALMCMHVLKWPMAASVLVTLLAGALL 122 Query: 122 GAINGGLIAYGKTRPFLTTLVVLIIVRAAYNKVTVAFTNELASIDSGSSTWDFMGSGRVL 181 GA+NG LI Y + R FLTTL+ LII R+ Y +++ ++ +A S+ WDF+G+G +L Sbjct: 123 GAVNGLLIGYLQLRAFLTTLITLIIFRSIYEILSLQYSTAIAGAVPDSAAWDFLGNGTLL 182 Query: 182 GIPFNMLVLILLAVGTHFFLTRIKPGVHIMAVGSSXTSS 220 G+P V ++A+G H LTR++ G HIMA+G S S+ Sbjct: 183 GLPTVAWVYAVVAIGGHVLLTRLRIGWHIMAIGGSRRSA 221 >ref|ZP_05843366.1| inner-membrane translocator [Rhodobacter sp. SW2] gb|EEW25584.1| inner-membrane translocator [Rhodobacter sp. SW2] Length = 707 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 89/221 (40%), Positives = 124/221 (56%), Gaps = 1/221 (0%) Query: 1 MKSLQRAWHRH-SPQLFLGELLEKRWMEPIIPFTLTIAVFLAFAIMIPRYLTAGSLQELM 59 ++ +AW + P +GE+L KRW + IPF + F +IP + SLQE Sbjct: 3 LRERLQAWRYNLVPDHLIGEILTKRWTDNAIPFLALVVTVATFGTLIPGFFKPLSLQEST 62 Query: 60 RNFAEQGMVAVAMAFSVLSGGIDLSVGAVFAMSNFLALYLYLILGLPLPVTIVLVVLFGA 119 R E +V + + +L GGIDL+VG++FA+S F A+ + I LP+ V + GA Sbjct: 63 RQLGEFSLVVIGLTVVMLGGGIDLAVGSIFALSAFAAVSCFFIFELPVWVAFAASLAVGA 122 Query: 120 AMGAINGGLIAYGKTRPFLTTLVVLIIVRAAYNKVTVAFTNELASIDSGSSTWDFMGSGR 179 A GAING LI Y + R FLTTLV II RA Y+ + VAF + + + S WDF+G G Sbjct: 123 AFGAINGYLIGYLRLRAFLTTLVTFIIGRAIYDILVVAFASRVQMSSATSPIWDFIGDGT 182 Query: 180 VLGIPFNMLVLILLAVGTHFFLTRIKPGVHIMAVGSSXTSS 220 LGI + LA+ TH LTR +PG H++AVG S S+ Sbjct: 183 ALGISVPVWAAFGLAIVTHIALTRSRPGWHVLAVGGSRRSA 223