BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0074.0010.p (467 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773241.1| UDP-N-acetylmuramate--L-alanine ligase [Bradyrh... 834 0.0 ref|YP_001242001.1| UDP-N-acetylmuramate--L-alanine ligase [Brad... 811 0.0 ref|YP_004108169.1| UDP-N-acetylmuramate/alanine ligase [Rhodops... 805 0.0 ref|YP_001207545.1| UDP-N-acetylmuramate--L-alanine ligase [Brad... 798 0.0 ref|YP_485615.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodops... 795 0.0 >ref|NP_773241.1| UDP-N-acetylmuramate--L-alanine ligase [Bradyrhizobium japonicum USDA 110] sp|Q89FU8.1|MURC_BRAJA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase dbj|BAC51866.1| UDP-N-acetylmuramate-alanine ligase [Bradyrhizobium japonicum USDA 110] Length = 467 Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/467 (90%), Positives = 441/467 (94%) Query: 1 MRLPREIGPIHFVGIGGIGMSGIAEVLINLGYTVQGSDASDNYNLDRLRKKGAKVSVGHA 60 MRLPREIGPIHFVGIGGIGMSGIAEVL+NLGY VQGSDASDNYNLDRLRKKGAKVSVGH Sbjct: 1 MRLPREIGPIHFVGIGGIGMSGIAEVLVNLGYAVQGSDASDNYNLDRLRKKGAKVSVGHK 60 Query: 61 AENVDGADVVVVSTAIKRDNPELMAARARRIPVVRRAEMLAELMRLKSCVAIAGTHGKTT 120 AENVDGA+VVVVSTAIKRDNPELMAAR RRIPVVRRAEMLAELMRLKSCVAIAGTHGKTT Sbjct: 61 AENVDGAEVVVVSTAIKRDNPELMAARERRIPVVRRAEMLAELMRLKSCVAIAGTHGKTT 120 Query: 121 TTTMVATLLDAGGLDPTVINGGIINAYGSNARLGAGDWMVVEADESDGTFLKLPSDVVIV 180 TTTMVATLLDAGGLDPTVINGGIINAYGSNARLGAGDWMVVEADESDGTFLKLP+DV IV Sbjct: 121 TTTMVATLLDAGGLDPTVINGGIINAYGSNARLGAGDWMVVEADESDGTFLKLPTDVAIV 180 Query: 181 TNIDPEHLDHFKTFEAIQDAFRNFVENVPFYGFAVMCTDHPVVQALVGKIEDRRIITYGQ 240 TN+DPEHLDHFKTFEA+QDAFR+FVEN+PFYGFAVMC DHPVVQ+LVGKIEDRRIITYG+ Sbjct: 181 TNVDPEHLDHFKTFEAVQDAFRHFVENLPFYGFAVMCIDHPVVQSLVGKIEDRRIITYGE 240 Query: 241 NPQADAQLKDLTPTGGGSKFSVAIRDRKSGAVHEIADIMLPMPGRHNASNATAAIAVAHQ 300 NPQAD +L DLTP GGGSKF VA RDRK+GAVHEI D+MLPMPGRHNASNATAAIAVA + Sbjct: 241 NPQADVRLVDLTPMGGGSKFKVAFRDRKTGAVHEIPDLMLPMPGRHNASNATAAIAVARE 300 Query: 301 LGVSDDVIRQAMSGFGGVKRRFTKTGETNGITVIDDYGHHPVEIAAVLKAARESVNGKIV 360 LGVSD+ IR A++GFGGVKRRFTKTGE NG+TVIDDYGHHPVEIAAVLKAARES NGKIV Sbjct: 301 LGVSDEAIRSAIAGFGGVKRRFTKTGEWNGVTVIDDYGHHPVEIAAVLKAARESTNGKIV 360 Query: 361 AVVQPHRYTRLQSLFEEFCTCFNDADAVVVAEVYPAGEAPIAGIDRDHFAAGLRAHGHRN 420 AVVQPHRYTRLQSLFEEFCTCFNDADAV+VA+VY AGEAPI GIDRDHF AGLRAHGHR Sbjct: 361 AVVQPHRYTRLQSLFEEFCTCFNDADAVIVADVYAAGEAPIDGIDRDHFVAGLRAHGHRE 420 Query: 421 VVPLPNAGELAKIVHGLAKPGDLVVCLGAGNITQWAYALPGELKALG 467 VVPLP A ELA IV GLAK GDLVVCLGAGNITQWAYALPGEL ALG Sbjct: 421 VVPLPAAPELAGIVKGLAKSGDLVVCLGAGNITQWAYALPGELNALG 467 >ref|YP_001242001.1| UDP-N-acetylmuramate--L-alanine ligase [Bradyrhizobium sp. BTAi1] sp|A5EPK1.1|MURC_BRASB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase gb|ABQ38095.1| UDP-N-acetylmuramate--L-alanine ligase [Bradyrhizobium sp. BTAi1] Length = 467 Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/467 (85%), Positives = 431/467 (92%) Query: 1 MRLPREIGPIHFVGIGGIGMSGIAEVLINLGYTVQGSDASDNYNLDRLRKKGAKVSVGHA 60 MRLPREIGPIHFVGIGGIGMSGIAEVL NLGYTVQGSDASDN N+ RLR+KG VSVGH Sbjct: 1 MRLPREIGPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASDNANVARLREKGITVSVGHK 60 Query: 61 AENVDGADVVVVSTAIKRDNPELMAARARRIPVVRRAEMLAELMRLKSCVAIAGTHGKTT 120 AENV GADVVVVSTAIKRDNPELM ARA+RIPVVRRAEMLAELMRLKSCVAIAGTHGKTT Sbjct: 61 AENVAGADVVVVSTAIKRDNPELMTARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTT 120 Query: 121 TTTMVATLLDAGGLDPTVINGGIINAYGSNARLGAGDWMVVEADESDGTFLKLPSDVVIV 180 TT+MVA LLDAGG+DPTVINGGIINAYG+NARLGAGDWMVVEADESDGTFLKLP+DV IV Sbjct: 121 TTSMVAALLDAGGIDPTVINGGIINAYGTNARLGAGDWMVVEADESDGTFLKLPADVAIV 180 Query: 181 TNIDPEHLDHFKTFEAIQDAFRNFVENVPFYGFAVMCTDHPVVQALVGKIEDRRIITYGQ 240 TN+DPEHLDHFKTF+A+QDAFR FVENVPFYGFAVMC DHPVVQALVGKIEDRRIITYG Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRAFVENVPFYGFAVMCIDHPVVQALVGKIEDRRIITYGV 240 Query: 241 NPQADAQLKDLTPTGGGSKFSVAIRDRKSGAVHEIADIMLPMPGRHNASNATAAIAVAHQ 300 NPQAD +L DL+P G S+F V RDRKSGA HEI+DI LPMPGRHNASNATAAIAVAH+ Sbjct: 241 NPQADVRLVDLSPANGSSRFKVVFRDRKSGATHEISDITLPMPGRHNASNATAAIAVAHE 300 Query: 301 LGVSDDVIRQAMSGFGGVKRRFTKTGETNGITVIDDYGHHPVEIAAVLKAARESVNGKIV 360 LG+SD+ IR+A++GFGGVKRRFT+TGE NG+T+IDDYGHHPVEIAAVLKAARES +GK++ Sbjct: 301 LGISDEAIRKAIAGFGGVKRRFTRTGEWNGVTIIDDYGHHPVEIAAVLKAARESTSGKVI 360 Query: 361 AVVQPHRYTRLQSLFEEFCTCFNDADAVVVAEVYPAGEAPIAGIDRDHFAAGLRAHGHRN 420 AVVQPHRYTRLQSLFEEFCTCFNDADAV+VA+VYPAGEAPI GIDRDHF GLRAHGHR+ Sbjct: 361 AVVQPHRYTRLQSLFEEFCTCFNDADAVIVADVYPAGEAPIEGIDRDHFVLGLRAHGHRD 420 Query: 421 VVPLPNAGELAKIVHGLAKPGDLVVCLGAGNITQWAYALPGELKALG 467 V+PLP A +LA IV LAK GDLVVCLGAGNITQWAYALP ELKALG Sbjct: 421 VLPLPQAADLAGIVKRLAKSGDLVVCLGAGNITQWAYALPNELKALG 467 >ref|YP_004108169.1| UDP-N-acetylmuramate/alanine ligase [Rhodopseudomonas palustris DX-1] gb|ADU43436.1| UDP-N-acetylmuramate/alanine ligase [Rhodopseudomonas palustris DX-1] Length = 468 Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/467 (84%), Positives = 434/467 (92%) Query: 1 MRLPREIGPIHFVGIGGIGMSGIAEVLINLGYTVQGSDASDNYNLDRLRKKGAKVSVGHA 60 MRLPREIGPIHFVGIGGIGMSGIAEVL NLGYTVQGSDAS++ N++RLR KG ++ VGH Sbjct: 1 MRLPREIGPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASESANVNRLRDKGIQIHVGHQ 60 Query: 61 AENVDGADVVVVSTAIKRDNPELMAARARRIPVVRRAEMLAELMRLKSCVAIAGTHGKTT 120 A+N+ GADV+VVSTAIKRDNPEL+AARA+RIPVVRRAEMLAELMRLKSCVAIAGTHGKTT Sbjct: 61 ADNIKGADVLVVSTAIKRDNPELLAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTT 120 Query: 121 TTTMVATLLDAGGLDPTVINGGIINAYGSNARLGAGDWMVVEADESDGTFLKLPSDVVIV 180 TT+MVA LLDAG LDPTVINGGIINAYG+NARLGAGDWMVVEADESDGTFLKLP+DV IV Sbjct: 121 TTSMVAALLDAGDLDPTVINGGIINAYGTNARLGAGDWMVVEADESDGTFLKLPADVAIV 180 Query: 181 TNIDPEHLDHFKTFEAIQDAFRNFVENVPFYGFAVMCTDHPVVQALVGKIEDRRIITYGQ 240 TN+DPEHLDHFKTF+A+QDAFRNFVENVPFYGFAVMC DHPVVQ LVGKIEDRRIITYG+ Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRNFVENVPFYGFAVMCIDHPVVQTLVGKIEDRRIITYGE 240 Query: 241 NPQADAQLKDLTPTGGGSKFSVAIRDRKSGAVHEIADIMLPMPGRHNASNATAAIAVAHQ 300 NPQADA+L DLTP+GGGS F VA RDRK+G HEIAD+MLPMPGRHNA NATAAIAVAH+ Sbjct: 241 NPQADARLLDLTPSGGGSTFKVAFRDRKAGTAHEIADLMLPMPGRHNALNATAAIAVAHE 300 Query: 301 LGVSDDVIRQAMSGFGGVKRRFTKTGETNGITVIDDYGHHPVEIAAVLKAARESVNGKIV 360 LG+SDD IR+A++ FGGV+RRFTKTGE NG+T+IDDYGHHPVEIAAVLKAAR+S GK++ Sbjct: 301 LGLSDDTIRKALAAFGGVRRRFTKTGEWNGVTIIDDYGHHPVEIAAVLKAARQSTAGKVI 360 Query: 361 AVVQPHRYTRLQSLFEEFCTCFNDADAVVVAEVYPAGEAPIAGIDRDHFAAGLRAHGHRN 420 AVVQPHR+TRLQSLFEEFCTCFNDADAV+VA+VYPAGEAPIAGIDRDHF GLRAHGHR+ Sbjct: 361 AVVQPHRFTRLQSLFEEFCTCFNDADAVIVADVYPAGEAPIAGIDRDHFVLGLRAHGHRD 420 Query: 421 VVPLPNAGELAKIVHGLAKPGDLVVCLGAGNITQWAYALPGELKALG 467 VVPL ++ LA +V GLA+ GD VVCLGAGNITQWAYALPGELKALG Sbjct: 421 VVPLQDSASLAGVVAGLARSGDYVVCLGAGNITQWAYALPGELKALG 467 >ref|YP_001207545.1| UDP-N-acetylmuramate--L-alanine ligase [Bradyrhizobium sp. ORS 278] sp|A4YZK2.1|MURC_BRASO RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase emb|CAL79328.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme [Bradyrhizobium sp. ORS 278] Length = 467 Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/467 (87%), Positives = 432/467 (92%) Query: 1 MRLPREIGPIHFVGIGGIGMSGIAEVLINLGYTVQGSDASDNYNLDRLRKKGAKVSVGHA 60 MRLPREIGPIHFVGIGGIGMSGIAEVL NLGYTVQGSDASDN N+ RLR+KG VSVGH Sbjct: 1 MRLPREIGPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASDNANVARLREKGITVSVGHK 60 Query: 61 AENVDGADVVVVSTAIKRDNPELMAARARRIPVVRRAEMLAELMRLKSCVAIAGTHGKTT 120 AENV GADVVVVSTAIKRDNPELMAARA+RIPVVRRAEMLAELMRLKSCVAIAGTHGKTT Sbjct: 61 AENVAGADVVVVSTAIKRDNPELMAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTT 120 Query: 121 TTTMVATLLDAGGLDPTVINGGIINAYGSNARLGAGDWMVVEADESDGTFLKLPSDVVIV 180 TT+MVA LLDAGGLDPTVINGGIINAYG+NARLG G+WMVVEADESDGTFLKLP+DV IV Sbjct: 121 TTSMVAALLDAGGLDPTVINGGIINAYGTNARLGGGEWMVVEADESDGTFLKLPADVAIV 180 Query: 181 TNIDPEHLDHFKTFEAIQDAFRNFVENVPFYGFAVMCTDHPVVQALVGKIEDRRIITYGQ 240 TN+DPEHLDHFKTFEA+QDAFR FVENVPFYGFAVMC DHPVVQALVGKIEDRRIITYG Sbjct: 181 TNVDPEHLDHFKTFEAVQDAFRAFVENVPFYGFAVMCIDHPVVQALVGKIEDRRIITYGV 240 Query: 241 NPQADAQLKDLTPTGGGSKFSVAIRDRKSGAVHEIADIMLPMPGRHNASNATAAIAVAHQ 300 NPQAD +L DLTP GGGS F V RDRKSGA HEI+DI+LPMPGRHNASNATAAIAVA + Sbjct: 241 NPQADVRLVDLTPMGGGSSFKVVFRDRKSGATHEISDIVLPMPGRHNASNATAAIAVARE 300 Query: 301 LGVSDDVIRQAMSGFGGVKRRFTKTGETNGITVIDDYGHHPVEIAAVLKAARESVNGKIV 360 LG+SD+ IR+A+ GFGGVKRRFT+TGE NG+TVIDDYGHHPVEIAAVLKAARES NGK+V Sbjct: 301 LGLSDEAIRKAIGGFGGVKRRFTRTGEWNGVTVIDDYGHHPVEIAAVLKAARESSNGKVV 360 Query: 361 AVVQPHRYTRLQSLFEEFCTCFNDADAVVVAEVYPAGEAPIAGIDRDHFAAGLRAHGHRN 420 AVVQPHRYTRLQSLFEEFCTCFNDADAVVVA+VYPAGEAPI GIDRDHF GLRAHGHR+ Sbjct: 361 AVVQPHRYTRLQSLFEEFCTCFNDADAVVVADVYPAGEAPIEGIDRDHFVLGLRAHGHRD 420 Query: 421 VVPLPNAGELAKIVHGLAKPGDLVVCLGAGNITQWAYALPGELKALG 467 V+PLP A +LA IV LAKPGDLVVCLGAGNITQWAYALP ELKALG Sbjct: 421 VLPLPKAADLAGIVKDLAKPGDLVVCLGAGNITQWAYALPNELKALG 467 >ref|YP_485615.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris HaA2] sp|Q2IYK6.1|MURC_RHOP2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase gb|ABD06704.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris HaA2] Length = 468 Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/467 (82%), Positives = 432/467 (92%) Query: 1 MRLPREIGPIHFVGIGGIGMSGIAEVLINLGYTVQGSDASDNYNLDRLRKKGAKVSVGHA 60 MRLPREIGPIHFVGIGGIGMSGIAEVL NLGYTVQGSDAS++ N+ RLR+KG ++ VGH Sbjct: 1 MRLPREIGPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASESANVSRLREKGIQIHVGHK 60 Query: 61 AENVDGADVVVVSTAIKRDNPELMAARARRIPVVRRAEMLAELMRLKSCVAIAGTHGKTT 120 A+NV GADV+VVSTAIKRDNPEL+AARA+RIPVVRRAEMLAELMRLKSCVAIAGTHGKTT Sbjct: 61 ADNVAGADVLVVSTAIKRDNPELLAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTT 120 Query: 121 TTTMVATLLDAGGLDPTVINGGIINAYGSNARLGAGDWMVVEADESDGTFLKLPSDVVIV 180 TT+MVA LLDAG DPTVINGGIINAYG+NARLGAGDWMVVEADESDGTFLKLP+DV IV Sbjct: 121 TTSMVAALLDAGDFDPTVINGGIINAYGTNARLGAGDWMVVEADESDGTFLKLPADVAIV 180 Query: 181 TNIDPEHLDHFKTFEAIQDAFRNFVENVPFYGFAVMCTDHPVVQALVGKIEDRRIITYGQ 240 TN+DPEHLDHFKTF+A+QDAFRNFVENVPFYGFAVMC DHPVVQALVGKIEDRRIITYG+ Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRNFVENVPFYGFAVMCIDHPVVQALVGKIEDRRIITYGE 240 Query: 241 NPQADAQLKDLTPTGGGSKFSVAIRDRKSGAVHEIADIMLPMPGRHNASNATAAIAVAHQ 300 NPQADA+L +L P+G GS F VA RDRK+G HEIA++MLPMPGRHNA NATAAIAVAH+ Sbjct: 241 NPQADARLLELKPSGSGSTFKVAFRDRKAGTAHEIAELMLPMPGRHNALNATAAIAVAHE 300 Query: 301 LGVSDDVIRQAMSGFGGVKRRFTKTGETNGITVIDDYGHHPVEIAAVLKAARESVNGKIV 360 LG+SDD IR+A++ FGGV+RRFTKTG+ NG+T+IDDYGHHPVEIAAVLKAAR+S +G+++ Sbjct: 301 LGLSDDTIRKALAAFGGVRRRFTKTGDWNGVTIIDDYGHHPVEIAAVLKAARQSTDGRVI 360 Query: 361 AVVQPHRYTRLQSLFEEFCTCFNDADAVVVAEVYPAGEAPIAGIDRDHFAAGLRAHGHRN 420 AVVQPHR+TRLQSLFEEFCTCFNDAD+V+VA+VYPAGEAPI GIDRDHF GLRAHGHRN Sbjct: 361 AVVQPHRFTRLQSLFEEFCTCFNDADSVIVADVYPAGEAPIQGIDRDHFVLGLRAHGHRN 420 Query: 421 VVPLPNAGELAKIVHGLAKPGDLVVCLGAGNITQWAYALPGELKALG 467 V+PL ++ LA +V G+AK GD VVCLGAGNITQWAYALPGELKALG Sbjct: 421 VIPLQDSASLAGVVAGVAKSGDYVVCLGAGNITQWAYALPGELKALG 467