BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0073.0002.p         (116 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001238422.1| hypothetical protein BBta_2344 [Bradyrhizobi...   194   3e-48
ref|YP_001204112.1| hypothetical protein BRADO2018 [Bradyrhizobi...   189   1e-46
ref|NP_769162.1| hypothetical protein blr2522 [Bradyrhizobium ja...   181   5e-44
ref|YP_578415.1| hypothetical protein Nham_3220 [Nitrobacter ham...   177   4e-43
ref|YP_001990242.1| hypothetical protein Rpal_1227 [Rhodopseudom...   173   6e-42

>ref|YP_001238422.1| hypothetical protein BBta_2344 [Bradyrhizobium sp. BTAi1]
 gb|ABQ34516.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 502

 Score =  194 bits (493), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 91/115 (79%), Positives = 104/115 (90%)

Query: 1   MGRFFDDSYERRTNQRLRAVAGDPELASLIAMNRRRPHLLLDATPQRTPWLSVAKFNETG 60
           + RFF +S+ERRTNQ+L+AVAGDP+LASLIA+ RRR HL LDATPQRTPW+S A+F ETG
Sbjct: 387 ISRFFVESFERRTNQKLQAVAGDPQLASLIALGRRRAHLFLDATPQRTPWISPARFAETG 446

Query: 61  GVVVWRAQDTAGTPPPDIAQRFPGLVPEVPRSFDRLVNGRQPVLRIGWAIVRPKG 115
           GVVVWRA DT GTPPP++AQRFPGLVPEVPRSFD L+NGRQP+LRIGWAIVRPK 
Sbjct: 447 GVVVWRASDTVGTPPPELAQRFPGLVPEVPRSFDWLINGRQPLLRIGWAIVRPKA 501


>ref|YP_001204112.1| hypothetical protein BRADO2018 [Bradyrhizobium sp. ORS 278]
 emb|CAL75875.1| conserved hypothetical protein; putative membrane protein
           [Bradyrhizobium sp. ORS 278]
          Length = 502

 Score =  189 bits (481), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 86/116 (74%), Positives = 104/116 (89%)

Query: 1   MGRFFDDSYERRTNQRLRAVAGDPELASLIAMNRRRPHLLLDATPQRTPWLSVAKFNETG 60
           + RFF +S+ERRTNQRL+AVAGDP+LASL+A+ RRR HL LDA PQRTPW++ A+F E+G
Sbjct: 387 ISRFFVESFERRTNQRLQAVAGDPQLASLVALGRRRAHLFLDAMPQRTPWITPARFAESG 446

Query: 61  GVVVWRAQDTAGTPPPDIAQRFPGLVPEVPRSFDRLVNGRQPVLRIGWAIVRPKGT 116
           G+VVWRA DTAGTPPP++ +RFPGL+PEVPR FD L+NGRQPVLRIGWAIVRPKG+
Sbjct: 447 GIVVWRASDTAGTPPPELTRRFPGLIPEVPRGFDWLINGRQPVLRIGWAIVRPKGS 502


>ref|NP_769162.1| hypothetical protein blr2522 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47787.1| blr2522 [Bradyrhizobium japonicum USDA 110]
          Length = 502

 Score =  181 bits (458), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 84/112 (75%), Positives = 98/112 (87%)

Query: 4   FFDDSYERRTNQRLRAVAGDPELASLIAMNRRRPHLLLDATPQRTPWLSVAKFNETGGVV 63
           FFDDS+ RRTN RLRAVAG+ +LASLIA++  RPHL +DA P RTPW++ AKF+ETGGVV
Sbjct: 390 FFDDSFARRTNHRLRAVAGETQLASLIALHSGRPHLFIDAEPARTPWINQAKFSETGGVV 449

Query: 64  VWRAQDTAGTPPPDIAQRFPGLVPEVPRSFDRLVNGRQPVLRIGWAIVRPKG 115
           VWRA DTAGTPPPDI +RFPG+VPEVPR+F+ LV GRQ +LRIGWAIVRPKG
Sbjct: 450 VWRAADTAGTPPPDILKRFPGIVPEVPRAFEWLVTGRQQLLRIGWAIVRPKG 501


>ref|YP_578415.1| hypothetical protein Nham_3220 [Nitrobacter hamburgensis X14]
 gb|ABE63955.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 502

 Score =  177 bits (449), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 81/115 (70%), Positives = 100/115 (86%)

Query: 1   MGRFFDDSYERRTNQRLRAVAGDPELASLIAMNRRRPHLLLDATPQRTPWLSVAKFNETG 60
           +GRFF +++ERRTN+ L+AVAGDP+LA+L+A+   RPHLLLDA P+RTPW++ A+FNE G
Sbjct: 387 IGRFFGENFERRTNRPLQAVAGDPQLAALVALGPSRPHLLLDAAPERTPWMTFARFNELG 446

Query: 61  GVVVWRAQDTAGTPPPDIAQRFPGLVPEVPRSFDRLVNGRQPVLRIGWAIVRPKG 115
           GVVVWRA DTAGTPP  IA+RFPG+VPE+PR+F+RLVNGR P LRIGWAIVRP  
Sbjct: 447 GVVVWRASDTAGTPPEAIAKRFPGIVPEIPRAFERLVNGRLPSLRIGWAIVRPTA 501


>ref|YP_001990242.1| hypothetical protein Rpal_1227 [Rhodopseudomonas palustris TIE-1]
 gb|ACE99766.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 502

 Score =  173 bits (439), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 81/114 (71%), Positives = 96/114 (84%)

Query: 1   MGRFFDDSYERRTNQRLRAVAGDPELASLIAMNRRRPHLLLDATPQRTPWLSVAKFNETG 60
           M +FF DS+ERRT + L AVAGDP+LASLIA+   RPHL LDATP RTPW+++  F+  G
Sbjct: 387 MAQFFADSFERRTGKPLPAVAGDPQLASLIALAPSRPHLFLDATPARTPWVTLGDFDRNG 446

Query: 61  GVVVWRAQDTAGTPPPDIAQRFPGLVPEVPRSFDRLVNGRQPVLRIGWAIVRPK 114
           GVVVWRA DTAG PP DIAQRFPG+VPE+PR FDR+++GRQP+LRIGWAIVRPK
Sbjct: 447 GVVVWRAADTAGKPPDDIAQRFPGIVPELPRGFDRMISGRQPLLRIGWAIVRPK 500