BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0158.p (466 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001204741.1| hypothetical protein BRADO2689 [Bradyrhizobi... 824 0.0 ref|ZP_08629248.1| acetylornithine deacetylase [Bradyrhizobiacea... 821 0.0 ref|NP_769704.1| hypothetical protein blr3064 [Bradyrhizobium ja... 809 0.0 ref|ZP_01046551.1| hypothetical protein NB311A_18021 [Nitrobacte... 807 0.0 ref|YP_780789.1| hypothetical protein RPE_1861 [Rhodopseudomonas... 807 0.0 >ref|YP_001204741.1| hypothetical protein BRADO2689 [Bradyrhizobium sp. ORS 278] emb|CAL76504.1| putative Peptidase, M20/M25/M40 family [Bradyrhizobium sp. ORS 278] Length = 467 Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/464 (84%), Positives = 428/464 (92%) Query: 1 MSNAKLQPVLDRIDADFDNSLARLFTLLRIKSISADPAFADDCKAAADHLAKDIATLGFK 60 M+NA+LQ VLD IDADFDNSL RLF L+RIKSISADPAF DDCKAAADHLAKD+ATLGF Sbjct: 1 MANAQLQSVLDHIDADFDNSLDRLFQLIRIKSISADPAFTDDCKAAADHLAKDLATLGFA 60 Query: 61 TEVRPTAGHPAVVGKLNGSTDGRPHVLFYGHYDVQPVDPLNLWHRPPFEPVVTDHADGRK 120 TEVRPTAGHPAVVGK NG +PHVLFYGHYDVQPVDPL+LWHRPPFEPVVTDHADGRK Sbjct: 61 TEVRPTAGHPAVVGKSNGHGAAKPHVLFYGHYDVQPVDPLDLWHRPPFEPVVTDHADGRK 120 Query: 121 IIVARGAEDDKGQLMTFVEACRAWKTVTGSLPVDITIVIEGEEEIGSKNFVPFLEANKDD 180 IIVARGAEDDKGQLMTFVEACRAWK VTGSLP+ IT++IEGEEE+GSKNFVPFLEANKD+ Sbjct: 121 IIVARGAEDDKGQLMTFVEACRAWKKVTGSLPLGITMLIEGEEEVGSKNFVPFLEANKDE 180 Query: 181 LKADFALVCDTGMWDPNTPAITTSLRGLVYDEVKIKAANRDLHSGVFGGGAQNPIRVLTR 240 KADFALVCDTGMWDPNTPAITTSLRGL+Y+E+KIKAANRDLHSGVFGGGA+NPIRVLT Sbjct: 181 FKADFALVCDTGMWDPNTPAITTSLRGLLYEELKIKAANRDLHSGVFGGGARNPIRVLTE 240 Query: 241 ILGGLHDENGHITIPGFYDGVKDLPPDILAQWKQLNLTPESFLKPIGLSVPAGEKDRLLI 300 +LGGL D +G ITIPGFYDGVKD+PP++L QWK+LNLTPESFLKPIGLS+PAGEKDRLLI Sbjct: 241 VLGGLFDADGRITIPGFYDGVKDVPPEVLEQWKKLNLTPESFLKPIGLSIPAGEKDRLLI 300 Query: 301 EQVSSRPTCDINGIVGGYTGEGSKTVIAAEASAKVSFRLVEGQDPEKIRKAFRDYVKARL 360 EQ+SSRPTCDINGI GGY GEGSKTVI + A AKVSFRLVEGQDP KIRKAFRDYV AR+ Sbjct: 301 EQISSRPTCDINGIWGGYIGEGSKTVIPSLAHAKVSFRLVEGQDPLKIRKAFRDYVSARI 360 Query: 361 PADCKAEFTDHSSAPAIALDWNMKPLAAARRALTDEWGKEALLIGSGASIPIVADFKHTL 420 P DC EF DHS+ AIALDW+MKPLAAA++ALT+EWGKE +L+GSGASIPIV DFK TL Sbjct: 361 PGDCSVEFGDHSAGAAIALDWSMKPLAAAKQALTEEWGKETILMGSGASIPIVTDFKKTL 420 Query: 421 GLDSVLIGFGLDDDNIHSPNEKYDLKSYHKGIRSWARILAAFAE 464 GLDS+L+GFGLDDDNIHSPNEKYDLKSYHKGIRSWARILAA AE Sbjct: 421 GLDSLLVGFGLDDDNIHSPNEKYDLKSYHKGIRSWARILAALAE 464 >ref|ZP_08629248.1| acetylornithine deacetylase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07741.1| acetylornithine deacetylase [Bradyrhizobiaceae bacterium SG-6C] Length = 466 Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/461 (85%), Positives = 427/461 (92%), Gaps = 2/461 (0%) Query: 5 KLQPVLDRIDADFDNSLARLFTLLRIKSISADPAFADDCKAAADHLAKDIATLGFKTEVR 64 +L VLDRI+ DFD SL RLFTLLRIKSISADPAF +DC+ AADHLA DIA++GF EVR Sbjct: 6 QLAAVLDRINKDFDKSLERLFTLLRIKSISADPAFTEDCRKAADHLAADIASIGFTAEVR 65 Query: 65 PTAGHPAVVGKLNGSTDGRPHVLFYGHYDVQPVDPLNLWHRPPFEPVVTDHADGRKIIVA 124 PTAGHPA+VGK NG HVLFYGHYDVQPVDPL+LWHRPPFEP+VTDHADGRKIIVA Sbjct: 66 PTAGHPAIVGKSNGKAGA--HVLFYGHYDVQPVDPLDLWHRPPFEPIVTDHADGRKIIVA 123 Query: 125 RGAEDDKGQLMTFVEACRAWKTVTGSLPVDITIVIEGEEEIGSKNFVPFLEANKDDLKAD 184 RGAEDDKGQLMTFVEACRAWK VTGSLP+++TI+IEGEEEIGSKNF PFL+ NK DL AD Sbjct: 124 RGAEDDKGQLMTFVEACRAWKNVTGSLPLNVTILIEGEEEIGSKNFGPFLDKNKKDLAAD 183 Query: 185 FALVCDTGMWDPNTPAITTSLRGLVYDEVKIKAANRDLHSGVFGGGAQNPIRVLTRILGG 244 F LVCDTGMWD NTPAITTSLRGLVYDEV+IKAANRDLHSG+FGGGAQNPIRVLTRILG Sbjct: 184 FVLVCDTGMWDQNTPAITTSLRGLVYDEVRIKAANRDLHSGIFGGGAQNPIRVLTRILGS 243 Query: 245 LHDENGHITIPGFYDGVKDLPPDILAQWKQLNLTPESFLKPIGLSVPAGEKDRLLIEQVS 304 +HD+NG ITIPGFYDGVKDLPPDILAQWK LNL+PE+FLKPIGLSVPAGEKDRLLIEQVS Sbjct: 244 IHDDNGRITIPGFYDGVKDLPPDILAQWKGLNLSPETFLKPIGLSVPAGEKDRLLIEQVS 303 Query: 305 SRPTCDINGIVGGYTGEGSKTVIAAEASAKVSFRLVEGQDPEKIRKAFRDYVKARLPADC 364 SRPTCDINGIVGGYTGEGSKTVI AEASAKVSFRLVEGQDPE+IRKAFRD+V +RLPADC Sbjct: 304 SRPTCDINGIVGGYTGEGSKTVIPAEASAKVSFRLVEGQDPERIRKAFRDFVTSRLPADC 363 Query: 365 KAEFTDHSSAPAIALDWNMKPLAAARRALTDEWGKEALLIGSGASIPIVADFKHTLGLDS 424 AEF DH+ APAIALDW MKPLAAA++ALTDEWGK+ALLIGSGASIPIVADFK TLGLD+ Sbjct: 364 TAEFIDHAGAPAIALDWGMKPLAAAKQALTDEWGKDALLIGSGASIPIVADFKKTLGLDT 423 Query: 425 VLIGFGLDDDNIHSPNEKYDLKSYHKGIRSWARILAAFAEA 465 VLIGFGL+DDNIHSPNEKYDLKS+HKGIRSWARILAAFA+A Sbjct: 424 VLIGFGLEDDNIHSPNEKYDLKSFHKGIRSWARILAAFADA 464 >ref|NP_769704.1| hypothetical protein blr3064 [Bradyrhizobium japonicum USDA 110] dbj|BAC48329.1| succinyl-diaminopimelate desuccinylase [Bradyrhizobium japonicum USDA 110] Length = 464 Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/466 (82%), Positives = 423/466 (90%), Gaps = 2/466 (0%) Query: 1 MSNAKLQPVLDRIDADFDNSLARLFTLLRIKSISADPAFADDCKAAADHLAKDIATLGFK 60 M+NA+LQ VLD ID DFDNSL RLF+LLRIKSISADPAFA+DCKAAA+HLAKDIA+LG Sbjct: 1 MANAQLQSVLDHIDKDFDNSLERLFSLLRIKSISADPAFANDCKAAAEHLAKDIASLGVA 60 Query: 61 TEVRPTAGHPAVVGKLNGSTDGRPHVLFYGHYDVQPVDPLNLWHRPPFEPVVTDHADGRK 120 TEVRPTAGHPA+VGK GRPHV+FYGHYDVQPVDPL+LWHRPPFEP VTDHADGRK Sbjct: 61 TEVRPTAGHPAIVGKTGAG--GRPHVIFYGHYDVQPVDPLDLWHRPPFEPAVTDHADGRK 118 Query: 121 IIVARGAEDDKGQLMTFVEACRAWKTVTGSLPVDITIVIEGEEEIGSKNFVPFLEANKDD 180 IIVARGAEDDKGQ+MTFVEACRAWK VTGSLP+D+T +IEGEEE+GSKNFVPF+EANKD+ Sbjct: 119 IIVARGAEDDKGQVMTFVEACRAWKKVTGSLPIDVTFLIEGEEEVGSKNFVPFIEANKDE 178 Query: 181 LKADFALVCDTGMWDPNTPAITTSLRGLVYDEVKIKAANRDLHSGVFGGGAQNPIRVLTR 240 KAD+ LVCDTGMWD NTPAITTSLRGL+Y+E+KI AANRDLHSGVFGG A NPIRVLT+ Sbjct: 179 FKADYVLVCDTGMWDRNTPAITTSLRGLLYEELKITAANRDLHSGVFGGSAMNPIRVLTK 238 Query: 241 ILGGLHDENGHITIPGFYDGVKDLPPDILAQWKQLNLTPESFLKPIGLSVPAGEKDRLLI 300 ILGGL D++ ITIPGFYDGVKDLPPDIL QWK+LNLTPE FLKPIGLS+PAGEK RLLI Sbjct: 239 ILGGLFDDDNRITIPGFYDGVKDLPPDILEQWKKLNLTPEMFLKPIGLSIPAGEKGRLLI 298 Query: 301 EQVSSRPTCDINGIVGGYTGEGSKTVIAAEASAKVSFRLVEGQDPEKIRKAFRDYVKARL 360 EQ SSRPTCD+NGI GGY GEGSKTVI + ASAKVSFRLVEGQDP KIRKAFRDYV ARL Sbjct: 299 EQASSRPTCDVNGIWGGYIGEGSKTVIPSHASAKVSFRLVEGQDPAKIRKAFRDYVTARL 358 Query: 361 PADCKAEFTDHSSAPAIALDWNMKPLAAARRALTDEWGKEALLIGSGASIPIVADFKHTL 420 P DCK EF DHS+APA+ALDWNMKPLAAA +ALT+EWGKE +L+GSGASIPIVADFK TL Sbjct: 359 PGDCKVEFGDHSAAPAVALDWNMKPLAAASKALTEEWGKETVLMGSGASIPIVADFKRTL 418 Query: 421 GLDSVLIGFGLDDDNIHSPNEKYDLKSYHKGIRSWARILAAFAEAK 466 GLDS+L+GFGLDDDNIHSPNEKYDL+S+ KGIRSWARILAA AE K Sbjct: 419 GLDSLLVGFGLDDDNIHSPNEKYDLRSFQKGIRSWARILAALAEVK 464 >ref|ZP_01046551.1| hypothetical protein NB311A_18021 [Nitrobacter sp. Nb-311A] gb|EAQ35387.1| hypothetical protein NB311A_18021 [Nitrobacter sp. Nb-311A] Length = 468 Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/463 (83%), Positives = 421/463 (90%) Query: 3 NAKLQPVLDRIDADFDNSLARLFTLLRIKSISADPAFADDCKAAADHLAKDIATLGFKTE 62 ++LQ VLD IDADFDNSL RLF LLRIKSISADPAF +DCKAAADHLA DIATL F E Sbjct: 4 TSQLQTVLDHIDADFDNSLERLFALLRIKSISADPAFINDCKAAADHLAADIATLDFAAE 63 Query: 63 VRPTAGHPAVVGKLNGSTDGRPHVLFYGHYDVQPVDPLNLWHRPPFEPVVTDHADGRKII 122 VRPT GHPA+V K NG+T RPHVLFYGHYDVQP DPLNLWHRPPF+PVVT HADGRKII Sbjct: 64 VRPTEGHPAIVAKSNGNTGSRPHVLFYGHYDVQPADPLNLWHRPPFDPVVTSHADGRKII 123 Query: 123 VARGAEDDKGQLMTFVEACRAWKTVTGSLPVDITIVIEGEEEIGSKNFVPFLEANKDDLK 182 VARGAEDDKGQLMTFVEACRAW +VTGSLP+D+TI+IEGEEE+GSKNFVPFLE NK DL Sbjct: 124 VARGAEDDKGQLMTFVEACRAWMSVTGSLPLDVTILIEGEEEVGSKNFVPFLERNKKDLA 183 Query: 183 ADFALVCDTGMWDPNTPAITTSLRGLVYDEVKIKAANRDLHSGVFGGGAQNPIRVLTRIL 242 ADFALVCDTGMWDP+TPAITTSLRGLVY+EV IKAANRDLHSG+FGGGAQNPIRVLTRIL Sbjct: 184 ADFALVCDTGMWDPDTPAITTSLRGLVYEEVIIKAANRDLHSGLFGGGAQNPIRVLTRIL 243 Query: 243 GGLHDENGHITIPGFYDGVKDLPPDILAQWKQLNLTPESFLKPIGLSVPAGEKDRLLIEQ 302 GGLHD++G I IPGFYDGVKDLP DI AQW +L+LTP+ FLKPIGLS+PAGEKDRLLIEQ Sbjct: 244 GGLHDDDGRIAIPGFYDGVKDLPSDIRAQWAKLDLTPDRFLKPIGLSIPAGEKDRLLIEQ 303 Query: 303 VSSRPTCDINGIVGGYTGEGSKTVIAAEASAKVSFRLVEGQDPEKIRKAFRDYVKARLPA 362 + SRPTCDINGIVGGYTGEGSKTVI A+ASAK+SFRLVEGQ+P KIR AFR +VK R+PA Sbjct: 304 LLSRPTCDINGIVGGYTGEGSKTVIPAQASAKISFRLVEGQEPGKIRDAFRAFVKERVPA 363 Query: 363 DCKAEFTDHSSAPAIALDWNMKPLAAARRALTDEWGKEALLIGSGASIPIVADFKHTLGL 422 DC EF DH+ APAIALDWNMKPLAAA++ALTDEW KEALLIG GASIPIVADFK +LGL Sbjct: 364 DCSVEFLDHAGAPAIALDWNMKPLAAAKQALTDEWNKEALLIGCGASIPIVADFKTSLGL 423 Query: 423 DSVLIGFGLDDDNIHSPNEKYDLKSYHKGIRSWARILAAFAEA 465 D+VL+GFGLDDDNIHSPNEKYDLKS+HKGIRSWARILAA AEA Sbjct: 424 DTVLVGFGLDDDNIHSPNEKYDLKSFHKGIRSWARILAALAEA 466 >ref|YP_780789.1| hypothetical protein RPE_1861 [Rhodopseudomonas palustris BisA53] gb|ABJ05809.1| peptidase M20 [Rhodopseudomonas palustris BisA53] Length = 467 Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/464 (82%), Positives = 417/464 (89%) Query: 3 NAKLQPVLDRIDADFDNSLARLFTLLRIKSISADPAFADDCKAAADHLAKDIATLGFKTE 62 ++LQ VLDR+DAD D+SL RLF LLRIKSISADPAFA DC+AAADHLA +IA LGF E Sbjct: 4 TSQLQSVLDRVDADLDHSLERLFALLRIKSISADPAFAGDCRAAADHLAVEIAALGFDAE 63 Query: 63 VRPTAGHPAVVGKLNGSTDGRPHVLFYGHYDVQPVDPLNLWHRPPFEPVVTDHADGRKII 122 VRPTAGHPAVV G+ RPH LFYGHYDVQPVDPL LWHRPPFEPV+ DHADGRKII Sbjct: 64 VRPTAGHPAVVATCRGNRGNRPHALFYGHYDVQPVDPLELWHRPPFEPVIADHADGRKII 123 Query: 123 VARGAEDDKGQLMTFVEACRAWKTVTGSLPVDITIVIEGEEEIGSKNFVPFLEANKDDLK 182 VARGAEDDKGQL TFVEACRAWK V G LP+D+TIV+EGEEE+GSKNFVPFL+ +K DL Sbjct: 124 VARGAEDDKGQLSTFVEACRAWKEVAGGLPIDLTIVLEGEEEVGSKNFVPFLQQHKQDLA 183 Query: 183 ADFALVCDTGMWDPNTPAITTSLRGLVYDEVKIKAANRDLHSGVFGGGAQNPIRVLTRIL 242 ADFALVCDTGMWDP TPAITTSLRGLVY+EVKIKAANRDLHSG++GGGAQNPIRVLTRIL Sbjct: 184 ADFALVCDTGMWDPKTPAITTSLRGLVYEEVKIKAANRDLHSGIYGGGAQNPIRVLTRIL 243 Query: 243 GGLHDENGHITIPGFYDGVKDLPPDILAQWKQLNLTPESFLKPIGLSVPAGEKDRLLIEQ 302 GGLH + GHITIPGFYDGVK++P D+LAQWK LNLT ESFLKPIGLSVPAGE DRLLIEQ Sbjct: 244 GGLHTDAGHITIPGFYDGVKEVPADVLAQWKTLNLTAESFLKPIGLSVPAGETDRLLIEQ 303 Query: 303 VSSRPTCDINGIVGGYTGEGSKTVIAAEASAKVSFRLVEGQDPEKIRKAFRDYVKARLPA 362 +SSRPTCDINGIVGGYTGEGSKTVI AEASAKVSFRLVEGQDP KIR AFR YV ARLPA Sbjct: 304 ISSRPTCDINGIVGGYTGEGSKTVIPAEASAKVSFRLVEGQDPAKIRDAFRSYVTARLPA 363 Query: 363 DCKAEFTDHSSAPAIALDWNMKPLAAARRALTDEWGKEALLIGSGASIPIVADFKHTLGL 422 DC AEF +HS+APAIALDW MKPLAAA+RALT+EWG+EALLIGSGASIPIVADFK LG+ Sbjct: 364 DCSAEFLEHSNAPAIALDWTMKPLAAAKRALTEEWGREALLIGSGASIPIVADFKRVLGV 423 Query: 423 DSVLIGFGLDDDNIHSPNEKYDLKSYHKGIRSWARILAAFAEAK 466 D++L+GFGLDDDNIHSPNEKYDL S+HKGIRSW RILAA AEAK Sbjct: 424 DTLLVGFGLDDDNIHSPNEKYDLTSFHKGIRSWVRILAALAEAK 467