BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0072.0148.p         (143 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_577810.1| hypothetical protein Nham_2568 [Nitrobacter ham...   201   3e-50
ref|NP_769714.1| hypothetical protein blr3074 [Bradyrhizobium ja...   201   3e-50
ref|YP_318772.1| hypothetical protein Nwi_2166 [Nitrobacter wino...   200   5e-50
ref|YP_780802.1| hypothetical protein RPE_1874 [Rhodopseudomonas...   195   2e-48
ref|YP_531659.1| hypothetical protein RPC_1781 [Rhodopseudomonas...   194   3e-48

>ref|YP_577810.1| hypothetical protein Nham_2568 [Nitrobacter hamburgensis X14]
 gb|ABE63350.1| protein of unknown function DUF1491 [Nitrobacter hamburgensis X14]
          Length = 114

 Score =  201 bits (512), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 93/113 (82%), Positives = 107/113 (94%)

Query: 30  MRLKTSIWVAAYLRRCQTEGVFGAVRKKGAEEAGAVFVKVALMDGNAMLYAPAPQTVYDD 89
           MRLK+SIWVAAYLRRCQTEG+FGAVR++GAEEAGAVFVK+AL+DGNAMLYAPAPQ VYDD
Sbjct: 1   MRLKSSIWVAAYLRRCQTEGIFGAVRRRGAEEAGAVFVKLALLDGNAMLYAPAPQAVYDD 60

Query: 90  SRPVERLFVPTAPQPVSEPSVEERLTKELRFDPDAWIVETEDRAGRHFLDLAK 142
           SRPVER+F P++ +PV+E +VEERL KE+RFDPDAWIVE EDRAGRHFLDLA+
Sbjct: 61  SRPVERVFAPSSNEPVAEQAVEERLVKEVRFDPDAWIVEIEDRAGRHFLDLAR 113


>ref|NP_769714.1| hypothetical protein blr3074 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48339.1| blr3074 [Bradyrhizobium japonicum USDA 110]
          Length = 114

 Score =  201 bits (511), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 94/113 (83%), Positives = 106/113 (93%)

Query: 30  MRLKTSIWVAAYLRRCQTEGVFGAVRKKGAEEAGAVFVKVALMDGNAMLYAPAPQTVYDD 89
           MRLK++IWVAAYLRRCQ+EGVFGAVR++GAEEAGAVFVKV+L+DGNAMLY PAPQTVYDD
Sbjct: 1   MRLKSNIWVAAYLRRCQSEGVFGAVRRRGAEEAGAVFVKVSLLDGNAMLYVPAPQTVYDD 60

Query: 90  SRPVERLFVPTAPQPVSEPSVEERLTKELRFDPDAWIVETEDRAGRHFLDLAK 142
            RPV+R FVP A QP+ EP+VEERLTKE+RFD DAWIVETEDRAGRHFL+LAK
Sbjct: 61  GRPVDRFFVPVASQPLPEPAVEERLTKEIRFDSDAWIVETEDRAGRHFLELAK 113


>ref|YP_318772.1| hypothetical protein Nwi_2166 [Nitrobacter winogradskyi Nb-255]
 gb|ABA05420.1| Protein of unknown function DUF1491 [Nitrobacter winogradskyi
           Nb-255]
          Length = 131

 Score =  200 bits (509), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 96/126 (76%), Positives = 111/126 (88%), Gaps = 2/126 (1%)

Query: 20  WPRRWP--IARRMRLKTSIWVAAYLRRCQTEGVFGAVRKKGAEEAGAVFVKVALMDGNAM 77
           W RR    I   MRLK+SIWVAAYLRRCQ EGVFGAVR++GA+EAGAVFVK+AL+DGNAM
Sbjct: 6   WSRRHEARIFMSMRLKSSIWVAAYLRRCQCEGVFGAVRRRGADEAGAVFVKLALLDGNAM 65

Query: 78  LYAPAPQTVYDDSRPVERLFVPTAPQPVSEPSVEERLTKELRFDPDAWIVETEDRAGRHF 137
           LYAPAPQ VYDDSRPVER+F P++ +PV+E +VEERL KE+RFDPDAWIVE ED+AGRHF
Sbjct: 66  LYAPAPQAVYDDSRPVERVFAPSSVEPVAEQAVEERLAKEVRFDPDAWIVEIEDKAGRHF 125

Query: 138 LDLAKG 143
           LDLA+G
Sbjct: 126 LDLARG 131


>ref|YP_780802.1| hypothetical protein RPE_1874 [Rhodopseudomonas palustris BisA53]
 gb|ABJ05822.1| protein of unknown function DUF1491 [Rhodopseudomonas palustris
           BisA53]
          Length = 114

 Score =  195 bits (495), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 90/113 (79%), Positives = 101/113 (89%)

Query: 30  MRLKTSIWVAAYLRRCQTEGVFGAVRKKGAEEAGAVFVKVALMDGNAMLYAPAPQTVYDD 89
           MRLK+SIWVAAYLRRCQTEG+FGAVR++GAEEAGAVFVK+AL+DG A+LYAPAPQT Y D
Sbjct: 1   MRLKSSIWVAAYLRRCQTEGLFGAVRRRGAEEAGAVFVKIALLDGTAILYAPAPQTAYQD 60

Query: 90  SRPVERLFVPTAPQPVSEPSVEERLTKELRFDPDAWIVETEDRAGRHFLDLAK 142
            RP+ER+F PT P P+ E  VEERLTKE+RFDPD WIVE EDRAGRHFLDLAK
Sbjct: 61  ERPIERVFAPTTPAPIEEALVEERLTKEIRFDPDVWIVEIEDRAGRHFLDLAK 113


>ref|YP_531659.1| hypothetical protein RPC_1781 [Rhodopseudomonas palustris BisB18]
 gb|ABD87340.1| protein of unknown function DUF1491 [Rhodopseudomonas palustris
           BisB18]
          Length = 114

 Score =  194 bits (493), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 88/114 (77%), Positives = 104/114 (91%)

Query: 30  MRLKTSIWVAAYLRRCQTEGVFGAVRKKGAEEAGAVFVKVALMDGNAMLYAPAPQTVYDD 89
           MRLK+SIWVAAYLRRCQTEGVFGAVR++GAEEAGAVFVK+AL++GNAML+ PAPQT YDD
Sbjct: 1   MRLKSSIWVAAYLRRCQTEGVFGAVRRRGAEEAGAVFVKLALLNGNAMLFTPAPQTAYDD 60

Query: 90  SRPVERLFVPTAPQPVSEPSVEERLTKELRFDPDAWIVETEDRAGRHFLDLAKG 143
           SRP+ER+F    P PV+E +VE+RLT+E++FDPD WIVE ED+AGRHFLDLAKG
Sbjct: 61  SRPIERVFAAATPAPVAEQAVEDRLTREIKFDPDVWIVEIEDKAGRHFLDLAKG 114