BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0072.0142.p         (176 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001239079.1| hypothetical protein BBta_3054 [Bradyrhizobi...   305   1e-81
ref|YP_576683.1| hypothetical protein Nham_1401 [Nitrobacter ham...   296   6e-79
ref|YP_569087.1| hypothetical protein RPD_1951 [Rhodopseudomonas...   293   6e-78
ref|YP_001204766.1| putative signal peptide [Bradyrhizobium sp. ...   291   3e-77
ref|YP_487114.1| hypothetical protein RPB_3508 [Rhodopseudomonas...   286   6e-76

>ref|YP_001239079.1| hypothetical protein BBta_3054 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35173.1| hypothetical protein BBta_3054 [Bradyrhizobium sp. BTAi1]
          Length = 194

 Score =  305 bits (782), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 147/166 (88%), Positives = 159/166 (95%)

Query: 1   MIRLLLTILAGVLLGGVVHLVSVLALPRIASQDAYSRLTPMTKLNEVTQLPLADPSHSPM 60
           MIRLL T++ GVLLGGVVHLVSVLALPRI++QDAYSRLTPMTKLN VTQLPLADP++SPM
Sbjct: 1   MIRLLFTVIVGVLLGGVVHLVSVLALPRISTQDAYSRLTPMTKLNAVTQLPLADPNNSPM 60

Query: 61  PLMDPAFAVAICRYDLSTGPLKLTVPVSQAYTSVSFYTRNEVAYYAINDRSAGKKVIELD 120
           P MDPAFA+AICRYDLS GPLKLTVPVSQAYTSVSFYTRNE+AYYAINDRSAGK+VIELD
Sbjct: 61  PFMDPAFAMAICRYDLSEGPLKLTVPVSQAYTSVSFYTRNEIAYYAINDRSAGKRVIELD 120

Query: 121 LMTEAQHNELPEDEEITAADRLIIDSPTSTGLILLKALAPEPGLMP 166
           LMTEAQH +LPEDEEITAADRLIIDSPT+TGLI+LKALA EPGLMP
Sbjct: 121 LMTEAQHEDLPEDEEITAADRLIIDSPTTTGLIVLKALAAEPGLMP 166


>ref|YP_576683.1| hypothetical protein Nham_1401 [Nitrobacter hamburgensis X14]
 gb|ABE62223.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 192

 Score =  296 bits (759), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 142/176 (80%), Positives = 162/176 (92%)

Query: 1   MIRLLLTILAGVLLGGVVHLVSVLALPRIASQDAYSRLTPMTKLNEVTQLPLADPSHSPM 60
           MIR+L  I+ G+LLGG+VHLVSVLALPRIASQDAYSRLT +T  N VTQLPLADP HSPM
Sbjct: 1   MIRVLFAIVGGILLGGIVHLVSVLALPRIASQDAYSRLTTITTPNAVTQLPLADPGHSPM 60

Query: 61  PLMDPAFAVAICRYDLSTGPLKLTVPVSQAYTSVSFYTRNEVAYYAINDRSAGKKVIELD 120
           P MDPAFAVA+CRYDLS G +KLTVPVSQAYTSVSFYTR++VAYYAINDRSAG+KVIEL+
Sbjct: 61  PFMDPAFAVAVCRYDLSGGSIKLTVPVSQAYTSVSFYTRSDVAYYAINDRSAGRKVIELN 120

Query: 121 LMTEAQHNELPEDEEITAADRLIIDSPTSTGLILLKALAPEPGLMPQAQASLAAKR 176
           LMTEAQH ELPE+E++TAADRLIIDSP++TGLI+LKALAPEPG+M QA+ASLAA +
Sbjct: 121 LMTEAQHAELPEEEDVTAADRLIIDSPSTTGLIVLKALAPEPGMMEQAKASLAAAK 176


>ref|YP_569087.1| hypothetical protein RPD_1951 [Rhodopseudomonas palustris BisB5]
 gb|ABE39186.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 187

 Score =  293 bits (750), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 136/174 (78%), Positives = 163/174 (93%)

Query: 1   MIRLLLTILAGVLLGGVVHLVSVLALPRIASQDAYSRLTPMTKLNEVTQLPLADPSHSPM 60
           MIRLL TI+AG++LGG+VHLVSVLALPRIASQDAY+RLTP+TK+NEV+QLP A P ++P+
Sbjct: 1   MIRLLTTIIAGIVLGGIVHLVSVLALPRIASQDAYARLTPLTKVNEVSQLPQASPDNAPL 60

Query: 61  PLMDPAFAVAICRYDLSTGPLKLTVPVSQAYTSVSFYTRNEVAYYAINDRSAGKKVIELD 120
           P +DPAFAVA+CRYDLS GPLKLTVP+SQAYT+VSFYTR+EVAYYAINDRSAG+K+IELD
Sbjct: 61  PFLDPAFAVAVCRYDLSNGPLKLTVPISQAYTAVSFYTRSEVAYYAINDRSAGRKIIELD 120

Query: 121 LMTEAQHNELPEDEEITAADRLIIDSPTSTGLILLKALAPEPGLMPQAQASLAA 174
           LMT  QH  LPEDE++TAADRLIIDSP++TGLI++KALA EPGLMPQA+A+L+A
Sbjct: 121 LMTTEQHGNLPEDEDVTAADRLIIDSPSTTGLIVMKALASEPGLMPQARAALSA 174


>ref|YP_001204766.1| putative signal peptide [Bradyrhizobium sp. ORS 278]
 emb|CAL76529.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS 278]
          Length = 194

 Score =  291 bits (745), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 155/174 (89%), Positives = 167/174 (95%)

Query: 1   MIRLLLTILAGVLLGGVVHLVSVLALPRIASQDAYSRLTPMTKLNEVTQLPLADPSHSPM 60
           MIRLL TI+ GVLLGGVVHLVSVLALPRI++QDAYSRLTPMTKLN VTQLPLADP++SPM
Sbjct: 1   MIRLLFTIVVGVLLGGVVHLVSVLALPRISTQDAYSRLTPMTKLNAVTQLPLADPNNSPM 60

Query: 61  PLMDPAFAVAICRYDLSTGPLKLTVPVSQAYTSVSFYTRNEVAYYAINDRSAGKKVIELD 120
           P MDPAFA+AICRYDLS GPLKLTVPVSQAYTSVSFYTRNE+AYYAINDRSAGK+VIELD
Sbjct: 61  PFMDPAFAMAICRYDLSDGPLKLTVPVSQAYTSVSFYTRNELAYYAINDRSAGKRVIELD 120

Query: 121 LMTEAQHNELPEDEEITAADRLIIDSPTSTGLILLKALAPEPGLMPQAQASLAA 174
           LMTEAQH +LPEDEE+TAADRLIIDSPT+TGLI+LKALA EPGLMPQAQASLAA
Sbjct: 121 LMTEAQHEDLPEDEEVTAADRLIIDSPTTTGLIVLKALAAEPGLMPQAQASLAA 174


>ref|YP_487114.1| hypothetical protein RPB_3508 [Rhodopseudomonas palustris HaA2]
 gb|ABD08203.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 187

 Score =  286 bits (733), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 131/174 (75%), Positives = 159/174 (91%)

Query: 1   MIRLLLTILAGVLLGGVVHLVSVLALPRIASQDAYSRLTPMTKLNEVTQLPLADPSHSPM 60
           MIR + T++AG++LGG+VHLVSVLALPRIASQDAY+RL P+T++NEV+QLP   P ++P+
Sbjct: 1   MIRFITTVIAGIVLGGIVHLVSVLALPRIASQDAYARLAPLTRVNEVSQLPPTTPDNAPL 60

Query: 61  PLMDPAFAVAICRYDLSTGPLKLTVPVSQAYTSVSFYTRNEVAYYAINDRSAGKKVIELD 120
           P +DPAFAVA+CRYDLS GP+KLTVPVSQAYT+VSFYTRNEVAYYAINDRSAG+KVIELD
Sbjct: 61  PFLDPAFAVAVCRYDLSNGPIKLTVPVSQAYTAVSFYTRNEVAYYAINDRSAGRKVIELD 120

Query: 121 LMTEAQHNELPEDEEITAADRLIIDSPTSTGLILLKALAPEPGLMPQAQASLAA 174
           LMT  QH  LPEDE++TAADRLIIDSPT+TGLI++KALA EPG+MPQA+A+L +
Sbjct: 121 LMTAEQHGNLPEDEDVTAADRLIIDSPTTTGLIVMKALASEPGMMPQARAALGS 174