BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0141.p (185 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239080.1| hypothetical protein BBta_3055 [Bradyrhizobi... 320 7e-86 ref|YP_576684.1| hypothetical protein Nham_1402 [Nitrobacter ham... 313 9e-84 ref|YP_001204767.1| putative signal peptide [Bradyrhizobium sp. ... 312 1e-83 ref|YP_780807.1| hypothetical protein RPE_1879 [Rhodopseudomonas... 309 1e-82 ref|NP_769741.1| hypothetical protein bll3101 [Bradyrhizobium ja... 305 3e-81 >ref|YP_001239080.1| hypothetical protein BBta_3055 [Bradyrhizobium sp. BTAi1] gb|ABQ35174.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 193 Score = 320 bits (820), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 151/185 (81%), Positives = 171/185 (92%) Query: 1 LLALVIATAVGLGLTYATATRGTDLGTLKIGAWTARPKSGTSDVDPYSRATIARSGELPI 60 L+AL+IAT VG+G T+ T TRGT+ GTL IGAWTARPK+GT+DVDPY+RATI R+GELPI Sbjct: 8 LIALLIATGVGIGATWMTTTRGTEFGTLTIGAWTARPKTGTADVDPYARATITRNGELPI 67 Query: 61 GTGDGIAFSATTDDKNKPLDGRCDIVVSGVTPAARFWTLTLFDRKGHLVANTLQRYGFTS 120 GTGDG+AF+ATTDDK KPLDGRCDI+VSGVTP ARFWTLTL+DRKGHLV NTLQRYGFTS Sbjct: 68 GTGDGVAFTATTDDKKKPLDGRCDILVSGVTPPARFWTLTLYDRKGHLVPNTLQRYGFTS 127 Query: 121 QEIMRASDGTFEIHIASRSRAGNWLPTGGIERYALMLRLYDTPVGVATRTQRDAPMPSIA 180 QE++R +DG+FEI +ASRSR+GNWLPTGGIERYALMLRLYDTPVGVATRTQRDAPMP+I Sbjct: 128 QELVRGADGSFEIRVASRSRSGNWLPTGGIERYALMLRLYDTPVGVATRTQRDAPMPAIT 187 Query: 181 TTGCP 185 T GCP Sbjct: 188 TVGCP 192 >ref|YP_576684.1| hypothetical protein Nham_1402 [Nitrobacter hamburgensis X14] gb|ABE62224.1| protein of unknown function DUF1214 [Nitrobacter hamburgensis X14] Length = 192 Score = 313 bits (801), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 149/184 (80%), Positives = 167/184 (90%) Query: 1 LLALVIATAVGLGLTYATATRGTDLGTLKIGAWTARPKSGTSDVDPYSRATIARSGELPI 60 LL +ATAVGLG T+ TATRGTD GTL IGAWTARP++G++D+DPYSRATIARSGELPI Sbjct: 8 LLGFGLATAVGLGATWFTATRGTDFGTLTIGAWTARPRTGSADIDPYSRATIARSGELPI 67 Query: 61 GTGDGIAFSATTDDKNKPLDGRCDIVVSGVTPAARFWTLTLFDRKGHLVANTLQRYGFTS 120 G GDGIAF AT DD +PLDGRCD++VSGVTPAARFWTLTL+DRKG LVAN+LQRYGFTS Sbjct: 68 GAGDGIAFLATADDGKRPLDGRCDVIVSGVTPAARFWTLTLYDRKGQLVANSLQRYGFTS 127 Query: 121 QEIMRASDGTFEIHIASRSRAGNWLPTGGIERYALMLRLYDTPVGVATRTQRDAPMPSIA 180 +EI+R SDG+F +H+ASR+RAGNWLPTGGIERY LMLRLYDTPVGVATRTQRDAPMPSIA Sbjct: 128 EEIVRNSDGSFAVHVASRARAGNWLPTGGIERYVLMLRLYDTPVGVATRTQRDAPMPSIA 187 Query: 181 TTGC 184 T GC Sbjct: 188 TGGC 191 >ref|YP_001204767.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL76530.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 193 Score = 312 bits (800), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 147/180 (81%), Positives = 167/180 (92%) Query: 6 IATAVGLGLTYATATRGTDLGTLKIGAWTARPKSGTSDVDPYSRATIARSGELPIGTGDG 65 IAT VG+G T+ T TRGT+ GTL IGAWTARPK+GT+DVDPY+RATI R+GELPIGTGDG Sbjct: 13 IATGVGIGATWITTTRGTEFGTLTIGAWTARPKTGTADVDPYARATITRNGELPIGTGDG 72 Query: 66 IAFSATTDDKNKPLDGRCDIVVSGVTPAARFWTLTLFDRKGHLVANTLQRYGFTSQEIMR 125 +AF+ATTDD+ KPLDGRCDI+VSGVTP ARFWTLTL+DRKGHLVANTL+RYGFTSQE++R Sbjct: 73 VAFTATTDDQKKPLDGRCDILVSGVTPPARFWTLTLYDRKGHLVANTLERYGFTSQELVR 132 Query: 126 ASDGTFEIHIASRSRAGNWLPTGGIERYALMLRLYDTPVGVATRTQRDAPMPSIATTGCP 185 +DG+FEI +A+RSRAGNWLPTGGIERYALMLRLYDTPVGVATRTQRDAPMP+I T GCP Sbjct: 133 GADGSFEIRVAARSRAGNWLPTGGIERYALMLRLYDTPVGVATRTQRDAPMPAITTVGCP 192 >ref|YP_780807.1| hypothetical protein RPE_1879 [Rhodopseudomonas palustris BisA53] gb|ABJ05827.1| protein of unknown function DUF1214 [Rhodopseudomonas palustris BisA53] Length = 192 Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 145/185 (78%), Positives = 168/185 (90%) Query: 1 LLALVIATAVGLGLTYATATRGTDLGTLKIGAWTARPKSGTSDVDPYSRATIARSGELPI 60 L+AL+IA VG+G T+ TATRG DL TL IGAWTARP++GT+D+DPY+RATIARSGELPI Sbjct: 8 LIALIIAATVGIGTTWITATRGVDLNTLTIGAWTARPRTGTADIDPYARATIARSGELPI 67 Query: 61 GTGDGIAFSATTDDKNKPLDGRCDIVVSGVTPAARFWTLTLFDRKGHLVANTLQRYGFTS 120 GTGDGIAF+ TDD +PLDGRCD+VVSGVTPAARFWTLTL+D +G+LVAN LQRYG+TS Sbjct: 68 GTGDGIAFATATDDAKRPLDGRCDVVVSGVTPAARFWTLTLYDTRGYLVANALQRYGYTS 127 Query: 121 QEIMRASDGTFEIHIASRSRAGNWLPTGGIERYALMLRLYDTPVGVATRTQRDAPMPSIA 180 QEI+RA++G+FE+ IASRSRAGNWLPTGGIERY LMLRLYDTPVGVATRTQRDAP+P+I Sbjct: 128 QEIVRAANGSFELRIASRSRAGNWLPTGGIERYTLMLRLYDTPVGVATRTQRDAPLPAIT 187 Query: 181 TTGCP 185 T GCP Sbjct: 188 TVGCP 192 >ref|NP_769741.1| hypothetical protein bll3101 [Bradyrhizobium japonicum USDA 110] dbj|BAC48366.1| bll3101 [Bradyrhizobium japonicum USDA 110] Length = 192 Score = 305 bits (780), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 143/175 (81%), Positives = 161/175 (92%) Query: 10 VGLGLTYATATRGTDLGTLKIGAWTARPKSGTSDVDPYSRATIARSGELPIGTGDGIAFS 69 VG+G T+ T TRGT++G L IG WTARP++GT+DVDPYSRATI R+GELPIGTGDG+AF+ Sbjct: 17 VGVGATWMTTTRGTEIGALTIGPWTARPRTGTADVDPYSRATIVRNGELPIGTGDGVAFT 76 Query: 70 ATTDDKNKPLDGRCDIVVSGVTPAARFWTLTLFDRKGHLVANTLQRYGFTSQEIMRASDG 129 AT DDK K LDGRCD++VSGVTP ARFWTLTL+DRKGHLVAN+LQRYGFTSQEI+R SDG Sbjct: 77 ATADDKKKALDGRCDVIVSGVTPPARFWTLTLYDRKGHLVANSLQRYGFTSQEIVRQSDG 136 Query: 130 TFEIHIASRSRAGNWLPTGGIERYALMLRLYDTPVGVATRTQRDAPMPSIATTGC 184 TFEI IASRSR+GNWLPTGGIERYALMLRLYDTPVGVATRTQRDAPMP+I+T GC Sbjct: 137 TFEIRIASRSRSGNWLPTGGIERYALMLRLYDTPVGVATRTQRDAPMPTISTVGC 191