BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0072.0134.p         (160 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001240490.1| NADH dehydrogenase subunit I [Bradyrhizobium...   323   4e-87
ref|NP_771549.1| NADH dehydrogenase subunit I [Bradyrhizobium ja...   323   6e-87
ref|YP_001206153.1| NADH dehydrogenase subunit I [Bradyrhizobium...   320   4e-86
ref|YP_486196.1| NADH dehydrogenase subunit I [Rhodopseudomonas ...   318   1e-85
ref|YP_570006.1| NADH dehydrogenase subunit I [Rhodopseudomonas ...   318   2e-85

>ref|YP_001240490.1| NADH dehydrogenase subunit I [Bradyrhizobium sp. BTAi1]
 sp|A5EK90.1|NUOI_BRASB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName:
           Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1
           subunit I
 gb|ABQ36584.1| NADH dehydrogenase subunit I [Bradyrhizobium sp. BTAi1]
          Length = 162

 Score =  323 bits (829), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 155/159 (97%), Positives = 159/159 (100%)

Query: 2   NATARSLLLSEFVSAFFLAMRYFFQPKPTLNYPFEKGPISPRFRGEHALRRYPNGEERCI 61
           +ATARSLLLSEFVSAFFLAMRYFFQPKPTLNYPFEKGPISPRFRGEHALRRYPNGEERCI
Sbjct: 4   SATARSLLLSEFVSAFFLAMRYFFQPKPTLNYPFEKGPISPRFRGEHALRRYPNGEERCI 63

Query: 62  ACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF 121
           ACKLCEA+CPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF
Sbjct: 64  ACKLCEAVCPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF 123

Query: 122 EFATETREELYYDKAKLLANGDRWEREIAKSIALDAPYR 160
           EFATETREELYYDKAKLLANGDRWEREI+K+IALDAPYR
Sbjct: 124 EFATETREELYYDKAKLLANGDRWEREISKAIALDAPYR 162


>ref|NP_771549.1| NADH dehydrogenase subunit I [Bradyrhizobium japonicum USDA 110]
 sp|Q89KJ6.1|NUOI_BRAJA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName:
           Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1
           subunit I
 dbj|BAC50174.1| NADH ubiquinone oxidoreductase chain I [Bradyrhizobium japonicum
           USDA 110]
          Length = 168

 Score =  323 bits (827), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 155/159 (97%), Positives = 158/159 (99%)

Query: 2   NATARSLLLSEFVSAFFLAMRYFFQPKPTLNYPFEKGPISPRFRGEHALRRYPNGEERCI 61
           NATARSLLLSEFVSAFFLAMRYFFQPKPTLNYPFEKGPISPRFRGEHALRRYPNGEERCI
Sbjct: 10  NATARSLLLSEFVSAFFLAMRYFFQPKPTLNYPFEKGPISPRFRGEHALRRYPNGEERCI 69

Query: 62  ACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF 121
           ACKLCEA+CPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF
Sbjct: 70  ACKLCEAVCPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF 129

Query: 122 EFATETREELYYDKAKLLANGDRWEREIAKSIALDAPYR 160
           EFATETREEL+YDKAKLLANGDRWEREIAK+I LDAPYR
Sbjct: 130 EFATETREELFYDKAKLLANGDRWEREIAKAIELDAPYR 168


>ref|YP_001206153.1| NADH dehydrogenase subunit I [Bradyrhizobium sp. ORS 278]
 sp|A4YVK2.1|NUOI_BRASO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName:
           Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1
           subunit I
 emb|CAL77928.1| NADH-quinone oxidoreductase chain I (NADH dehydrogenase I, chain I)
           (NDH-1, chain I) [Bradyrhizobium sp. ORS 278]
          Length = 162

 Score =  320 bits (820), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 153/159 (96%), Positives = 158/159 (99%)

Query: 2   NATARSLLLSEFVSAFFLAMRYFFQPKPTLNYPFEKGPISPRFRGEHALRRYPNGEERCI 61
           +ATARSLLL EFVSAFFLAMRYFF+PKPTLNYPFEKGPISPRFRGEHALRRYPNGEERCI
Sbjct: 4   SATARSLLLQEFVSAFFLAMRYFFKPKPTLNYPFEKGPISPRFRGEHALRRYPNGEERCI 63

Query: 62  ACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF 121
           ACKLCEA+CPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF
Sbjct: 64  ACKLCEAVCPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF 123

Query: 122 EFATETREELYYDKAKLLANGDRWEREIAKSIALDAPYR 160
           EFATETREELYYDKAKLLANGDRWEREI+K+IALDAPYR
Sbjct: 124 EFATETREELYYDKAKLLANGDRWEREISKAIALDAPYR 162


>ref|YP_486196.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris HaA2]
 sp|Q2IWX5.1|NUOI2_RHOP2 RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName:
           Full=NADH dehydrogenase I subunit I 2; AltName:
           Full=NDH-1 subunit I 2
 gb|ABD07285.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris
           HaA2]
          Length = 162

 Score =  318 bits (816), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 153/159 (96%), Positives = 157/159 (98%)

Query: 2   NATARSLLLSEFVSAFFLAMRYFFQPKPTLNYPFEKGPISPRFRGEHALRRYPNGEERCI 61
           NATARSLLL+EFVSAFFLAMRYFF+PKPT+NYPFEK PISPRFRGEHALRRYPNGEERCI
Sbjct: 4   NATARSLLLTEFVSAFFLAMRYFFKPKPTINYPFEKNPISPRFRGEHALRRYPNGEERCI 63

Query: 62  ACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF 121
           ACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF
Sbjct: 64  ACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF 123

Query: 122 EFATETREELYYDKAKLLANGDRWEREIAKSIALDAPYR 160
           EFATETREELYYDKA+LLANGDRWEREIAKSI LDAPYR
Sbjct: 124 EFATETREELYYDKARLLANGDRWEREIAKSIELDAPYR 162


>ref|YP_570006.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris BisB5]
 sp|Q135Y4.1|NUOI2_RHOPS RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName:
           Full=NADH dehydrogenase I subunit I 2; AltName:
           Full=NDH-1 subunit I 2
 gb|ABE40105.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris
           BisB5]
          Length = 162

 Score =  318 bits (814), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 153/159 (96%), Positives = 157/159 (98%)

Query: 2   NATARSLLLSEFVSAFFLAMRYFFQPKPTLNYPFEKGPISPRFRGEHALRRYPNGEERCI 61
           NATARSLLL+EFVSAFFLAMRYFF+PKPT+NYPFEK PISPRFRGEHALRRYPNGEERCI
Sbjct: 4   NATARSLLLTEFVSAFFLAMRYFFRPKPTINYPFEKNPISPRFRGEHALRRYPNGEERCI 63

Query: 62  ACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF 121
           ACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF
Sbjct: 64  ACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNF 123

Query: 122 EFATETREELYYDKAKLLANGDRWEREIAKSIALDAPYR 160
           EFATETREELYYDKA+LLANGDRWEREIAKSI LDAPYR
Sbjct: 124 EFATETREELYYDKARLLANGDRWEREIAKSIELDAPYR 162