BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0130.p (336 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771546.1| NADH dehydrogenase subunit L [Bradyrhizobium ja... 421 e-116 ref|YP_001240487.1| NADH dehydrogenase subunit L [Bradyrhizobium... 420 e-115 ref|YP_001206150.1| NADH dehydrogenase subunit L [Bradyrhizobium... 414 e-113 ref|ZP_08629636.1| NADH-ubiquinone oxidoreductase chain L [Brady... 405 e-111 ref|ZP_01047980.1| NADH dehydrogenase subunit L [Nitrobacter sp.... 397 e-108 >ref|NP_771546.1| NADH dehydrogenase subunit L [Bradyrhizobium japonicum USDA 110] dbj|BAC50171.1| NADH ubiquinone oxidoreductase chain L [Bradyrhizobium japonicum USDA 110] Length = 690 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 200/254 (78%), Positives = 220/254 (86%), Gaps = 2/254 (0%) Query: 84 ALAGTRIECGA-GESAIIEAAYAAHNPFAAYAYLLTIAAAGLTSFYSWRLIFKTFFGEPH 142 AL G + G + AIIE+AYA+HNPFA Y +L+T+ AAGLTSFYSWRLIFKTF GEPH Sbjct: 438 ALTGFPLTAGYFSKDAIIESAYASHNPFAIYGFLMTVVAAGLTSFYSWRLIFKTFHGEPH 497 Query: 143 DQKHYEAAHESPVWMLVPIGVLAAGSILAGLPFKELFVNPHGVEEFFRESVKMNPHILEN 202 D+ HYEAAHE+P+W+L+PIGVLA GSI+AG PFKELF HGVEEFFRESVKMNPHI+E Sbjct: 498 DEHHYEAAHEAPLWILIPIGVLAVGSIVAGFPFKELFAG-HGVEEFFRESVKMNPHIIEE 556 Query: 203 MEHMPGWLAPLPTVMMALGLFISYLFYIRRPYLPVELARQQPMLYQFLLNKWYFDELYDW 262 M H+P +A LPTVMM LG +SYLFYIRRPYLPVELA QPMLYQFLLNKWYFDELY+ Sbjct: 557 MHHIPETIALLPTVMMVLGFLVSYLFYIRRPYLPVELANTQPMLYQFLLNKWYFDELYEV 616 Query: 263 IFVRPAKWLGYTLWKKGDGFIIDGFGPDGVSARVLDVTRNVVKLQTGYLYHYAFAMLIGA 322 IFVRPAKW+GY LWKKGDGFIIDG GPDGVSARVLDVTRNVVK+QTGYLYHYAFAMLIG Sbjct: 617 IFVRPAKWIGYQLWKKGDGFIIDGLGPDGVSARVLDVTRNVVKIQTGYLYHYAFAMLIGV 676 Query: 323 AGLITWFMFGLGGQ 336 AGLITWFMFG GGQ Sbjct: 677 AGLITWFMFGFGGQ 690 >ref|YP_001240487.1| NADH dehydrogenase subunit L [Bradyrhizobium sp. BTAi1] gb|ABQ36581.1| NADH dehydrogenase subunit L [Bradyrhizobium sp. BTAi1] Length = 695 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 196/241 (81%), Positives = 214/241 (88%), Gaps = 1/241 (0%) Query: 96 ESAIIEAAYAAHNPFAAYAYLLTIAAAGLTSFYSWRLIFKTFFGEPHDQKHYEAAHESPV 155 + AIIEAAYA+HNPFA YAY LTI AAGLTSFYSWRL+FKTFFG PHDQ HYEAAHESP+ Sbjct: 455 KDAIIEAAYASHNPFATYAYFLTIVAAGLTSFYSWRLVFKTFFGTPHDQHHYEAAHESPI 514 Query: 156 WMLVPIGVLAAGSILAGLPFKELFVNPHGVEEFFRESVKMNPHILENMEHMPGWLAPLPT 215 WML+PIGVLAAGSILAG PFK LF +PHGVE FF ES+KMNPHILE+MEHMP WL LP Sbjct: 515 WMLIPIGVLAAGSILAGFPFKGLFADPHGVEHFFGESLKMNPHILEDMEHMPFWLGQLPF 574 Query: 216 VMMALGLFISYLFYIRRPYLPVELARQQPMLYQFLLNKWYFDELYDWIFVRPAKWLGYTL 275 +MM LG +SY FY+ RP +P ELA QQP+LY+FLLNKWYFDELYD+IFVRPAKWLG L Sbjct: 575 IMMVLGFAVSYFFYVSRPDIPEELAAQQPLLYKFLLNKWYFDELYDFIFVRPAKWLGRFL 634 Query: 276 WKKGDGFIIDGFGPDGVSARVLDVTRNVVKLQTGYLYHYAFAMLIGAAGLITWFMFGLGG 335 WKKGDGF+IDGFGPDGVSARVLDVTRNVVK+QTGYLYHYAFAMLIG AGLITWFMF +GG Sbjct: 635 WKKGDGFVIDGFGPDGVSARVLDVTRNVVKIQTGYLYHYAFAMLIGVAGLITWFMF-MGG 693 Query: 336 Q 336 Q Sbjct: 694 Q 694 >ref|YP_001206150.1| NADH dehydrogenase subunit L [Bradyrhizobium sp. ORS 278] emb|CAL77925.1| NADH-quinone oxidoreductase chain L (NADH dehydrogenase I, chain L) (NDH-1, chain L) [Bradyrhizobium sp. ORS 278] Length = 697 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 192/241 (79%), Positives = 213/241 (88%), Gaps = 1/241 (0%) Query: 96 ESAIIEAAYAAHNPFAAYAYLLTIAAAGLTSFYSWRLIFKTFFGEPHDQKHYEAAHESPV 155 + AIIE AYAAHNPFA YAY LTI AAGLTSFYSWRL+FKTFFG PHDQ HY+AAHESP+ Sbjct: 457 KDAIIETAYAAHNPFATYAYFLTIVAAGLTSFYSWRLVFKTFFGTPHDQHHYDAAHESPI 516 Query: 156 WMLVPIGVLAAGSILAGLPFKELFVNPHGVEEFFRESVKMNPHILENMEHMPGWLAPLPT 215 WML+P+GVL AGS+LAG+ FK FV+PHGVEEFF ES+KMNPHILE+MEHMP WL LP Sbjct: 517 WMLIPLGVLGAGSVLAGVLFKGFFVHPHGVEEFFGESLKMNPHILEDMEHMPFWLGQLPL 576 Query: 216 VMMALGLFISYLFYIRRPYLPVELARQQPMLYQFLLNKWYFDELYDWIFVRPAKWLGYTL 275 MM +G F+S LFY++RP +P ELA QQP+LY FLLNKWYFDELYD+IFVRPAKWLG L Sbjct: 577 AMMVIGFFVSLLFYVKRPDIPEELAAQQPLLYNFLLNKWYFDELYDFIFVRPAKWLGRFL 636 Query: 276 WKKGDGFIIDGFGPDGVSARVLDVTRNVVKLQTGYLYHYAFAMLIGAAGLITWFMFGLGG 335 WKKGDGF+IDGFGPDGVSARVLDVTRNVVK+QTGYLYHYAFAMLIG AGLITWFMF +GG Sbjct: 637 WKKGDGFVIDGFGPDGVSARVLDVTRNVVKIQTGYLYHYAFAMLIGVAGLITWFMF-MGG 695 Query: 336 Q 336 Q Sbjct: 696 Q 696 >ref|ZP_08629636.1| NADH-ubiquinone oxidoreductase chain L [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08129.1| NADH-ubiquinone oxidoreductase chain L [Bradyrhizobiaceae bacterium SG-6C] Length = 693 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 195/254 (76%), Positives = 216/254 (85%), Gaps = 2/254 (0%) Query: 84 ALAGTRIECGA-GESAIIEAAYAAHNPFAAYAYLLTIAAAGLTSFYSWRLIFKTFFGEPH 142 AL G + G + AIIE+A+ AHNPFA Y +L T+ AAGLTSFYSWRLIFKTF GEPH Sbjct: 441 ALTGFPLTAGYFSKDAIIESAFVAHNPFALYGFLCTVVAAGLTSFYSWRLIFKTFHGEPH 500 Query: 143 DQKHYEAAHESPVWMLVPIGVLAAGSILAGLPFKELFVNPHGVEEFFRESVKMNPHILEN 202 D+ HY+AAHESP ML+P+GVLA GSILAG PFKELF HGVEEFFRES+K +PHILE Sbjct: 501 DKHHYDAAHESPYTMLIPLGVLAMGSILAGFPFKELFAG-HGVEEFFRESLKNHPHILEE 559 Query: 203 MEHMPGWLAPLPTVMMALGLFISYLFYIRRPYLPVELARQQPMLYQFLLNKWYFDELYDW 262 M H+P +A LPTVMM +G +S+LFYIR+PYLPVELA QQP+LY F LNKWYFDELYD Sbjct: 560 MHHIPAMIAFLPTVMMVIGFLVSWLFYIRKPYLPVELANQQPLLYHFFLNKWYFDELYDV 619 Query: 263 IFVRPAKWLGYTLWKKGDGFIIDGFGPDGVSARVLDVTRNVVKLQTGYLYHYAFAMLIGA 322 IFVRPAKWLG LWKKGDGFIIDGFGPDGVSARVLDVTRNVV+LQTGYLYHYAFAMLIGA Sbjct: 620 IFVRPAKWLGRFLWKKGDGFIIDGFGPDGVSARVLDVTRNVVRLQTGYLYHYAFAMLIGA 679 Query: 323 AGLITWFMFGLGGQ 336 AGLITWF+FGLGGQ Sbjct: 680 AGLITWFIFGLGGQ 693 >ref|ZP_01047980.1| NADH dehydrogenase subunit L [Nitrobacter sp. Nb-311A] gb|EAQ34038.1| NADH dehydrogenase subunit L [Nitrobacter sp. Nb-311A] Length = 688 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 192/254 (75%), Positives = 216/254 (85%), Gaps = 3/254 (1%) Query: 84 ALAGTRIECGA-GESAIIEAAYAAHNPFAAYAYLLTIAAAGLTSFYSWRLIFKTFFGEPH 142 AL G + G + AIIE+AY +HNPFA Y + +T+AAAGLTSFYSWRLIFKTF G+PH Sbjct: 437 ALTGFPLTAGYFSKDAIIESAYVSHNPFAYYGFFMTVAAAGLTSFYSWRLIFKTFHGKPH 496 Query: 143 DQKHYEAAHESPVWMLVPIGVLAAGSILAGLPFKELFVNPHGVEEFFRESVKMNPHILEN 202 DQ HY+AAHESP WML+PIG+LAAGSILAG PFKELF HGVEEFFRESVKM+PHILE Sbjct: 497 DQAHYKAAHESPTWMLIPIGILAAGSILAGFPFKELFTG-HGVEEFFRESVKMHPHILEE 555 Query: 203 MEHMPGWLAPLPTVMMALGLFISYLFYIRRPYLPVELARQQPMLYQFLLNKWYFDELYDW 262 M H+P +A LPT MM LG +++LFYIRRP +PV+LAR+ PMLYQFLLNKWYFDELY+ Sbjct: 556 MHHIPKTIAFLPTAMMILGFAVAWLFYIRRPDVPVQLAREHPMLYQFLLNKWYFDELYEV 615 Query: 263 IFVRPAKWLGYTLWKKGDGFIIDGFGPDGVSARVLDVTRNVVKLQTGYLYHYAFAMLIGA 322 IFVRPAKWLG LWKKGDGF+IDGFGPDGVSA VLDVTRNVV+LQTGYLYHYAFAML+G Sbjct: 616 IFVRPAKWLGRFLWKKGDGFVIDGFGPDGVSAGVLDVTRNVVRLQTGYLYHYAFAMLMGV 675 Query: 323 AGLITWFMFGLGGQ 336 AGLITWFMF GGQ Sbjct: 676 AGLITWFMFS-GGQ 688