BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0127.p (281 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771543.1| biotin--protein ligase [Bradyrhizobium japonicu... 404 e-111 ref|YP_570000.1| biotin--acetyl-CoA-carboxylase ligase [Rhodopse... 371 e-101 ref|YP_577458.1| biotin--acetyl-CoA-carboxylase ligase [Nitrobac... 356 3e-96 ref|YP_004108889.1| biotin/acetyl-CoA-carboxylase ligase [Rhodop... 355 4e-96 ref|ZP_01047977.1| biotin--protein ligase [Nitrobacter sp. Nb-31... 347 1e-93 >ref|NP_771543.1| biotin--protein ligase [Bradyrhizobium japonicum USDA 110] dbj|BAC50168.1| birA bifunctional protein [Bradyrhizobium japonicum USDA 110] Length = 268 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 212/267 (79%), Positives = 234/267 (87%) Query: 14 MTFTLGPRAIAAGYRLAAFDQIGSTNAEAMLRARDGAQGPMWFVTPEQTAGRGRRQRVWV 73 M F LGPRA++AGY+LAAF++ GSTN EA+ AR G GPMWFVT EQTAGRGRRQR W+ Sbjct: 1 MGFALGPRALSAGYKLAAFERTGSTNTEAIEHARGGEPGPMWFVTSEQTAGRGRRQRAWI 60 Query: 74 APRGNLASTILEVTDVQPAVAATLGFAAGLSLEAALRKVSIEAALRLGPDSPKFTLKWPN 133 APRGNLA++ILEV V PAVAATLGFAAGL+ EAAL KVS+EAALRLG P++ LKWPN Sbjct: 61 APRGNLAASILEVMTVPPAVAATLGFAAGLAEEAALEKVSLEAALRLGEGRPRYALKWPN 120 Query: 134 DVLANGKKLSGILLEAEAIGSRLAVVVGIGTNVVAAPEGTPTPAVSLAALGIQIGAEELF 193 DVLA+GKKL GI LEAE IG RLAVVVGIGTNVVAAPEGTPTPAVSLAALG+QI AEELF Sbjct: 121 DVLADGKKLVGIGLEAEVIGDRLAVVVGIGTNVVAAPEGTPTPAVSLAALGVQISAEELF 180 Query: 194 AALSDAWVEFRGIWDDGRGFPEIRRLWLERAAGLGEKVAVQTGSATLEGTFDTIDDTGCL 253 +ALSDAWVEFRGIWD+GRGF EIRRLWLERAAGLGE+VA+ TG+ TLEG FDTIDD GCL Sbjct: 181 SALSDAWVEFRGIWDNGRGFAEIRRLWLERAAGLGERVAINTGTTTLEGIFDTIDDAGCL 240 Query: 254 IVRTADGERLPVTAGEVYFGTAASVRA 280 IVRTADG RLPV AGEV+FG+AASV A Sbjct: 241 IVRTADGRRLPVAAGEVFFGSAASVGA 267 >ref|YP_570000.1| biotin--acetyl-CoA-carboxylase ligase [Rhodopseudomonas palustris BisB5] gb|ABE40099.1| Biotin--acetyl-CoA-carboxylase ligase [Rhodopseudomonas palustris BisB5] Length = 269 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 190/265 (71%), Positives = 219/265 (82%), Gaps = 1/265 (0%) Query: 14 MTFTLGPRAIAAGYRLAAFDQIGSTNAEAMLRARDGAQGPMWFVTPEQTAGRGRRQRVWV 73 M LGPRA AAGYRLAAFD IGSTN+EA+ +AR G +GPMWFVT EQTAGRGRRQR W+ Sbjct: 1 MALQLGPRAQAAGYRLAAFDAIGSTNSEALAQARAGERGPMWFVTTEQTAGRGRRQRAWI 60 Query: 74 APRGNLASTILEVTDVQPAVAATLGFAAGLSLEAALRKVSIEAALRLGPDSPKFTLKWPN 133 APRGNLA+T+LEV V P VAATLGFAAGL+LE AL++VS EA R G F LKWPN Sbjct: 61 APRGNLAATVLEVLAVPPGVAATLGFAAGLALETALQQVSFEARARAGGADFGFRLKWPN 120 Query: 134 DVLANGKKLSGILLEAEAIGS-RLAVVVGIGTNVVAAPEGTPTPAVSLAALGIQIGAEEL 192 DVLA GKKL+GILLEAE++G+ RLAVVVGIGTNVVAAP+ TP PA SL LGI + AE+L Sbjct: 121 DVLAGGKKLTGILLEAESVGADRLAVVVGIGTNVVAAPDDTPYPAASLHGLGIHVSAEDL 180 Query: 193 FAALSDAWVEFRGIWDDGRGFPEIRRLWLERAAGLGEKVAVQTGSATLEGTFDTIDDTGC 252 FAALSDAW E R +W++GRGF EIRR WL RAAGLG V+VQ+GS T++G FDTID+TGC Sbjct: 181 FAALSDAWAETRAVWNEGRGFGEIRRQWLARAAGLGGPVSVQSGSTTIDGIFDTIDETGC 240 Query: 253 LIVRTADGERLPVTAGEVYFGTAAS 277 LIVRT+DG R+PV+AG+VYF TAAS Sbjct: 241 LIVRTSDGRRVPVSAGDVYFRTAAS 265 >ref|YP_577458.1| biotin--acetyl-CoA-carboxylase ligase [Nitrobacter hamburgensis X14] gb|ABE62998.1| Biotin--acetyl-CoA-carboxylase ligase [Nitrobacter hamburgensis X14] Length = 270 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 189/269 (70%), Positives = 225/269 (83%), Gaps = 2/269 (0%) Query: 14 MTFTLGPRAIAAGYRLAAFDQIGSTNAEAMLRARDGAQGPMWFVTPEQTAGRGRRQRVWV 73 MTF+LGPRA +AGYR+AAFD IGSTNAEA++RAR G GP+W T EQTAGRGRRQR WV Sbjct: 1 MTFSLGPRAASAGYRIAAFDSIGSTNAEALMRARAGETGPIWLATTEQTAGRGRRQRAWV 60 Query: 74 APRGNLASTILEVTDVQPAVAATLGFAAGLSLEAALRKVSIEAALRL-GPDSPKFTLKWP 132 +PRGNLAS+ILEV D PAVAATL FAAGL+LEAAL+ VS+EA +R G ++ F LKWP Sbjct: 61 SPRGNLASSILEVIDTSPAVAATLSFAAGLALEAALQTVSLEARMRSPGSENATFHLKWP 120 Query: 133 NDVLANGKKLSGILLEAEAIG-SRLAVVVGIGTNVVAAPEGTPTPAVSLAALGIQIGAEE 191 NDVLA GKKL+GILLEAE + RLAVVVGIGTNVVAAPEG P PAVSL LGI IGA + Sbjct: 121 NDVLAGGKKLAGILLEAETVAHDRLAVVVGIGTNVVAAPEGIPYPAVSLRDLGIDIGAAD 180 Query: 192 LFAALSDAWVEFRGIWDDGRGFPEIRRLWLERAAGLGEKVAVQTGSATLEGTFDTIDDTG 251 LF AL++AWVEFR IWD GRGF +IRRLWL+RAAG+G+ V+V++G++T+ G FDTID+ G Sbjct: 181 LFRALTEAWVEFRQIWDGGRGFGDIRRLWLDRAAGVGQAVSVRSGASTISGLFDTIDEDG 240 Query: 252 CLIVRTADGERLPVTAGEVYFGTAASVRA 280 CLIV T+DG+R+ V+AG+VYFG AAS+ A Sbjct: 241 CLIVATSDGKRMAVSAGDVYFGAAASIGA 269 >ref|YP_004108889.1| biotin/acetyl-CoA-carboxylase ligase [Rhodopseudomonas palustris DX-1] gb|ADU44156.1| biotin/acetyl-CoA-carboxylase ligase [Rhodopseudomonas palustris DX-1] Length = 268 Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 191/262 (72%), Positives = 214/262 (81%), Gaps = 1/262 (0%) Query: 16 FTLGPRAIAAGYRLAAFDQIGSTNAEAMLRARDGAQGPMWFVTPEQTAGRGRRQRVWVAP 75 LG +A AAGYRLAAFD +GSTNAEA+ RAR G GP WFVT EQTAGRGRRQR WVAP Sbjct: 4 MQLGSKATAAGYRLAAFDSVGSTNAEALARARAGEAGPAWFVTTEQTAGRGRRQRAWVAP 63 Query: 76 RGNLASTILEVTDVQPAVAATLGFAAGLSLEAALRKVSIEAALRLGPDSPKFTLKWPNDV 135 RGNLAS++LEV V P AATLGFAAGL+LEAAL++VS+EA R G D F LKWPNDV Sbjct: 64 RGNLASSVLEVMRVPPGTAATLGFAAGLALEAALQQVSLEARARSGTDF-GFRLKWPNDV 122 Query: 136 LANGKKLSGILLEAEAIGSRLAVVVGIGTNVVAAPEGTPTPAVSLAALGIQIGAEELFAA 195 LA+GKKL+GILLEAE +G RLAVVVGIGTNVVAAP TP PAVSL LGI + AE+LFAA Sbjct: 123 LASGKKLAGILLEAENVGDRLAVVVGIGTNVVAAPTDTPYPAVSLHDLGIAVSAEDLFAA 182 Query: 196 LSDAWVEFRGIWDDGRGFPEIRRLWLERAAGLGEKVAVQTGSATLEGTFDTIDDTGCLIV 255 LSDAW E RGIWD GRGF EIRR WLERAAGLGE V++ +G + LEG FD+IDDTGCLIV Sbjct: 183 LSDAWTELRGIWDGGRGFAEIRRRWLERAAGLGEPVSITSGDSVLEGVFDSIDDTGCLIV 242 Query: 256 RTADGERLPVTAGEVYFGTAAS 277 RT DG R+PV+AG+VYF + AS Sbjct: 243 RTTDGRRVPVSAGDVYFRSVAS 264 >ref|ZP_01047977.1| biotin--protein ligase [Nitrobacter sp. Nb-311A] gb|EAQ34035.1| biotin--protein ligase [Nitrobacter sp. Nb-311A] Length = 270 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 184/269 (68%), Positives = 221/269 (82%), Gaps = 2/269 (0%) Query: 14 MTFTLGPRAIAAGYRLAAFDQIGSTNAEAMLRARDGAQGPMWFVTPEQTAGRGRRQRVWV 73 M F+LGPRA +AGYRLA FD+IGSTNAEA++RAR G GP+W V EQTAGRGRRQR W+ Sbjct: 1 MAFSLGPRAASAGYRLAVFDRIGSTNAEALMRARAGETGPIWLVAAEQTAGRGRRQRSWI 60 Query: 74 APRGNLASTILEVTDVQPAVAATLGFAAGLSLEAALRKVSIEAALRL-GPDSPKFTLKWP 132 +P GNLA ++LEV D+ PAVAATL FAAGL+LEAALR VS+EA +R G ++ F LKWP Sbjct: 61 SPPGNLACSVLEVIDISPAVAATLSFAAGLALEAALRSVSLEARMRSPGSENVTFHLKWP 120 Query: 133 NDVLANGKKLSGILLEAEAI-GSRLAVVVGIGTNVVAAPEGTPTPAVSLAALGIQIGAEE 191 NDVLA+GKKL+GILLEAE + RLAVVVGIG NVVAAPEG P PAV+L LGI IGAE+ Sbjct: 121 NDVLADGKKLAGILLEAEIVEHDRLAVVVGIGANVVAAPEGMPYPAVALRDLGIDIGAED 180 Query: 192 LFAALSDAWVEFRGIWDDGRGFPEIRRLWLERAAGLGEKVAVQTGSATLEGTFDTIDDTG 251 LF AL+DAW EFR IWD+GRGF IRRLWL+RAAG+G+ V++++ S+T+ G FDTID G Sbjct: 181 LFRALTDAWTEFRTIWDEGRGFGGIRRLWLDRAAGVGQHVSIRSDSSTISGLFDTIDKNG 240 Query: 252 CLIVRTADGERLPVTAGEVYFGTAASVRA 280 CLIV T+DG+R+ V+AG+VYFG AASV A Sbjct: 241 CLIVATSDGKRVAVSAGDVYFGAAASVGA 269