BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0123.p (401 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771538.1| methylthioribose kinase [Bradyrhizobium japonic... 525 e-147 ref|YP_001240480.1| methylthioribose kinase [Bradyrhizobium sp. ... 511 e-143 ref|YP_001206143.1| methylthioribose kinase [Bradyrhizobium sp. ... 507 e-141 ref|YP_002299217.1| methylthioribose kinase [Rhodospirillum cent... 355 6e-96 ref|YP_004556038.1| 5-methylthioribose kinase [Sphingobium chlor... 346 4e-93 >ref|NP_771538.1| methylthioribose kinase [Bradyrhizobium japonicum USDA 110] dbj|BAC50163.1| bll4898 [Bradyrhizobium japonicum USDA 110] Length = 430 Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust. Identities = 251/320 (78%), Positives = 278/320 (86%) Query: 8 GSGPSAYRILREADLRDYLAELPAIVAQLGGAPADWSISEVGDGNLNLVFIVKGNSGGLA 67 G YRIL EA LRDYLA LP + A LGG PA W I+EVGDGNLNLVFIVKG+ GG+A Sbjct: 3 GDRAGDYRILHEAALRDYLAGLPDLKALLGGDPASWEITEVGDGNLNLVFIVKGDRGGVA 62 Query: 68 VKQALPYVRLVGESWPLPLSRAHYEHMALVHQARLAPMLVPAALHHDAPLALTAMELLEP 127 VKQALPYVRLVGESWPLPLSRAHYE++AL QA LAP LVPA LHH+ LALT MELLEP Sbjct: 63 VKQALPYVRLVGESWPLPLSRAHYEYLALSRQAELAPGLVPALLHHNEKLALTVMELLEP 122 Query: 128 HVIMRKGLIEATRYPRFVEDISTFLAQTLFLTSDLALSAAEKKQGIADFAGNHALCKITE 187 H+IMRKGL+ AT+YPRF DI+TF+A+TLF TSDLALSAAEKK+GIA FAGNHALCKITE Sbjct: 123 HIIMRKGLVAATQYPRFAGDITTFMARTLFFTSDLALSAAEKKEGIAAFAGNHALCKITE 182 Query: 188 DLIFTDPYRIAQQNRWTAPYLDATAAAFREDLDLHVAISRLKLKFMASPQALLHGDLHTG 247 DLIFTDPYRIA+QNRWTAPYLD AA+ R+D+DLHVAISRLKLKFMASP+ALLHGDLHTG Sbjct: 183 DLIFTDPYRIAEQNRWTAPYLDGLAASLRDDMDLHVAISRLKLKFMASPEALLHGDLHTG 242 Query: 248 SIMVTDSETRVIDPEFAFYGPMGFDIGAVIGNLLMAYLASAGHERTPGERASFEAWLLAT 307 SIMVT S+TRVIDPEFAFYGPMGFD+GAV+ NLLMAY ASAGHER PGERA+FE W+L T Sbjct: 243 SIMVTGSQTRVIDPEFAFYGPMGFDVGAVLANLLMAYFASAGHERAPGERAAFEGWVLET 302 Query: 308 IEGVWSEFSRKFLALWRSEA 327 +E VW+ F+ KFL LWRS A Sbjct: 303 VEQVWTAFAGKFLDLWRSHA 322 >ref|YP_001240480.1| methylthioribose kinase [Bradyrhizobium sp. BTAi1] gb|ABQ36574.1| 5'-methylthioribose kinase [Bradyrhizobium sp. BTAi1] Length = 433 Score = 511 bits (1316), Expect = e-143, Method: Compositional matrix adjust. Identities = 242/318 (76%), Positives = 279/318 (87%), Gaps = 2/318 (0%) Query: 11 PSAYRILREADLRDYLAELPAIVAQLGGAPAD-WSISEVGDGNLNLVFIVKGNSGGLAVK 69 PS YRIL E DLRDYLA + A+ AQLGG PAD WSI+EVGDGNLNLVFIVKG SGGLAVK Sbjct: 12 PSGYRILNETDLRDYLAGIAAVAAQLGG-PADRWSITEVGDGNLNLVFIVKGTSGGLAVK 70 Query: 70 QALPYVRLVGESWPLPLSRAHYEHMALVHQARLAPMLVPAALHHDAPLALTAMELLEPHV 129 QALPYVRLVGESWPLPLSRAH+EH+AL HQ RLAP LVPA +HHD LALTAMELLEPH+ Sbjct: 71 QALPYVRLVGESWPLPLSRAHFEHLALTHQGRLAPGLVPAIIHHDPALALTAMELLEPHI 130 Query: 130 IMRKGLIEATRYPRFVEDISTFLAQTLFLTSDLALSAAEKKQGIADFAGNHALCKITEDL 189 IMRKGL+ YP FV+ I+TF+A+TLF +SDLALSAA KK+ IA FAGNHALCKITEDL Sbjct: 131 IMRKGLVAGAIYPAFVDHITTFMARTLFFSSDLALSAAAKKEAIASFAGNHALCKITEDL 190 Query: 190 IFTDPYRIAQQNRWTAPYLDATAAAFREDLDLHVAISRLKLKFMASPQALLHGDLHTGSI 249 IFTDPYR A+QNRWT+P+LDATAA R DLDLHVA+SRLKL+F++ +AL+HGDLHTGSI Sbjct: 191 IFTDPYRSAEQNRWTSPWLDATAADIRADLDLHVAVSRLKLQFLSRAEALIHGDLHTGSI 250 Query: 250 MVTDSETRVIDPEFAFYGPMGFDIGAVIGNLLMAYLASAGHERTPGERASFEAWLLATIE 309 MVT++ET+VIDPEFAFYGPMGFD+GAV+ NLLMAY AS GHER+PGER +FE+W+L+T++ Sbjct: 251 MVTETETKVIDPEFAFYGPMGFDVGAVLANLLMAYFASVGHERSPGEREAFESWVLSTVD 310 Query: 310 GVWSEFSRKFLALWRSEA 327 VWS F+ KFL LWRSE+ Sbjct: 311 QVWSGFAGKFLELWRSES 328 >ref|YP_001206143.1| methylthioribose kinase [Bradyrhizobium sp. ORS 278] emb|CAL77918.1| putative S-methyl-5-thioribose kinase [Bradyrhizobium sp. ORS 278] Length = 433 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 246/328 (75%), Positives = 276/328 (84%), Gaps = 1/328 (0%) Query: 1 MNLQSQPGSG-PSAYRILREADLRDYLAELPAIVAQLGGAPADWSISEVGDGNLNLVFIV 59 M G G PS YRIL E DLR LA +PA+ AQLGG WSI+EVGDGNLNLVFIV Sbjct: 1 MTTSGAAGQGTPSGYRILNEPDLRGTLAAVPAVAAQLGGPAEHWSITEVGDGNLNLVFIV 60 Query: 60 KGNSGGLAVKQALPYVRLVGESWPLPLSRAHYEHMALVHQARLAPMLVPAALHHDAPLAL 119 KG +GGLAVKQALPYVRLVGESWPLPLSRAHYEH+AL HQ RLAP LVPA +HHD LAL Sbjct: 61 KGTAGGLAVKQALPYVRLVGESWPLPLSRAHYEHLALAHQNRLAPGLVPAIVHHDPALAL 120 Query: 120 TAMELLEPHVIMRKGLIEATRYPRFVEDISTFLAQTLFLTSDLALSAAEKKQGIADFAGN 179 TAMELLEPH+IMRKGL+ T YP FV+ I+TF+A+TLF +SDLALSAA KK+ IA FAGN Sbjct: 121 TAMELLEPHIIMRKGLVAGTIYPAFVDHITTFMARTLFFSSDLALSAAAKKEAIASFAGN 180 Query: 180 HALCKITEDLIFTDPYRIAQQNRWTAPYLDATAAAFREDLDLHVAISRLKLKFMASPQAL 239 HALCKITEDLIFTDPYRIA+QNRWTAP+LDATAA R DLDLHVAISRLKLKF++S +AL Sbjct: 181 HALCKITEDLIFTDPYRIAEQNRWTAPWLDATAADIRADLDLHVAISRLKLKFLSSAEAL 240 Query: 240 LHGDLHTGSIMVTDSETRVIDPEFAFYGPMGFDIGAVIGNLLMAYLASAGHERTPGERAS 299 +HGDLHTGSIMVT+ ET+VIDPEFAFYGPMGFD+GAV+ NLLMAY ASAGHER+ G+R + Sbjct: 241 IHGDLHTGSIMVTERETKVIDPEFAFYGPMGFDVGAVLANLLMAYFASAGHERSHGDREA 300 Query: 300 FEAWLLATIEGVWSEFSRKFLALWRSEA 327 FE+W+L T VWS F+ KFL LWRS A Sbjct: 301 FESWVLGTAGQVWSGFADKFLELWRSGA 328 >ref|YP_002299217.1| methylthioribose kinase [Rhodospirillum centenum SW] gb|ACJ00405.1| 5-methylthioribose kinase [Rhodospirillum centenum SW] Length = 430 Score = 355 bits (912), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 171/317 (53%), Positives = 219/317 (69%) Query: 11 PSAYRILREADLRDYLAELPAIVAQLGGAPADWSISEVGDGNLNLVFIVKGNSGGLAVKQ 70 P Y L E + +LA +P + +LGG PADWS+ EVGDGNLN V++V G G + VKQ Sbjct: 6 PPGYEPLGEEKVAAFLAAVPGVPERLGGGPADWSVREVGDGNLNYVYLVDGPHGSVCVKQ 65 Query: 71 ALPYVRLVGESWPLPLSRAHYEHMALVHQARLAPMLVPAALHHDAPLALTAMELLEPHVI 130 ALPY+RLVGE WPL L RAH+E +A A VP LH+D L ME L PH+I Sbjct: 66 ALPYLRLVGEGWPLGLQRAHFEQLATHVVAPHVGRAVPQILHYDPTLFAIVMEKLSPHII 125 Query: 131 MRKGLIEATRYPRFVEDISTFLAQTLFLTSDLALSAAEKKQGIADFAGNHALCKITEDLI 190 +R+G++ TRYPR I+ ++A +LF TSDLAL A KK+ +A+F GN LC +TE++I Sbjct: 126 LRRGMVAGTRYPRLAAQIADYMANSLFHTSDLALPARRKKELMAEFCGNWELCGLTEEVI 185 Query: 191 FTDPYRIAQQNRWTAPYLDATAAAFREDLDLHVAISRLKLKFMASPQALLHGDLHTGSIM 250 FT PY + NRWT+P LDATAA R D + +A +RLKLKF+ASP+ALLHGDLHTGS+M Sbjct: 186 FTQPYMVHPHNRWTSPQLDATAARVRADTEWKLAAARLKLKFLASPEALLHGDLHTGSVM 245 Query: 251 VTDSETRVIDPEFAFYGPMGFDIGAVIGNLLMAYLASAGHERTPGERASFEAWLLATIEG 310 VT +TRVIDPEFAF+GPMGFD+GA++GNL + + A GH RA ++ W+L T E Sbjct: 246 VTADDTRVIDPEFAFFGPMGFDVGAMLGNLWINFFAQDGHATAESPRAEYQDWVLETAEA 305 Query: 311 VWSEFSRKFLALWRSEA 327 VW+ F +FLALWR A Sbjct: 306 VWTGFRERFLALWRGGA 322 >ref|YP_004556038.1| 5-methylthioribose kinase [Sphingobium chlorophenolicum L-1] gb|AEG51532.1| 5-methylthioribose kinase [Sphingobium chlorophenolicum L-1] Length = 411 Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 175/315 (55%), Positives = 220/315 (69%), Gaps = 6/315 (1%) Query: 13 AYRILREADLRDYLAELPAIVAQLGGAPADWSISEVGDGNLNLVFIVKGNSGGLAVKQAL 72 +YR L E +LA++PA+ +LGG DWS+ EVGDGNLNLVF+V G GG+A KQAL Sbjct: 2 SYRPLTETTAAAFLADIPAVAERLGGEANDWSVQEVGDGNLNLVFLVTGPQGGVAAKQAL 61 Query: 73 PYVRLVGESWPLPLSRAHYEHMALVHQARLAPMLVPAALHHDAPLALTAMELLEPHVIMR 132 PYVRLVGESWPLPLSRA+YE +AL QARL+P VPA +HHD +ALT ME L PH +R Sbjct: 62 PYVRLVGESWPLPLSRAYYERLALADQARLSPERVPALIHHDDVMALTVMEYLTPHRTLR 121 Query: 133 KGLIEATRYPRFVEDISTFLAQTLFLTSDLALSAAEKKQGIADFAGNHALCKITEDLIFT 192 L+E RYP E ++ FLA TLF TSDLA+ A EKK IA + GN A+C+ITEDLIF Sbjct: 122 GALVEGLRYPLLAEHMAEFLADTLFFTSDLAVPAVEKKARIAAYLGNTAMCRITEDLIFD 181 Query: 193 DPYRIAQQNRWTAPYLDATAAAFREDLDLHVAISRLKLKFMASPQALLHGDLHTGSIMVT 252 +PY A N T P LD A R D+ L ++ LK +F+A+P+ALLHGDLHTGSIMVT Sbjct: 182 EPYFDAPMNHHT-PGLDHVVATLRADIPLLLSAQALKARFLAAPEALLHGDLHTGSIMVT 240 Query: 253 DSETRVIDPEFAFYGPMGFDIGAVIGNLLMAYLASAGHERTPGERASFEAWLLATIEGVW 312 ++R IDPEFAFYGP+GFD+G ++ NL MA+ A +G + PG + WLLA E +W Sbjct: 241 AQDSRAIDPEFAFYGPIGFDVGMLLANLWMAHFAQSG--QRPGVE---DGWLLAQAEALW 295 Query: 313 SEFSRKFLALWRSEA 327 + F+ +F WR+ A Sbjct: 296 AGFAERFAGHWRNHA 310