BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0072.0121.p         (104 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769744.1| major facilitator superfamily transporter [Brad...   134   6e-30
ref|YP_001239083.1| major facilitator superfamily permease [Brad...   134   6e-30
ref|YP_001204770.1| major facilitator superfamily permease [Brad...   122   2e-26
ref|YP_569094.1| major facilitator transporter [Rhodopseudomonas...   117   5e-25
ref|YP_531672.1| major facilitator transporter [Rhodopseudomonas...   116   1e-24

>ref|NP_769744.1| major facilitator superfamily transporter [Bradyrhizobium japonicum
           USDA 110]
 dbj|BAC48369.1| major facilitator superfamily transporter [Bradyrhizobium japonicum
           USDA 110]
          Length = 573

 Score =  134 bits (336), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/104 (71%), Positives = 83/104 (79%), Gaps = 1/104 (0%)

Query: 1   VARPQVGTVTGAMNFFRAMMASFTVAAFTTILLMTLGTDISLAGEHHAAASTVSAIPMAD 60
           VARPQVGT+TGAMNFFR++M+SFTVAAF  ILL+ LGTDI LAGEHHAA   + AIP  D
Sbjct: 471 VARPQVGTITGAMNFFRSLMSSFTVAAFAAILLIALGTDIPLAGEHHAAGG-IPAIPADD 529

Query: 61  MIHAFRYVFGGAAVLLTTASICMITMEERPLAGPAAHPPAEMAE 104
           M HAFRYVFG A  L+TTAS+C+I MEERPLAGP      EMAE
Sbjct: 530 MRHAFRYVFGAATALMTTASLCLIMMEERPLAGPTVTQQVEMAE 573


>ref|YP_001239083.1| major facilitator superfamily permease [Bradyrhizobium sp. BTAi1]
 gb|ABQ35177.1| putative Permease of the major facilitator superfamily
           [Bradyrhizobium sp. BTAi1]
          Length = 527

 Score =  134 bits (336), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 69/104 (66%), Positives = 80/104 (76%), Gaps = 3/104 (2%)

Query: 1   VARPQVGTVTGAMNFFRAMMASFTVAAFTTILLMTLGTDISLAGEHHAAASTVSAIPMAD 60
           VAR Q+GT+TGAMNFFR+MM+SFTVAAF+ ILLM LG DISLA   H A   VS I  AD
Sbjct: 427 VARSQIGTITGAMNFFRSMMSSFTVAAFSAILLMVLGADISLAEGAHGA---VSGIAEAD 483

Query: 61  MIHAFRYVFGGAAVLLTTASICMITMEERPLAGPAAHPPAEMAE 104
           MI+AFR+VF  A V+L  AS+CMI MEERPLAGP+   P +MAE
Sbjct: 484 MIYAFRFVFAAATVMLACASVCMILMEERPLAGPSRTEPVDMAE 527


>ref|YP_001204770.1| major facilitator superfamily permease [Bradyrhizobium sp. ORS 278]
 emb|CAL76533.1| putative Permease of the major facilitator superfamily
           [Bradyrhizobium sp. ORS 278]
          Length = 527

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/104 (63%), Positives = 78/104 (75%), Gaps = 3/104 (2%)

Query: 1   VARPQVGTVTGAMNFFRAMMASFTVAAFTTILLMTLGTDISLAGEHHAAASTVSAIPMAD 60
           V R Q+GT+TGAMNFFR+MM+SFTVAAF+ ILLM LG DISLA   H A   VS I  AD
Sbjct: 427 VDRSQIGTITGAMNFFRSMMSSFTVAAFSAILLMALGADISLAEGAHGA---VSGIAEAD 483

Query: 61  MIHAFRYVFGGAAVLLTTASICMITMEERPLAGPAAHPPAEMAE 104
           MIHAFR+V+  A  +L  AS+CMI MEERPLAGP+ +   E+AE
Sbjct: 484 MIHAFRFVYAAATAMLACASVCMILMEERPLAGPSRNETVELAE 527


>ref|YP_569094.1| major facilitator transporter [Rhodopseudomonas palustris BisB5]
 gb|ABE39193.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris
           BisB5]
          Length = 530

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/105 (58%), Positives = 77/105 (73%), Gaps = 3/105 (2%)

Query: 1   VARPQVGTVTGAMNFFRAMMASFTVAAFTTILLMTLGTDISLAGEHHAAASTVSAIPMAD 60
           V RPQ+GT TGAMNFFRA+M+SFTVAAFT +LL+T G +I L G  H  A  V ++  AD
Sbjct: 428 VPRPQIGTATGAMNFFRALMSSFTVAAFTAVLLITFGGEIQLGGAEHRHA--VGSVASAD 485

Query: 61  MIHAFRYVFGGAAVLLTTASICMITMEERPLAGP-AAHPPAEMAE 104
           M+ AFR+VFG AA++L  ++IC+  MEER LAGP    PP E+AE
Sbjct: 486 MVAAFRWVFGAAALMLAGSAICVAIMEERRLAGPDNTPPPLELAE 530


>ref|YP_531672.1| major facilitator transporter [Rhodopseudomonas palustris BisB18]
 gb|ABD87353.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris
           BisB18]
          Length = 525

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/104 (64%), Positives = 77/104 (74%), Gaps = 5/104 (4%)

Query: 1   VARPQVGTVTGAMNFFRAMMASFTVAAFTTILLMTLGTDISLAGEHHAAASTVSAIPMAD 60
           V RPQVGT TGAMNFFRA+MASFTVAAFTTILL +LG  IS   EH  A   V  IP AD
Sbjct: 427 VPRPQVGTATGAMNFFRALMASFTVAAFTTILLGSLGGGISFGAEHRHA---VGGIPAAD 483

Query: 61  MIHAFRYVFGGAAVLLTTASICMITMEERPLAGPAAHPPAEMAE 104
           M+ AFRYVF  +A L+ TA++CM+ MEE PLAGPA  P  ++AE
Sbjct: 484 MVAAFRYVFAASAALMATAALCMVVMEELPLAGPAVTP--DLAE 525