BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0089.p (394 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001208858.1| putative polysaccharide export protein [Brad... 639 0.0 ref|YP_578263.1| polysaccharide export protein [Nitrobacter hamb... 508 e-142 ref|YP_002360437.1| polysaccharide export protein [Methylocella ... 422 e-116 ref|YP_001832165.1| polysaccharide export protein [Beijerinckia ... 417 e-114 ref|YP_001204296.1| putative capsule polysaccharide export outer... 384 e-104 >ref|YP_001208858.1| putative polysaccharide export protein [Bradyrhizobium sp. ORS 278] emb|CAL80643.1| putative Polysaccharide export protein [Bradyrhizobium sp. ORS 278] Length = 335 Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/335 (92%), Positives = 326/335 (97%) Query: 60 LASFAPQLAGGIQGPPPKDIRFGIGDVVSVTIFEAAAGGLFIPVEAGVRPGNYITLPNQN 119 +ASFAP+L GGIQGP P++IRFG+GDVVSVTIFEAAAGGLFIP EAGVRPGNYITLPNQN Sbjct: 1 MASFAPRLGGGIQGPAPREIRFGVGDVVSVTIFEAAAGGLFIPAEAGVRPGNYITLPNQN 60 Query: 120 VDTDGNISVPYAGAIRAKSRTPTEVQRSIVDALKNRAIEPQAVVALIEQRTSLISVLGEV 179 VDTDGNISVPYAGA+RAK RTP EVQ+SIVDALKNRAIEPQAVVALIEQRTSLISVLGEV Sbjct: 61 VDTDGNISVPYAGAVRAKGRTPAEVQKSIVDALKNRAIEPQAVVALIEQRTSLISVLGEV 120 Query: 180 NSPNRFPANAAGEHVLDAITRAGGPKGQGFDTWVMLERDGKRTTVPFGQLVYEPKSNIYA 239 NSP RFPANAAGEH+LDAITRAGGPKGQGFDTWVMLER+GKRTTVPFGQLVYEP+SNI+ Sbjct: 121 NSPARFPANAAGEHILDAITRAGGPKGQGFDTWVMLEREGKRTTVPFGQLVYEPQSNIFV 180 Query: 240 HPGDTIYVYREPQTFVAFGASGAQGQFNFEAWRISLAEAVAKAGGLNDSSADPASVFVYR 299 HPGDTIYVYREPQTFVAFGASGAQGQFNFEAWRISLAEAVAKAGGLNDS ADPASVFVYR Sbjct: 181 HPGDTIYVYREPQTFVAFGASGAQGQFNFEAWRISLAEAVAKAGGLNDSLADPASVFVYR 240 Query: 300 GELPEVAAKLGVDVSKYSGPIIPVVYNINFRDPAGYFLATRFQLRNKDVLYASNAASVED 359 GELPEVAAKLGVDVSK++GPIIP+VYNINFRDPAGYFLATRFQLRNKDVLYASNA SVED Sbjct: 241 GELPEVAAKLGVDVSKFTGPIIPIVYNINFRDPAGYFLATRFQLRNKDVLYASNATSVED 300 Query: 360 AKVMQQIRLVTATVNDPIVAAYNATLLRNSIKLAP 394 AKVMQQIRLVTATVNDPIVAAYNATLLRN+IKLAP Sbjct: 301 AKVMQQIRLVTATVNDPIVAAYNATLLRNTIKLAP 335 >ref|YP_578263.1| polysaccharide export protein [Nitrobacter hamburgensis X14] gb|ABE63803.1| polysaccharide export protein [Nitrobacter hamburgensis X14] Length = 440 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 247/388 (63%), Positives = 298/388 (76%), Gaps = 3/388 (0%) Query: 7 IRVMLLLAAACWVSGCHYMPTNGPTSSDVVAGQ--PDPESLPYAMVKITPQIENVLASFA 64 +R + L AA GC +PT GP S+D+ GQ PESLPYA+VK+ P + +LA F Sbjct: 35 VRNISLALAALSCGGCTVVPTTGPQSTDIRMGQAGEQPESLPYALVKLNPDVVRILAQFT 94 Query: 65 PQLAGGIQG-PPPKDIRFGIGDVVSVTIFEAAAGGLFIPVEAGVRPGNYITLPNQNVDTD 123 P+L+ PP RFGIGD +SVTIFEAAAGGLFIPVEAGVRPGN++T+PNQ VD + Sbjct: 95 PKLSSAFANRSPPTAFRFGIGDTISVTIFEAAAGGLFIPVEAGVRPGNFVTIPNQAVDNN 154 Query: 124 GNISVPYAGAIRAKSRTPTEVQRSIVDALKNRAIEPQAVVALIEQRTSLISVLGEVNSPN 183 GNISVPYAGA+RAK +TP EVQ++IV AL NRAIEPQAVV+L++QRTSLISVLG+V+S Sbjct: 155 GNISVPYAGAVRAKGKTPVEVQQAIVSALSNRAIEPQAVVSLVDQRTSLISVLGDVHSAG 214 Query: 184 RFPANAAGEHVLDAITRAGGPKGQGFDTWVMLERDGKRTTVPFGQLVYEPKSNIYAHPGD 243 RFPA+A+GE VLD I RAGGP QG+DTWV LER G R +VPFG LVYEP +NIY P D Sbjct: 215 RFPASASGERVLDVIARAGGPSTQGYDTWVTLERAGHRASVPFGALVYEPSNNIYVLPND 274 Query: 244 TIYVYREPQTFVAFGASGAQGQFNFEAWRISLAEAVAKAGGLNDSSADPASVFVYRGELP 303 TIY+Y +PQTFVAFGA+G QGQ+ F+AWRISLAEAV K GGLNDS ADP SVF+YRGE Sbjct: 275 TIYLYNQPQTFVAFGAAGTQGQYKFDAWRISLAEAVGKHGGLNDSLADPGSVFLYRGETR 334 Query: 304 EVAAKLGVDVSKYSGPIIPVVYNINFRDPAGYFLATRFQLRNKDVLYASNAASVEDAKVM 363 EVA +LGVD S++ GPIIP++YN+N RDP+GYFLA F +RNKDV+Y SN+ VE K + Sbjct: 335 EVAERLGVDCSRFQGPIIPIIYNVNLRDPSGYFLAQAFDIRNKDVIYTSNSPLVETTKFL 394 Query: 364 QQIRLVTATVNDPIVAAYNATLLRNSIK 391 +R + AT NDPIV A NA L+ +I Sbjct: 395 SFLRTIMATANDPIVYATNAYALKAAIN 422 >ref|YP_002360437.1| polysaccharide export protein [Methylocella silvestris BL2] gb|ACK49075.1| polysaccharide export protein [Methylocella silvestris BL2] Length = 410 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 208/373 (55%), Positives = 270/373 (72%), Gaps = 12/373 (3%) Query: 9 VMLLLAAACWVSGCHYMPTNGPTSSDVVAGQPDPESLPYAMVKITPQIENVLASFAPQ-L 67 + LL A V GC + P +GP S DV++ + D +PY +VK+TP+ ++LA++ P+ L Sbjct: 9 ITLLATALIGVGGCSFFPQDGPASVDVLSQKSD--IVPYGLVKLTPETVDILAAYEPKGL 66 Query: 68 AGGIQGP-PPKDIRFGIGDVVSVTIFEAAAGGLFIPVEAGVRPGNYITLPNQNVDTDGNI 126 AG P +I+FG+GD+VS T+FEA AGGLFIP++AG RPGN++TLP+Q VD GNI Sbjct: 67 AGTFTDRRPASNIKFGVGDIVSTTVFEATAGGLFIPLDAGARPGNFVTLPDQAVDDHGNI 126 Query: 127 SVPYAGAIRAKSRTPTEVQRSIVDALKNRAIEPQAVVALIEQRTSLISVLGEVNSPNRF- 185 S P+AG IRA R E+Q IV+ +KNRAIEPQ ++ L +QRTSLISV+GEVN+P RF Sbjct: 127 SFPFAGVIRAAGRNNVEIQNEIVERIKNRAIEPQVIITLAQQRTSLISVIGEVNTPLRFA 186 Query: 186 -PANAAGEHVLDAITRAGGPKGQGFDTWVMLERDGKRTTVPFGQLVYEPKSNIYAHPGDT 244 PA AG+ +LDAITRAGG KGQGF TWVMLER GKR TVPF LV +NIY PGD Sbjct: 187 VPATGAGDRILDAITRAGGIKGQGFSTWVMLERGGKRATVPFENLVMNASNNIYIQPGDR 246 Query: 245 IYVYREPQTFVAFGASGA------QGQFNFEAWRISLAEAVAKAGGLNDSSADPASVFVY 298 IYVY+E Q F+AFGA+GA QG+FNF+AWRI+LAEAVAKAGGL D+ AD ++VF+Y Sbjct: 247 IYVYQEQQKFIAFGATGALDAIGSQGEFNFDAWRINLAEAVAKAGGLQDARADASAVFLY 306 Query: 299 RGELPEVAAKLGVDVSKYSGPIIPVVYNINFRDPAGYFLATRFQLRNKDVLYASNAASVE 358 R E EVA LGVD +++G ++PV++ +N RDP GYF+ATR Q+RN DV+Y SNA S + Sbjct: 307 RREPREVAKLLGVDTGRFAGDLVPVIFQVNLRDPGGYFIATRTQMRNGDVIYVSNAQSND 366 Query: 359 DAKVMQQIRLVTA 371 +K + V + Sbjct: 367 LSKFFNFVNTVAS 379 >ref|YP_001832165.1| polysaccharide export protein [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB94676.1| polysaccharide export protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 400 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 209/367 (56%), Positives = 270/367 (73%), Gaps = 9/367 (2%) Query: 21 GCHYMPTNGPTSSDVVAGQPDPESLPYAMVKITPQIENVLASFAPQ-LAGGIQGP-PPKD 78 GC + P +GP+S+ + A Q P S PY +V +TP+ +V+A+F P+ LAG P + Sbjct: 21 GCAFFPVSGPSSASINA-QSSPTS-PYGLVPLTPETIDVIAAFEPKGLAGTFTDRRPSSN 78 Query: 79 IRFGIGDVVSVTIFEAAAGGLFIPVEAGVRPGNYITLPNQNVDTDGNISVPYAGAIRAKS 138 I+FG+GD+VSVT+FEAAAGGL+IP+EAGVRPGNY+ LP+Q VD DGNI+VPYAGAIRA Sbjct: 79 IKFGVGDIVSVTVFEAAAGGLYIPLEAGVRPGNYVALPDQVVDNDGNITVPYAGAIRAAG 138 Query: 139 RTPTEVQRSIVDALKNRAIEPQAVVALIEQRTSLISVLGEVNSPNRF--PANAAGEHVLD 196 RT ++Q I+ +KNRAIEPQ VVAL +QRTSLIS++GEVN+P RF PA AG+ +LD Sbjct: 139 RTNVQIQNDIIARIKNRAIEPQVVVALSQQRTSLISIIGEVNTPLRFAMPAAGAGDRILD 198 Query: 197 AITRAGGPKGQGFDTWVMLERDGKRTTVPFGQLVYEPKSNIYAHPGDTIYVYREPQTFVA 256 AITRAGG KGQG++TWVMLERD +R TVPF LV +NI+ PGD IYVYRE Q F+A Sbjct: 199 AITRAGGIKGQGYETWVMLERDHRRATVPFENLVMNASNNIFVQPGDRIYVYREQQKFLA 258 Query: 257 FGASGAQGQFNFEAWRISLAEAVAKAGGLNDSSADPASVFVYRGELPEVAAKLGVDVSKY 316 FGA+G QG+F F+AWRI+LAEAVAKA GL D AD S+++YR E EVA +LG+DV+ Sbjct: 259 FGATGNQGEFPFDAWRINLAEAVAKAAGLVDQQADATSIYLYRREPREVARRLGIDVNNI 318 Query: 317 SGPIIPVVYNINFRDPAGYFLATRFQLRNKDVLYASNAASVEDAKVMQQIRLVTAT---V 373 ++PV++ +N RDP GYFLATR Q+RN+D+L+ +NA S E K + + V T + Sbjct: 319 HDELVPVIFTVNLRDPGGYFLATRLQVRNQDILFVANAQSYEIDKFLSFVNHVAVTAHSI 378 Query: 374 NDPIVAA 380 PI A Sbjct: 379 ESPIAGA 385 >ref|YP_001204296.1| putative capsule polysaccharide export outer membrane protein [Bradyrhizobium sp. ORS 278] emb|CAL76059.1| putative capsule polysaccharide export outer membrane protein precursor [Bradyrhizobium sp. ORS 278] Length = 368 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 195/368 (52%), Positives = 259/368 (70%), Gaps = 6/368 (1%) Query: 29 GPTSSDVVAGQPDPESLPYAMVKITPQIENVLASFAPQL--AGGIQGPPPKDIRFGIGDV 86 GP S+D+ + + +LP+A+V++ ++ +L P+ PP IRFGIGD+ Sbjct: 3 GPASTDIQS--ENSTALPFAVVRLDSRVLQILEKSEPRHLPMAFADSRPPSSIRFGIGDI 60 Query: 87 VSVTIFEAAAGGLFIPVEAGVRPGNYITLPNQNVDTDGNISVPYAGAIRAKSRTPTEVQR 146 VSVTIFEA AGGL+IP+EAGVRPGN++T+P+Q VD DGNISVPYAG IRA RT ++Q Sbjct: 61 VSVTIFEATAGGLYIPLEAGVRPGNFVTIPDQAVDNDGNISVPYAGVIRAAGRTNVQIQE 120 Query: 147 SIVDALKNRAIEPQAVVALIEQRTSLISVLGEVNSPNRFPANAAG--EHVLDAITRAGGP 204 I+ +K RAI+PQ VV +QR+SL+SV GEV +P RFP AAG + + DAITRAGG Sbjct: 121 DILSRIKRRAIDPQVVVTSSQQRSSLVSVFGEVRTPVRFPMPAAGAQDRLTDAITRAGGI 180 Query: 205 KGQGFDTWVMLERDGKRTTVPFGQLVYEPKSNIYAHPGDTIYVYREPQTFVAFGASGAQG 264 G G++TWV+LER GKR TVPFG LVY P +NI+ PGD IY+YREP F+AFGA+GAQG Sbjct: 181 SGPGWETWVVLERGGKRATVPFGNLVYYPSNNIFVQPGDRIYLYREPIKFLAFGATGAQG 240 Query: 265 QFNFEAWRISLAEAVAKAGGLNDSSADPASVFVYRGELPEVAAKLGVDVSKYSGPIIPVV 324 +F F+AWRI+LA+AV KAGGL D ADP S+F+YR E EVA +LGV+ S G +P+V Sbjct: 241 EFPFDAWRINLAQAVGKAGGLLDVQADPGSIFLYRRETREVAERLGVNCSNVDGDQVPIV 300 Query: 325 YNINFRDPAGYFLATRFQLRNKDVLYASNAASVEDAKVMQQIRLVTATVNDPIVAAYNAT 384 ++F+DP+GYFLAT+ Q+R D+LY +NA V+ KV+ I V T + I A + Sbjct: 301 IRVSFQDPSGYFLATKLQMRPFDLLYVANAPQVDVTKVLSFINSVAVTAENGITVANDFY 360 Query: 385 LLRNSIKL 392 + R + +L Sbjct: 361 VARANSRL 368