BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0072.0087.p         (102 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001208856.1| putative signal peptide [Bradyrhizobium sp. ...    95   3e-18
ref|YP_004304750.1| hypothetical protein SL003B_3023 [Polymorphu...    39   0.18 
ref|ZP_05851964.1| hypothetical protein HMPREF0446_00792 [Granul...    38   0.44 
ref|YP_001985466.1| hypothetical protein RHECIAT_PC0000846 [Rhiz...    37   0.80 
ref|NP_769005.1| hypothetical protein bll2365 [Bradyrhizobium ja...    35   4.1  

>ref|YP_001208856.1| putative signal peptide [Bradyrhizobium sp. ORS 278]
 emb|CAL80641.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS 278]
          Length = 219

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 5/99 (5%)

Query: 4   FERSGGFSAPRLAMLVM-LVLAVPGGAAMAETPGGLIQ-LSQAVTNFKANPEQLLTQYPN 61
           F RS GF    + + V  LVLA PG  AMA+    ++Q  +   TNFKANPEQ+LTQ PN
Sbjct: 3   FHRSVGFVGVGMRLAVASLVLAGPGAVAMAQP---VVQSAADQATNFKANPEQVLTQNPN 59

Query: 62  AGVELTSRARDFALNDPTSLDPLIALLAKASKDQKTAIS 100
            G EL ++ RD A+NDP +LD LI LLAKA+KDQK AI+
Sbjct: 60  GGAELIAKTRDLAVNDPATLDVLIGLLAKANKDQKAAIA 98


>ref|YP_004304750.1| hypothetical protein SL003B_3023 [Polymorphum gilvum SL003B-26A1]
 gb|ADZ71446.1| hypothetical protein SL003B_3023 [Polymorphum gilvum SL003B-26A1]
          Length = 219

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 32/53 (60%)

Query: 43 QAVTNFKANPEQLLTQYPNAGVELTSRARDFALNDPTSLDPLIALLAKASKDQ 95
          +A++ F  NP+ LL+  P  G  LT++ R  A +D  ++  L+AL  KA+ +Q
Sbjct: 47 EAISAFLGNPDGLLSANPVGGYSLTTQVRSLAGSDTDAISALVALAGKANPEQ 99


>ref|ZP_05851964.1| hypothetical protein HMPREF0446_00792 [Granulicatella elegans ATCC
           700633]
 gb|EEW93910.1| hypothetical protein HMPREF0446_00792 [Granulicatella elegans ATCC
           700633]
          Length = 262

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 16/94 (17%)

Query: 11  SAPRLAMLVMLVLAVPGGAAMA---ETPG-GLIQLSQAVTNFKANPEQLLTQYPNAGVEL 66
           S+ R+  L+ L+L +PG   MA    + G  L+++SQ +  F+   +QL+TQ  N G   
Sbjct: 27  SSKRVFFLLTLILMLPGMIQMAGLFHSLGQDLVEISQQIPEFEVKNQQLITQEKNKGFVY 86

Query: 67  TSRARDFA------------LNDPTSLDPLIALL 88
            + +  F             LN+ +S  P+ ALL
Sbjct: 87  KTDSLIFVFDESGKTTSEDLLNETSSTVPVFALL 120


>ref|YP_001985466.1| hypothetical protein RHECIAT_PC0000846 [Rhizobium etli CIAT 652]
 gb|ACE94916.1| hypothetical protein RHECIAT_PC0000846 [Rhizobium etli CIAT 652]
          Length = 204

 Score = 37.4 bits (85), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 30/53 (56%)

Query: 47 NFKANPEQLLTQYPNAGVELTSRARDFALNDPTSLDPLIALLAKASKDQKTAI 99
          +F + P+ L T+YP  G  ++   R  A +   ++D L+ L A AS  QK+AI
Sbjct: 45 SFSSQPDSLTTKYPTGGAAMSLEVRTLAGSRFDNVDRLVLLAAGASPGQKSAI 97


>ref|NP_769005.1| hypothetical protein bll2365 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47630.1| bll2365 [Bradyrhizobium japonicum USDA 110]
          Length = 249

 Score = 35.0 bits (79), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 37  GLIQLSQAVTNFKANPEQLLTQYPNAGVELTSRARDFALNDPTSLDPLIALLAKASKDQK 96
           G++   +A T+F ANP  LL Q+ +    L S  RD     P +++ + +L   +S DQ 
Sbjct: 73  GIVSAERA-TDFLANPGGLLDQFKDGQGGLASAVRDLLTARPETVEGIASLAKASSADQS 131

Query: 97  TAI 99
            AI
Sbjct: 132 RAI 134