BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0072.0067.p         (119 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001237608.1| hypothetical protein BBta_1483 [Bradyrhizobi...   127   5e-28
ref|ZP_07025869.1| conserved hypothetical protein [Afipia sp. 1N...   120   5e-26
ref|YP_001243185.1| hypothetical protein BBta_7418 [Bradyrhizobi...   108   3e-22
ref|YP_533420.1| hypothetical protein RPC_3562 [Rhodopseudomonas...   100   1e-19
ref|YP_782945.1| hypothetical protein RPE_4039 [Rhodopseudomonas...    90   1e-16

>ref|YP_001237608.1| hypothetical protein BBta_1483 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33702.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 169

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/114 (56%), Positives = 83/114 (72%)

Query: 1   VYALPFFVALNFGMIAFHGGASVIGALLVAIAAGVLTFAVGEITFAGSRSVARRVMIATI 60
           VYALPFFVA+N GM+    GA V GAL+VA+A GV+T A+  I FA ++S+  R +IA++
Sbjct: 35  VYALPFFVAMNAGMLVLQSGAGVPGALIVAVAVGVMTLAIARIAFATTQSLILRAVIASV 94

Query: 61  FAVPAAIAGYNVVLALSQIAVPSLAWREAFAYLGALCVGGTTWTRLTVLARGDP 114
           FA+PA+ AGY+V LA++QI  PSL WRE FA  GA+ +GGT WTRLTV     P
Sbjct: 95  FALPASFAGYHVTLAMAQIGAPSLVWRELFACFGAIFIGGTAWTRLTVFTEPGP 148


>ref|ZP_07025869.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gb|EFI53011.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 160

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/119 (63%), Positives = 86/119 (72%), Gaps = 1/119 (0%)

Query: 1   VYALPFFVALNFGMIAFHGGASVIGALLVAIAAGVLTFAVGEITFAGSRSVARRVMIATI 60
           VYALPFFV L  GM AFHGGA VIGALLV I AG LT  VG+I FA  R +  R  IA  
Sbjct: 25  VYALPFFVGLTAGMAAFHGGAGVIGALLVGIVAGALTLGVGQIAFAVVRPLPLRATIAAA 84

Query: 61  FAVPAAIAGYNVVLALSQIAVPSLAWREAFAYLGALCVGGTTWTRLTVLARGDPSLRAG 119
           FA+PAAIAGY+ VL LSQI +PSL WRE FA++GA+ +GGT WTR+TV A   P LR G
Sbjct: 85  FAIPAAIAGYHAVLGLSQIGIPSLVWREVFAWIGAIFIGGTAWTRMTVFAEPLP-LRPG 142


>ref|YP_001243185.1| hypothetical protein BBta_7418 [Bradyrhizobium sp. BTAi1]
 gb|ABQ39279.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 160

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 80/114 (70%)

Query: 1   VYALPFFVALNFGMIAFHGGASVIGALLVAIAAGVLTFAVGEITFAGSRSVARRVMIATI 60
           VYALPFFV L  GM AFH GA V+GALL+ I  G LT  VG++ FA  + +  R  IA  
Sbjct: 25  VYALPFFVGLTAGMAAFHSGAGVLGALLIGIVVGALTLGVGQVAFALVKPIPLRAAIAAA 84

Query: 61  FAVPAAIAGYNVVLALSQIAVPSLAWREAFAYLGALCVGGTTWTRLTVLARGDP 114
           FA+PAAIAGY+ VL LSQI +PSL WRE FA++GA+ +G T W R+TVLA   P
Sbjct: 85  FAIPAAIAGYHAVLGLSQIGMPSLFWRETFAWVGAIIIGCTAWARMTVLAEPLP 138


>ref|YP_533420.1| hypothetical protein RPC_3562 [Rhodopseudomonas palustris BisB18]
 gb|ABD89101.1| hypothetical protein RPC_3562 [Rhodopseudomonas palustris BisB18]
          Length = 196

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 71/110 (64%)

Query: 1   VYALPFFVALNFGMIAFHGGASVIGALLVAIAAGVLTFAVGEITFAGSRSVARRVMIATI 60
           VYALPFFV +  G+ A   GA  +GA++V I  G     VG+  FA +RS   R+++  +
Sbjct: 63  VYALPFFVGMTAGLYALQTGAGPLGAIIVGIVLGAFALVVGQHAFAVARSTMLRLLMGLL 122

Query: 61  FAVPAAIAGYNVVLALSQIAVPSLAWREAFAYLGALCVGGTTWTRLTVLA 110
           F  PA +AGY++ L L+Q  + S  WREAFA +GA+ VGGT WTR+ +LA
Sbjct: 123 FICPAVVAGYHLTLGLAQFGIDSAGWREAFALVGAVAVGGTAWTRIAMLA 172


>ref|YP_782945.1| hypothetical protein RPE_4039 [Rhodopseudomonas palustris BisA53]
 gb|ABJ07965.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 216

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 70/114 (61%)

Query: 1   VYALPFFVALNFGMIAFHGGASVIGALLVAIAAGVLTFAVGEITFAGSRSVARRVMIATI 60
           V+ALPFFV +  G+ A   GA   GA++V I  G      G++ F+ +RS A R+++  +
Sbjct: 83  VHALPFFVGMMAGLSALQTGAGPFGAIVVGIVFGAFALVAGQLAFSVARSAAFRLVVGLL 142

Query: 61  FAVPAAIAGYNVVLALSQIAVPSLAWREAFAYLGALCVGGTTWTRLTVLARGDP 114
           FA+PAAIAGY + L  + + + S  WR+ FA +GA+ VG T WTR+ +L    P
Sbjct: 143 FALPAAIAGYQLSLGFAHLGIVSEGWRQVFALVGAITVGTTAWTRIAMLVAPQP 196