BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0065.p (379 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07025866.1| conserved hypothetical protein [Afipia sp. 1N... 475 e-132 ref|YP_001243182.1| hypothetical protein BBta_7414 [Bradyrhizobi... 462 e-128 ref|ZP_07026243.1| conserved hypothetical protein [Afipia sp. 1N... 453 e-125 ref|NP_766704.1| hypothetical protein bll0064 [Bradyrhizobium ja... 452 e-125 ref|YP_001239342.1| hypothetical protein BBta_3335 [Bradyrhizobi... 451 e-124 >ref|ZP_07025866.1| conserved hypothetical protein [Afipia sp. 1NLS2] gb|EFI53008.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length = 353 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 245/334 (73%), Positives = 276/334 (82%) Query: 25 LAREAEAVCRHYLSNGKRAGRYWVVGDVRNTPGRSLFVRLQESPKGPAGKWTDAATGEHG 84 LA EAEAVCRHYLSNG+R GRYW+VGDVRN PGRS+FVRL+ES KGPAGKWTDAATGEHG Sbjct: 12 LAGEAEAVCRHYLSNGRREGRYWLVGDVRNAPGRSMFVRLKESAKGPAGKWTDAATGEHG 71 Query: 85 DLLDVIRESLALRDFREVAEEARRFLKLPRSERQPTPERVGPAVLAGSQQAARRLFAMSS 144 DLLDVIRES L DF +VA+EARRFL LPR E +P + GS +AARRLFAMS Sbjct: 72 DLLDVIRESCGLIDFHDVADEARRFLSLPRIEPEPPSKPSRLLAQTGSPEAARRLFAMSQ 131 Query: 145 PIDGTVVEAYLQRRGIARIHHGGSLRFHPRCYYRPDDHLPTETWPAMIACVTNLAGRISG 204 P+ T+VE YL+ RGI +H G+LRFHPRCYYRPDD PTETWPAMIA VT+L GRI+G Sbjct: 132 PVIRTLVETYLRNRGITPLHEDGALRFHPRCYYRPDDQSPTETWPAMIARVTDLDGRITG 191 Query: 205 VHRTWLDPDGFDRVRLGKAPVDTPRRAMGDLLGNAVRFGLADDVLAAGEGIETMLSLRYL 264 HRTWLDPDGFD +RLGKAP+DTPRRAMGDLLGNAVRFG+A+DVLAAGEGIETMLSLR + Sbjct: 192 AHRTWLDPDGFDPIRLGKAPIDTPRRAMGDLLGNAVRFGVANDVLAAGEGIETMLSLRSV 251 Query: 265 LPSLPMTAALSANHLSAMLLPSGLRRLYIARDADAAGDAVQANLTQRAEDAGVEAIALSP 324 LP+LPM AALSANHL+A+LLP L RLYIARD DAAGD LT+RA+ AGVEAI +P Sbjct: 252 LPTLPMAAALSANHLAALLLPPTLHRLYIARDNDAAGDGATIALTERAQSAGVEAITWTP 311 Query: 325 RLGDFNEDLHILGPEALRAALRLQLVPEDVVRFL 358 R GDFNEDL G +ALRAALR++LVP DV RF+ Sbjct: 312 RHGDFNEDLRAFGRDALRAALRVELVPHDVARFM 345 >ref|YP_001243182.1| hypothetical protein BBta_7414 [Bradyrhizobium sp. BTAi1] gb|ABQ39276.1| hypothetical protein BBta_7414 [Bradyrhizobium sp. BTAi1] Length = 354 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 242/335 (72%), Positives = 277/335 (82%) Query: 25 LAREAEAVCRHYLSNGKRAGRYWVVGDVRNTPGRSLFVRLQESPKGPAGKWTDAATGEHG 84 LAR+AE VCRHYLSNG+R GRYW VGD RNTPGRS+FVRL+ES KGPAGKWTDAATGEHG Sbjct: 13 LARDAETVCRHYLSNGRREGRYWQVGDARNTPGRSMFVRLKESSKGPAGKWTDAATGEHG 72 Query: 85 DLLDVIRESLALRDFREVAEEARRFLKLPRSERQPTPERVGPAVLAGSQQAARRLFAMSS 144 DLLD+IRES L DF +VA+EARRFL LPRSE++P+P P GS +AARRLFAMS Sbjct: 73 DLLDIIRESCGLVDFHDVADEARRFLNLPRSEQEPSPNSARPPAQTGSPEAARRLFAMSQ 132 Query: 145 PIDGTVVEAYLQRRGIARIHHGGSLRFHPRCYYRPDDHLPTETWPAMIACVTNLAGRISG 204 P+ T+ E YL+ RGI +H G+LRFHPRCYYRPDD+ PTE WPAMIA VT+L GRI+G Sbjct: 133 PMMRTLAETYLRNRGITPLHEAGALRFHPRCYYRPDDYSPTEIWPAMIARVTDLDGRITG 192 Query: 205 VHRTWLDPDGFDRVRLGKAPVDTPRRAMGDLLGNAVRFGLADDVLAAGEGIETMLSLRYL 264 HRTWL+P GFD VRLGKAP+DTPRRAMGDLLGNAVRFG+A DVLAAGEGIETMLSLR + Sbjct: 193 AHRTWLNPAGFDLVRLGKAPIDTPRRAMGDLLGNAVRFGVATDVLAAGEGIETMLSLRCV 252 Query: 265 LPSLPMTAALSANHLSAMLLPSGLRRLYIARDADAAGDAVQANLTQRAEDAGVEAIALSP 324 LP+LPM AALSANHL+A+LLP LRRLYIARD DAAGD LT+RA AGVEAI +P Sbjct: 253 LPTLPMAAALSANHLAALLLPPTLRRLYIARDNDAAGDGAAIALTERARSAGVEAITWTP 312 Query: 325 RLGDFNEDLHILGPEALRAALRLQLVPEDVVRFLH 359 R GDFNEDL +G + L AALR++L+P+DV RF+H Sbjct: 313 RRGDFNEDLRGIGVDVLAAALRIELIPQDVARFMH 347 >ref|ZP_07026243.1| conserved hypothetical protein [Afipia sp. 1NLS2] gb|EFI53385.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length = 351 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 234/335 (69%), Positives = 270/335 (80%), Gaps = 1/335 (0%) Query: 25 LAREAEAVCRHYLSNGKRAGRYWVVGDVRNTPGRSLFVRLQESPKGPAGKWTDAATGEHG 84 LAR+AEAVCRHYLS G+R GRYW+VGDVRNTPGRS+FVRL+ES KGPAGKWTDAATGEHG Sbjct: 13 LARDAEAVCRHYLSAGRREGRYWLVGDVRNTPGRSMFVRLKESVKGPAGKWTDAATGEHG 72 Query: 85 DLLDVIRESLALRDFREVAEEARRFLKLPRSERQPTPERV-GPAVLAGSQQAARRLFAMS 143 DLLDVI+ES L DF++VA+EAR FL LP E +P R PA GS +AARRLFAMS Sbjct: 73 DLLDVIQESCGLIDFKDVADEARSFLSLPHPEPEPDRHRSRAPAAPTGSPEAARRLFAMS 132 Query: 144 SPIDGTVVEAYLQRRGIARIHHGGSLRFHPRCYYRPDDHLPTETWPAMIACVTNLAGRIS 203 PI T+VE YL RGI +H GSLRFHPRCYYRPD+H PTETWPAMIA VT+L G ++ Sbjct: 133 QPISRTLVETYLSNRGITFLHGTGSLRFHPRCYYRPDEHSPTETWPAMIASVTDLEGHLT 192 Query: 204 GVHRTWLDPDGFDRVRLGKAPVDTPRRAMGDLLGNAVRFGLADDVLAAGEGIETMLSLRY 263 G HRTWLDP F LGKAP+DTPRRAMGDLLG+AVRFG+A +V+AAGEGIETMLSLR Sbjct: 193 GAHRTWLDPGDFTEATLGKAPIDTPRRAMGDLLGHAVRFGVAGEVMAAGEGIETMLSLRC 252 Query: 264 LLPSLPMTAALSANHLSAMLLPSGLRRLYIARDADAAGDAVQANLTQRAEDAGVEAIALS 323 +LP++P+ AALSA HLSA+L P LRRLYIARD D AGD A L RA +AG+EAI +S Sbjct: 253 VLPTMPLVAALSAAHLSAILFPDTLRRLYIARDDDPAGDGAMATLIDRAREAGIEAIVIS 312 Query: 324 PRLGDFNEDLHILGPEALRAALRLQLVPEDVVRFL 358 PRLGDFNEDL +LG +ALRAA R+Q+ +DV RF+ Sbjct: 313 PRLGDFNEDLRLLGIDALRAASRVQIAAQDVARFM 347 >ref|NP_766704.1| hypothetical protein bll0064 [Bradyrhizobium japonicum USDA 110] dbj|BAC45329.1| bll0064 [Bradyrhizobium japonicum USDA 110] Length = 352 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 231/335 (68%), Positives = 273/335 (81%), Gaps = 1/335 (0%) Query: 25 LAREAEAVCRHYLSNGKRAGRYWVVGDVRNTPGRSLFVRLQESPKGPAGKWTDAATGEHG 84 L R+AE+VCRHYLS G+R G YW+VGDVRNTPGRS+FVRL++S KG AGKWTDAATGEHG Sbjct: 14 LGRQAESVCRHYLSAGRREGSYWLVGDVRNTPGRSMFVRLKQSAKGAAGKWTDAATGEHG 73 Query: 85 DLLDVIRESLALRDFREVAEEARRFLKLPRSERQPTPERVGPAVLA-GSQQAARRLFAMS 143 DLLDVIRES L DF+ V +EAR FL LP E +P R+ + A GS +AARRLFAMS Sbjct: 74 DLLDVIRESCRLVDFKNVLDEARLFLSLPHPEPEPNQPRLRNSSAARGSPEAARRLFAMS 133 Query: 144 SPIDGTVVEAYLQRRGIARIHHGGSLRFHPRCYYRPDDHLPTETWPAMIACVTNLAGRIS 203 PI+ T++EAYL+ RGI +H GSLRFHPRCYYRPDDH PTETWPAMIA VT+L+G ++ Sbjct: 134 QPIERTLIEAYLRNRGITSLHETGSLRFHPRCYYRPDDHSPTETWPAMIAAVTDLSGELA 193 Query: 204 GVHRTWLDPDGFDRVRLGKAPVDTPRRAMGDLLGNAVRFGLADDVLAAGEGIETMLSLRY 263 GVHRTWLDP GF LGKAP+DTP+RAMGDLLG+AVRFG+A +V+AAGEGIETMLSLR Sbjct: 194 GVHRTWLDPHGFSEATLGKAPIDTPKRAMGDLLGHAVRFGVAGEVMAAGEGIETMLSLRC 253 Query: 264 LLPSLPMTAALSANHLSAMLLPSGLRRLYIARDADAAGDAVQANLTQRAEDAGVEAIALS 323 LP++PM AALSA HLSA+LLP LRRLYIARD D AGD A L RA++AG+EAI +S Sbjct: 254 ALPTMPMVAALSAAHLSAVLLPDTLRRLYIARDDDPAGDGAMATLMDRAQEAGIEAIVIS 313 Query: 324 PRLGDFNEDLHILGPEALRAALRLQLVPEDVVRFL 358 P+LGDFNEDL +LG +ALRAA R+Q+ +DV RF+ Sbjct: 314 PQLGDFNEDLRLLGFDALRAASRVQIAAQDVARFM 348 >ref|YP_001239342.1| hypothetical protein BBta_3335 [Bradyrhizobium sp. BTAi1] gb|ABQ35436.1| hypothetical protein BBta_3335 [Bradyrhizobium sp. BTAi1] Length = 351 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 232/335 (69%), Positives = 261/335 (77%), Gaps = 1/335 (0%) Query: 25 LAREAEAVCRHYLSNGKRAGRYWVVGDVRNTPGRSLFVRLQESPKGPAGKWTDAATGEHG 84 LAREAEAVCRHYLSNG+R G YW+VGD+ NTPGRSLFVRL S KGPAGKWTDAATGEHG Sbjct: 12 LAREAEAVCRHYLSNGRREGCYWLVGDINNTPGRSLFVRLHASSKGPAGKWTDAATGEHG 71 Query: 85 DLLDVIRESLALRDFREVAEEARRFLKLPRSERQPTPERVGPAVLAGSQQAARRLFAMSS 144 DLLDVI + ALR FRE+AEEARRFL+LPR +R P E P +AARRLFAMS Sbjct: 72 DLLDVIGTTCALRSFREIAEEARRFLRLPRWQRDPAIEPKAPGRSRDPIKAARRLFAMSQ 131 Query: 145 PIDGTVVEAYLQRRGI-ARIHHGGSLRFHPRCYYRPDDHLPTETWPAMIACVTNLAGRIS 203 P+ GT+ EAYL RGI +LRFHP+C+YRPDD ETWPA+IA VT+L I+ Sbjct: 132 PLTGTLGEAYLANRGIDPPAATAAALRFHPQCFYRPDDTTTIETWPALIAAVTDLDDCIT 191 Query: 204 GVHRTWLDPDGFDRVRLGKAPVDTPRRAMGDLLGNAVRFGLADDVLAAGEGIETMLSLRY 263 GVHRTWLDPDGFD RLGKAP++TPRRAMGDLLG+AVRFG+ADDV+AAGEGIETMLSLR Sbjct: 192 GVHRTWLDPDGFDDRRLGKAPIETPRRAMGDLLGHAVRFGIADDVMAAGEGIETMLSLRT 251 Query: 264 LLPSLPMTAALSANHLSAMLLPSGLRRLYIARDADAAGDAVQANLTQRAEDAGVEAIALS 323 +LPSLP+ AALSANHL+ +L P+ LRRLY+A DADAAG +LT RA DAG+EAIAL Sbjct: 252 VLPSLPVAAALSANHLATLLSPATLRRLYVAVDADAAGINAAKSLTARALDAGIEAIALC 311 Query: 324 PRLGDFNEDLHILGPEALRAALRLQLVPEDVVRFL 358 PRLGDFNEDL G LR LR QL PED R L Sbjct: 312 PRLGDFNEDLRAFGKAQLRDMLRHQLSPEDAARSL 346