BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0063.p (552 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001237602.1| putative methylase/helicase [Bradyrhizobium ... 987 0.0 ref|ZP_07025865.1| putative methylase/helicase [Afipia sp. 1NLS2... 964 0.0 ref|ZP_06888630.1| putative methylase/helicase [Methylosinus tri... 937 0.0 ref|YP_001243181.1| putative methylase/helicase [Bradyrhizobium ... 934 0.0 ref|ZP_06888424.1| putative methylase/helicase [Methylosinus tri... 932 0.0 >ref|YP_001237602.1| putative methylase/helicase [Bradyrhizobium sp. BTAi1] gb|ABQ33696.1| putative methylase/helicase [Bradyrhizobium sp. BTAi1] Length = 1435 Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust. Identities = 476/552 (86%), Positives = 517/552 (93%) Query: 1 MKTPSLIRSIERDLDAGHAAVIQIVSTGEALMERRLAEIPTEDWGDVQVDITPREYVLDY 60 MKTPSLIRSIERDLDAGHAAVIQIVSTGEALMERRLAEIPTE+WGDVQVDITPREYVLDY Sbjct: 795 MKTPSLIRSIERDLDAGHAAVIQIVSTGEALMERRLAEIPTEEWGDVQVDITPREYVLDY 854 Query: 61 LAFSFPVQLYEPFTDSEGNPCSRPVYRDGQPVESREAVLRRDRLIEKLASLPPVPGALDQ 120 LA SFPVQLYEPF+DSEGN CSRPVYRDGQPVESREAV RRDRLIEKLASL PVPGALDQ Sbjct: 855 LAHSFPVQLYEPFSDSEGNLCSRPVYRDGQPVESREAVARRDRLIEKLASLSPVPGALDQ 914 Query: 121 VIQRFGTDMVAEVTGRSRRIVRKHGRLVVESRAGSANLAETSAFMDDVKRVLVFSDAGGT 180 ++QRFGTDMVAEVTGRSRR++R+ RLVVESRA SANLAET+AFMDD KR+LVFSDAGGT Sbjct: 915 IVQRFGTDMVAEVTGRSRRVIRRGSRLVVESRAASANLAETTAFMDDAKRILVFSDAGGT 974 Query: 181 GRSYHAELSARNRRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIATDVKAEKR 240 GRSYHAELSARN RLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIAT+VKAEKR Sbjct: 975 GRSYHAELSARNHRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIATNVKAEKR 1034 Query: 241 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESRYGRDALRQLYTLLVRGRIDGCSL 300 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLES+YGRDALRQLYTLL RG+++GCSL Sbjct: 1035 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESQYGRDALRQLYTLLARGKVEGCSL 1094 Query: 301 ERFEDATGLQLTDANGLRDELPPITTFLNRLLALTIDLQNVLFTVFEQLLMARIEGAVAS 360 E FEDATGL+L DA+GL+DELPPITTFLNRLLAL I+LQN+LFT FEQLL ARIEGA+AS Sbjct: 1095 EAFEDATGLKLVDASGLKDELPPITTFLNRLLALAIELQNILFTAFEQLLSARIEGAIAS 1154 Query: 361 GTYDIGLETLRAESFVVCDRRTVYTHPGTGAQTRLLTLTQRWRNHPLSLDEALARLSDHR 420 GTYD+GLETLRAESFVV DRR +Y HP TGA+TRLLT+TQR RN P+SLDEAL+RLSD R Sbjct: 1155 GTYDVGLETLRAESFVVTDRRAIYVHPATGAETRLLTITQRERNRPVSLDEALSRLSDRR 1214 Query: 421 AIPLFNERSARAAVQLPAPSFMLDDGEIERRIRLIRPMEQHSVSLNMMAESHWAESDRER 480 A+ L NERS RAA+Q+PAPSFMLDDGEIE R+RLIRPMEQHSV L MMAESHW E+DRER Sbjct: 1215 AVLLINERSNRAALQIPAPSFMLDDGEIESRVRLIRPMEQHSVPLKMMAESHWVEADRER 1274 Query: 481 FAAAWLAELAELPEFSESTIHVVAGLLLPIWKRLPNESSRVYRLQTDAGERIIGRKVSAA 540 F+AAW AELA++PEFS+STIH+VAGLLLPIWKRLP+ES+RVYRLQTDAGER+IGRKVSA Sbjct: 1275 FSAAWRAELADIPEFSDSTIHIVAGLLLPIWKRLPDESARVYRLQTDAGERVIGRKVSAT 1334 Query: 541 WVANVLAAXRPR 552 WVA+VL P+ Sbjct: 1335 WVASVLEGDAPK 1346 >ref|ZP_07025865.1| putative methylase/helicase [Afipia sp. 1NLS2] gb|EFI53007.1| putative methylase/helicase [Afipia sp. 1NLS2] Length = 1445 Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/551 (85%), Positives = 507/551 (92%) Query: 1 MKTPSLIRSIERDLDAGHAAVIQIVSTGEALMERRLAEIPTEDWGDVQVDITPREYVLDY 60 MKTPSLIRSIERDL+ GHAAVIQIVSTGEALMERRLAEIPTEDW DVQVDITPREYVLDY Sbjct: 799 MKTPSLIRSIERDLELGHAAVIQIVSTGEALMERRLAEIPTEDWNDVQVDITPREYVLDY 858 Query: 61 LAFSFPVQLYEPFTDSEGNPCSRPVYRDGQPVESREAVLRRDRLIEKLASLPPVPGALDQ 120 LA SFPVQLYEPFTDSEGN SRPVYRDGQPVESREA+ RRDRLIEKLASLPPVPGALDQ Sbjct: 859 LAHSFPVQLYEPFTDSEGNLSSRPVYRDGQPVESREALARRDRLIEKLASLPPVPGALDQ 918 Query: 121 VIQRFGTDMVAEVTGRSRRIVRKHGRLVVESRAGSANLAETSAFMDDVKRVLVFSDAGGT 180 ++QRFGTD+VAEVTGRSRR+VRK RL+VE+RAGSANLAET+AFMDD KR+LVFSDAGGT Sbjct: 919 IVQRFGTDLVAEVTGRSRRVVRKGDRLMVENRAGSANLAETAAFMDDAKRILVFSDAGGT 978 Query: 181 GRSYHAELSARNRRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIATDVKAEKR 240 GRSYHAELSARNRRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIAT+VKAEKR Sbjct: 979 GRSYHAELSARNRRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIATNVKAEKR 1038 Query: 241 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESRYGRDALRQLYTLLVRGRIDGCSL 300 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLES YGRDALRQLY LLVRG+++GCSL Sbjct: 1039 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESHYGRDALRQLYMLLVRGKVEGCSL 1098 Query: 301 ERFEDATGLQLTDANGLRDELPPITTFLNRLLALTIDLQNVLFTVFEQLLMARIEGAVAS 360 FED+TGL+L DANG++DELPPITTFLNRLLALTIDLQNVLFT FEQLL ARIEGA+AS Sbjct: 1099 RTFEDSTGLKLMDANGIKDELPPITTFLNRLLALTIDLQNVLFTAFEQLLTARIEGAIAS 1158 Query: 361 GTYDIGLETLRAESFVVCDRRTVYTHPGTGAQTRLLTLTQRWRNHPLSLDEALARLSDHR 420 GTYD+GLETLRAESFVV DR +YTHP TGA+TRLLT+T+R RN P++L EA RLSD R Sbjct: 1159 GTYDVGLETLRAESFVVTDRSAIYTHPATGAETRLLTITERRRNQPVTLGEAFDRLSDPR 1218 Query: 421 AIPLFNERSARAAVQLPAPSFMLDDGEIERRIRLIRPMEQHSVSLNMMAESHWAESDRER 480 ++ L NERS RA VQ+PAPS MLDDGEIERR+RLIRPME HS+ L +MAESHWAE+DR Sbjct: 1219 SVLLINERSGRATVQVPAPSLMLDDGEIERRVRLIRPMEHHSLPLKVMAESHWAEADRAH 1278 Query: 481 FAAAWLAELAELPEFSESTIHVVAGLLLPIWKRLPNESSRVYRLQTDAGERIIGRKVSAA 540 FAAAW AEL+E+PEF++STIHVVAGLLLPIWKRLPNES+RVYRLQTDAGE IIGRKVS A Sbjct: 1279 FAAAWQAELSEVPEFTDSTIHVVAGLLLPIWKRLPNESTRVYRLQTDAGECIIGRKVSPA 1338 Query: 541 WVANVLAAXRP 551 WVA LA P Sbjct: 1339 WVATTLATDAP 1349 >ref|ZP_06888630.1| putative methylase/helicase [Methylosinus trichosporium OB3b] gb|EFH02898.1| putative methylase/helicase [Methylosinus trichosporium OB3b] Length = 1441 Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/547 (82%), Positives = 494/547 (90%) Query: 1 MKTPSLIRSIERDLDAGHAAVIQIVSTGEALMERRLAEIPTEDWGDVQVDITPREYVLDY 60 MKTP+LIRSIERD++ GHAAV+QIVSTGEALMERRL+EIPTE+W DVQVDITPREYVLDY Sbjct: 795 MKTPTLIRSIERDMEEGHAAVVQIVSTGEALMERRLSEIPTEEWNDVQVDITPREYVLDY 854 Query: 61 LAFSFPVQLYEPFTDSEGNPCSRPVYRDGQPVESREAVLRRDRLIEKLASLPPVPGALDQ 120 LA SFPVQLYEPFTDSEGN SRPV+RDGQPVESREAV RR LIEKLASL PVPGALDQ Sbjct: 855 LAHSFPVQLYEPFTDSEGNLSSRPVFRDGQPVESREAVARRTALIEKLASLSPVPGALDQ 914 Query: 121 VIQRFGTDMVAEVTGRSRRIVRKHGRLVVESRAGSANLAETSAFMDDVKRVLVFSDAGGT 180 ++QRFGTDMVAEVTGRSRRIVRK RL VESRAGSANLAET+AFMDD K +LVFSDAGGT Sbjct: 915 IVQRFGTDMVAEVTGRSRRIVRKGERLAVESRAGSANLAETAAFMDDQKCILVFSDAGGT 974 Query: 181 GRSYHAELSARNRRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIATDVKAEKR 240 GRSYHAELSARNRRLRVHYLLEPGWKAD AIQGLGRTNRTNQAQPPLFRPIATDVKAEKR Sbjct: 975 GRSYHAELSARNRRLRVHYLLEPGWKADTAIQGLGRTNRTNQAQPPLFRPIATDVKAEKR 1034 Query: 241 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESRYGRDALRQLYTLLVRGRIDGCSL 300 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLES Y RDALRQLY LLVRG+I+GCSL Sbjct: 1035 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESHYARDALRQLYLLLVRGKIEGCSL 1094 Query: 301 ERFEDATGLQLTDANGLRDELPPITTFLNRLLALTIDLQNVLFTVFEQLLMARIEGAVAS 360 + FE+ATGL LTD+NG++DELPPITTFLNRLLALTI LQ VLFT FEQLL ++EGA+A+ Sbjct: 1095 QSFEEATGLSLTDSNGIKDELPPITTFLNRLLALTIQLQGVLFTAFEQLLNTKVEGAIAA 1154 Query: 361 GTYDIGLETLRAESFVVCDRRTVYTHPGTGAQTRLLTLTQRWRNHPLSLDEALARLSDHR 420 G YD+GLETLRAESF+V DRRT+Y HPGTGA+TRLLT+ QR RNHPL+LD L L+D R Sbjct: 1155 GVYDVGLETLRAESFLVTDRRTIYVHPGTGAETRLLTIMQRERNHPLTLDRGLELLADRR 1214 Query: 421 AIPLFNERSARAAVQLPAPSFMLDDGEIERRIRLIRPMEQHSVSLNMMAESHWAESDRER 480 A PL NERS RAA+QLPAPS MLDDGEIE+R+RLIRPMEQH SL MM ESHW E+DR Sbjct: 1215 ATPLVNERSGRAAIQLPAPSLMLDDGEIEKRVRLIRPMEQHYASLKMMEESHWIEADRHA 1274 Query: 481 FAAAWLAELAELPEFSESTIHVVAGLLLPIWKRLPNESSRVYRLQTDAGERIIGRKVSAA 540 FAAAW E+A +PEFS+STIH+VAGLLLPIWKRLP +S+RVYRLQTD GERIIGR+V+AA Sbjct: 1275 FAAAWSTEVAAVPEFSDSTIHIVAGLLLPIWKRLPKDSTRVYRLQTDDGERIIGRRVTAA 1334 Query: 541 WVANVLA 547 WVA LA Sbjct: 1335 WVAGALA 1341 >ref|YP_001243181.1| putative methylase/helicase [Bradyrhizobium sp. BTAi1] gb|ABQ39275.1| putative methylase/helicase [Bradyrhizobium sp. BTAi1] Length = 1444 Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust. Identities = 451/538 (83%), Positives = 495/538 (92%) Query: 1 MKTPSLIRSIERDLDAGHAAVIQIVSTGEALMERRLAEIPTEDWGDVQVDITPREYVLDY 60 MKTPSL+RSIERDL+AGHA+V+QIVSTGEALMERRLAEIPTEDWGDVQVDITPREYVLDY Sbjct: 798 MKTPSLVRSIERDLEAGHASVVQIVSTGEALMERRLAEIPTEDWGDVQVDITPREYVLDY 857 Query: 61 LAFSFPVQLYEPFTDSEGNPCSRPVYRDGQPVESREAVLRRDRLIEKLASLPPVPGALDQ 120 LA SFPVQLYEPFTDSEGN SRPV+RDGQPVESREAV RRDRLIEKLASLPPVPGALDQ Sbjct: 858 LAHSFPVQLYEPFTDSEGNLSSRPVFRDGQPVESREAVTRRDRLIEKLASLPPVPGALDQ 917 Query: 121 VIQRFGTDMVAEVTGRSRRIVRKHGRLVVESRAGSANLAETSAFMDDVKRVLVFSDAGGT 180 ++QRFGTDMVAEVTGRSRR++RK RL+VE+RA SANLAET+AFMDD KR+LVFS+AGGT Sbjct: 918 IVQRFGTDMVAEVTGRSRRVIRKGDRLMVENRAASANLAETAAFMDDAKRILVFSEAGGT 977 Query: 181 GRSYHAELSARNRRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIATDVKAEKR 240 GRSYHAELSARN RLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIAT+VKAEKR Sbjct: 978 GRSYHAELSARNHRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIATNVKAEKR 1037 Query: 241 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESRYGRDALRQLYTLLVRGRIDGCSL 300 FLSTIARRLDTLGAITRGQRQTGGQ LFRPEDNLES YGRDALRQLY LL RG+++GCSL Sbjct: 1038 FLSTIARRLDTLGAITRGQRQTGGQNLFRPEDNLESHYGRDALRQLYMLLARGKVEGCSL 1097 Query: 301 ERFEDATGLQLTDANGLRDELPPITTFLNRLLALTIDLQNVLFTVFEQLLMARIEGAVAS 360 + FED+TGL+L DANG++DELPPITTFLNRLLALTIDLQNVLFT FEQLL ARIEGA+AS Sbjct: 1098 QTFEDSTGLKLMDANGIKDELPPITTFLNRLLALTIDLQNVLFTAFEQLLTARIEGAIAS 1157 Query: 361 GTYDIGLETLRAESFVVCDRRTVYTHPGTGAQTRLLTLTQRWRNHPLSLDEALARLSDHR 420 G+YD GLETLRAESFV+ DR +Y+HP TGA+TRLLT+T+R RN P++L EA RLSD R Sbjct: 1158 GSYDAGLETLRAESFVITDRSVIYSHPATGAETRLLTITERRRNLPVTLAEAFDRLSDPR 1217 Query: 421 AIPLFNERSARAAVQLPAPSFMLDDGEIERRIRLIRPMEQHSVSLNMMAESHWAESDRER 480 A+ L NERS RAAVQ+PAPS MLDDGEIERR+RLIRPME HS+ L MAESHW E++RER Sbjct: 1218 AVLLINERSGRAAVQVPAPSLMLDDGEIERRVRLIRPMEHHSLPLKTMAESHWMEANRER 1277 Query: 481 FAAAWLAELAELPEFSESTIHVVAGLLLPIWKRLPNESSRVYRLQTDAGERIIGRKVS 538 FA AW EL E+ +F++STIHVVAGLLLPIWKRLPNES+RVYRLQTD GERIIGRKVS Sbjct: 1278 FAEAWHVELGEVSDFTDSTIHVVAGLLLPIWKRLPNESTRVYRLQTDTGERIIGRKVS 1335 >ref|ZP_06888424.1| putative methylase/helicase [Methylosinus trichosporium OB3b] gb|EFH03061.1| putative methylase/helicase [Methylosinus trichosporium OB3b] Length = 1442 Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/548 (84%), Positives = 502/548 (91%) Query: 1 MKTPSLIRSIERDLDAGHAAVIQIVSTGEALMERRLAEIPTEDWGDVQVDITPREYVLDY 60 MKTP+LIRSI+RDL GHA V+QIVSTGEALMERRLAEIPTE+W DV+VDITPREYVLDY Sbjct: 796 MKTPTLIRSIDRDLGEGHAVVVQIVSTGEALMERRLAEIPTEEWNDVRVDITPREYVLDY 855 Query: 61 LAFSFPVQLYEPFTDSEGNPCSRPVYRDGQPVESREAVLRRDRLIEKLASLPPVPGALDQ 120 LA SFPVQLYEPFTDSEGN SRPV+RDGQPVESREAV RRDRLIE+LASLPPVPGALDQ Sbjct: 856 LAHSFPVQLYEPFTDSEGNLSSRPVFRDGQPVESREAVARRDRLIEQLASLPPVPGALDQ 915 Query: 121 VIQRFGTDMVAEVTGRSRRIVRKHGRLVVESRAGSANLAETSAFMDDVKRVLVFSDAGGT 180 ++QRFG DMVAEVTGRSRRIVRK RLVVESRAGSANLAET+AFMDD KR+LVFSDAGGT Sbjct: 916 IVQRFGADMVAEVTGRSRRIVRKGDRLVVESRAGSANLAETAAFMDDQKRILVFSDAGGT 975 Query: 181 GRSYHAELSARNRRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIATDVKAEKR 240 GRSYHAELSARN RLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIATDVKAEKR Sbjct: 976 GRSYHAELSARNHRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIATDVKAEKR 1035 Query: 241 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESRYGRDALRQLYTLLVRGRIDGCSL 300 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESRY DALRQLY LLVRG+IDGCSL Sbjct: 1036 FLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESRYACDALRQLYLLLVRGKIDGCSL 1095 Query: 301 ERFEDATGLQLTDANGLRDELPPITTFLNRLLALTIDLQNVLFTVFEQLLMARIEGAVAS 360 + FE+ATGL LTD+NG++D+LPPITTFLNRLLALTI+LQ VLFT FEQLL A+IEGA+A+ Sbjct: 1096 QTFEEATGLSLTDSNGIKDDLPPITTFLNRLLALTIELQGVLFTAFEQLLNAKIEGAIAA 1155 Query: 361 GTYDIGLETLRAESFVVCDRRTVYTHPGTGAQTRLLTLTQRWRNHPLSLDEALARLSDHR 420 G YD+GLETLRAESF+V DRRT+Y HPGTGA+TRLLT+TQR RNHPL+LD AL L+D R Sbjct: 1156 GVYDVGLETLRAESFLVTDRRTIYVHPGTGAETRLLTITQRERNHPLTLDRALDLLADRR 1215 Query: 421 AIPLFNERSARAAVQLPAPSFMLDDGEIERRIRLIRPMEQHSVSLNMMAESHWAESDRER 480 AIPL NERS RAAVQLPAPS MLDDGEIERR+RLIRPMEQH SL M ESHW E+DR+ Sbjct: 1216 AIPLVNERSGRAAVQLPAPSLMLDDGEIERRVRLIRPMEQHYASLKMREESHWTEADRDA 1275 Query: 481 FAAAWLAELAELPEFSESTIHVVAGLLLPIWKRLPNESSRVYRLQTDAGERIIGRKVSAA 540 FAAAW AE+A +PEFS+STIH+VAGLLLPIWKRLP +S+RVYRLQTD GERIIGR+V+ A Sbjct: 1276 FAAAWSAEVAAVPEFSDSTIHIVAGLLLPIWKRLPKDSTRVYRLQTDDGERIIGRRVTPA 1335 Query: 541 WVANVLAA 548 WVA LA+ Sbjct: 1336 WVAGALAS 1343