BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0072.0058.p         (104 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_07026247.1| ParB domain protein nuclease [Afipia sp. 1NLS...   122   1e-26
ref|ZP_08074826.1| ParB domain protein nuclease [Methylocystis s...   122   2e-26
ref|YP_001237595.1| putative plasmid stabilization protein [Brad...   121   3e-26
ref|YP_001243171.1| putative chromosome partitioning protein par...   121   4e-26
ref|NP_768572.1| hypothetical protein blr1932 [Bradyrhizobium ja...   120   5e-26

>ref|ZP_07026247.1| ParB domain protein nuclease [Afipia sp. 1NLS2]
 gb|EFI53389.1| ParB domain protein nuclease [Afipia sp. 1NLS2]
          Length = 708

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/72 (80%), Positives = 67/72 (93%)

Query: 1  MAKAVQKIKLSSSRDIPFSKLILSQNNVRRLKAGISIEDLAEDIARRSLLQSLNVRPVLD 60
          MA AVQKI LSSSRDIPF+KL+LSQ+NVRR+KAG+SIE+LA+DI RR+LLQSLNVRPVLD
Sbjct: 1  MATAVQKITLSSSRDIPFNKLVLSQSNVRRVKAGVSIEELAQDIGRRTLLQSLNVRPVLD 60

Query: 61 DEGRETGMFEVP 72
           EG ETGMFE+P
Sbjct: 61 AEGAETGMFEIP 72


>ref|ZP_08074826.1| ParB domain protein nuclease [Methylocystis sp. ATCC 49242]
 gb|EFX97529.1| ParB domain protein nuclease [Methylocystis sp. ATCC 49242]
          Length = 714

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/72 (77%), Positives = 69/72 (95%)

Query: 1  MAKAVQKIKLSSSRDIPFSKLILSQNNVRRLKAGISIEDLAEDIARRSLLQSLNVRPVLD 60
          M K+VQKI+LS+SRDIPFSKL+LSQ+NVRR+KAG+SIE+LAEDIARR+LLQS+ VRPV+D
Sbjct: 1  MIKSVQKIQLSASRDIPFSKLVLSQSNVRRIKAGVSIEELAEDIARRTLLQSITVRPVVD 60

Query: 61 DEGRETGMFEVP 72
          D+G ETGMFE+P
Sbjct: 61 DQGAETGMFEIP 72


>ref|YP_001237595.1| putative plasmid stabilization protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ33689.1| putative plasmid stabilization protein [Bradyrhizobium sp. BTAi1]
          Length = 129

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/72 (80%), Positives = 66/72 (91%)

Query: 1  MAKAVQKIKLSSSRDIPFSKLILSQNNVRRLKAGISIEDLAEDIARRSLLQSLNVRPVLD 60
          MAKAVQKI LS SRDIPF+KL+LSQ+NVRR+KAG+SIE LAE IA+R+LLQSLNVR V+D
Sbjct: 1  MAKAVQKIMLSPSRDIPFNKLVLSQSNVRRVKAGVSIEQLAESIAQRTLLQSLNVRAVVD 60

Query: 61 DEGRETGMFEVP 72
          DEG ETGMFEVP
Sbjct: 61 DEGNETGMFEVP 72


>ref|YP_001243171.1| putative chromosome partitioning protein parB [Bradyrhizobium sp.
          BTAi1]
 gb|ABQ39265.1| putative chromosome partitioning protein parB [Bradyrhizobium sp.
          BTAi1]
          Length = 133

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/73 (83%), Positives = 66/73 (90%), Gaps = 1/73 (1%)

Query: 1  MAKAVQKIKLSSSRDIPFSKLILSQNNVRRLKAGISIEDLAEDIARR-SLLQSLNVRPVL 59
          MA AVQKI LSSSRDIP +KLILSQ+NVRR+KAG+SIEDLA DIARR  LLQSLNVRPVL
Sbjct: 1  MASAVQKITLSSSRDIPLNKLILSQSNVRRVKAGVSIEDLAADIARRGCLLQSLNVRPVL 60

Query: 60 DDEGRETGMFEVP 72
          D+EG ETGMFEVP
Sbjct: 61 DEEGVETGMFEVP 73


>ref|NP_768572.1| hypothetical protein blr1932 [Bradyrhizobium japonicum USDA 110]
 gb|AAG60910.1|AF322013_29 ID489 [Bradyrhizobium japonicum]
 dbj|BAC47197.1| blr1932 [Bradyrhizobium japonicum USDA 110]
          Length = 726

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 68/72 (94%), Gaps = 1/72 (1%)

Query: 1  MAKAVQKIKLSSSRDIPFSKLILSQNNVRRLKAGISIEDLAEDIARRSLLQSLNVRPVLD 60
          MA AVQKI LSSSRDIPF+KL+LSQ+NVRR+KAG+SIE+LAEDIARR+LLQSLNVRPVLD
Sbjct: 20 MATAVQKITLSSSRDIPFNKLVLSQSNVRRVKAGVSIEELAEDIARRTLLQSLNVRPVLD 79

Query: 61 DEGRETGMFEVP 72
           EG ETGMFE+P
Sbjct: 80 AEG-ETGMFEIP 90