BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0046.p (366 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_571524.1| methylthioribose-1-phosphate isomerase [Rhodops... 587 e-165 ref|YP_488291.1| methylthioribose-1-phosphate isomerase [Rhodops... 583 e-164 ref|YP_001236822.1| methylthioribose-1-phosphate isomerase [Brad... 569 e-160 ref|NP_950154.1| methylthioribose-1-phosphate isomerase [Rhodops... 566 e-159 ref|NP_767601.1| methylthioribose-1-phosphate isomerase [Bradyrh... 565 e-159 >ref|YP_571524.1| methylthioribose-1-phosphate isomerase [Rhodopseudomonas palustris BisB5] gb|ABE41623.1| translation initiation factor 2B subunit I family (IF-2BI) [Rhodopseudomonas palustris BisB5] Length = 374 Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust. Identities = 287/363 (79%), Positives = 316/363 (87%) Query: 1 MKVDGRHFRSIWLEPDGWSVGAIDQRRLPHEFIVAKLTTADEAGEPIRSMLVLGAPLIGA 60 MKVDG H RSIWLEPDGW+V AIDQRRLPHE++VA+LT D A + IR+MLV GAPLIGA Sbjct: 1 MKVDGIHTRSIWLEPDGWTVAAIDQRRLPHEYVVARLTNCDRAADAIRTMLVRGAPLIGA 60 Query: 61 AAAYGVALAMRADASDAALERAGRMLLATRPTAVNLKWAVDEMQRALAPLAASARAEPAY 120 AAYG+ALAMR DASDAAL A L+ATRPTA+NLKWA+DEM+RAL P+ + R AY Sbjct: 61 TAAYGIALAMREDASDAALGLAYDKLIATRPTAINLKWALDEMRRALVPVKPADRVAAAY 120 Query: 121 ARAREIADEDVEINREIGRHGLGLIETIAAIKKPGEVVNVLTHCNAGWLATVDWGTATSP 180 RA EIADEDV IN+ IG +GL LIE IAA KKPGE VNVLTHCNAGWLATVDWGTAT+P Sbjct: 121 KRASEIADEDVAINQAIGANGLKLIEAIAATKKPGERVNVLTHCNAGWLATVDWGTATAP 180 Query: 181 IYQAHDRGIPVHVWVDETRPRNQGASLTAWELGHHGVPHTVIPDNTGGHLMQHRMVDLAI 240 IYQA DRGI +HV+ DETRPRNQGASLTAWELGHHGV HTVIPDNTGGHLMQH MVDL I Sbjct: 181 IYQAFDRGIAIHVYADETRPRNQGASLTAWELGHHGVDHTVIPDNTGGHLMQHGMVDLCI 240 Query: 241 VGTDRVPANGDVCNKIGTYLKALAAHDNSVPFYVALPSPTIDFSIDDGVRQIPIEQRAAD 300 VGTDRV A+GDVCNKIGTYLKALAAHDN+VPFYVALPSPTIDF+I DGV++IPIEQR A Sbjct: 241 VGTDRVTADGDVCNKIGTYLKALAAHDNNVPFYVALPSPTIDFTIHDGVKEIPIEQREAA 300 Query: 301 EVTHLTGRAADGRIETVRVVPDGSSVANFGFDVTPARLVTGLITERGVLKPERAALANAF 360 EVT +TGR ADGRIETVR+VP GS VAN+GFDVTP+RLVTGLITERGVLKP+RA+LA AF Sbjct: 301 EVTDMTGRTADGRIETVRIVPKGSKVANYGFDVTPSRLVTGLITERGVLKPDRASLAAAF 360 Query: 361 PER 363 PER Sbjct: 361 PER 363 >ref|YP_488291.1| methylthioribose-1-phosphate isomerase [Rhodopseudomonas palustris HaA2] gb|ABD09380.1| translation initiation factor 2B subunit I family (IF-2BI) [Rhodopseudomonas palustris HaA2] Length = 374 Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust. Identities = 287/363 (79%), Positives = 315/363 (86%) Query: 1 MKVDGRHFRSIWLEPDGWSVGAIDQRRLPHEFIVAKLTTADEAGEPIRSMLVLGAPLIGA 60 MKVDG H RSIWLEPDGW+V AIDQRRLPHE++VA+LT D A + IR+MLV GAPLIGA Sbjct: 1 MKVDGIHTRSIWLEPDGWTVAAIDQRRLPHEYVVARLTNCDRAADAIRAMLVRGAPLIGA 60 Query: 61 AAAYGVALAMRADASDAALERAGRMLLATRPTAVNLKWAVDEMQRALAPLAASARAEPAY 120 AAYGVALAMR DASDAAL A L+ATRPTA+NLKWA+DEM+RALAP+ + R AY Sbjct: 61 TAAYGVALAMREDASDAALAIAYNKLIATRPTAINLKWALDEMRRALAPVKPADRVAAAY 120 Query: 121 ARAREIADEDVEINREIGRHGLGLIETIAAIKKPGEVVNVLTHCNAGWLATVDWGTATSP 180 RA EIADEDV IN+ IG HGL LIE IAA KKPGE VNVLTHCNAGWLATVDWGTAT+P Sbjct: 121 QRAAEIADEDVAINQAIGAHGLKLIEAIAARKKPGERVNVLTHCNAGWLATVDWGTATAP 180 Query: 181 IYQAHDRGIPVHVWVDETRPRNQGASLTAWELGHHGVPHTVIPDNTGGHLMQHRMVDLAI 240 IYQA D+GI +HV+ DETRPRNQGASLTAWELGHHGV HTVIPDNTGGHLMQH MVDL I Sbjct: 181 IYQAFDKGIAIHVYADETRPRNQGASLTAWELGHHGVDHTVIPDNTGGHLMQHGMVDLCI 240 Query: 241 VGTDRVPANGDVCNKIGTYLKALAAHDNSVPFYVALPSPTIDFSIDDGVRQIPIEQRAAD 300 VGTDRV A+GDVCNKIGTYLKALAA DN+VPFYVALPSPTIDF+I DGV++IPIEQR A Sbjct: 241 VGTDRVTADGDVCNKIGTYLKALAARDNNVPFYVALPSPTIDFTIHDGVKEIPIEQRDAA 300 Query: 301 EVTHLTGRAADGRIETVRVVPDGSSVANFGFDVTPARLVTGLITERGVLKPERAALANAF 360 EVT +TGR DGRIETVR+VP GS VAN+GFDVTP+RLVTGLITERGVLKP+RA+LA AF Sbjct: 301 EVTDMTGRTHDGRIETVRIVPQGSKVANYGFDVTPSRLVTGLITERGVLKPDRASLAAAF 360 Query: 361 PER 363 PER Sbjct: 361 PER 363 >ref|YP_001236822.1| methylthioribose-1-phosphate isomerase [Bradyrhizobium sp. BTAi1] gb|ABQ32916.1| methylthioribose-1-phosphate isomerase [Bradyrhizobium sp. BTAi1] Length = 367 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 285/365 (78%), Positives = 318/365 (87%), Gaps = 1/365 (0%) Query: 1 MKVDGRHFRSIWLEPDGWSVGAIDQRRLPHEFIVAKLTTADEAGEPIRSMLVLGAPLIGA 60 MKVDG+H+RSIWL+ DGWSV AIDQRRLPHEF++AK+TT +EA + IRSMLV GAPLIGA Sbjct: 1 MKVDGKHYRSIWLDADGWSVCAIDQRRLPHEFVLAKITTCEEAADAIRSMLVRGAPLIGA 60 Query: 61 AAAYGVALAMRADASDAALERAGRMLLATRPTAVNLKWAVDEMQRALAPLAASARAEPAY 120 AA+G+ALAMR D SD ++RA ML+ATRPTA+NLKWA+D M+ L LA S R + AY Sbjct: 61 TAAFGMALAMRDDRSDPGIDRAYEMLIATRPTAINLKWALDTMRTMLRRLAPSERRDAAY 120 Query: 121 ARAREIADEDVEINREIGRHGLGLIETIAAIKKPGEVVNVLTHCNAGWLATVDWGTATSP 180 ARA +IA EDV IN+ I +HGL LIE AA K PGEVVNVLTHCNAGWLATVDWGTAT+P Sbjct: 121 ARAVDIAGEDVTINQGIAKHGLALIEAAAARKTPGEVVNVLTHCNAGWLATVDWGTATAP 180 Query: 181 IYQAHDRGIPVHVWVDETRPRNQGASLTAWELGHHGVPHTVIPDNTGGHLMQHRMVDLAI 240 IY AHDRGIP+HVWVDETRPRNQGASLTAWELGHHGV HTVIPDNTGGHLMQH MVDLAI Sbjct: 181 IYLAHDRGIPIHVWVDETRPRNQGASLTAWELGHHGVAHTVIPDNTGGHLMQHGMVDLAI 240 Query: 241 VGTDRVPANGDVCNKIGTYLKALAAHDNSVPFYVALPSPTIDFSIDDGVRQIPIEQRAAD 300 VGTDRV ANGDVCNKIGTYLKALAA+DN VPFYVALPSPTIDF++ +G RQIPIEQR+A Sbjct: 241 VGTDRVAANGDVCNKIGTYLKALAAYDNGVPFYVALPSPTIDFAVGEG-RQIPIEQRSAQ 299 Query: 301 EVTHLTGRAADGRIETVRVVPDGSSVANFGFDVTPARLVTGLITERGVLKPERAALANAF 360 EVT +TGR ADGRIETVR+VP GS VAN+GFDVTPARLVTGLITERGVL+ + AALA AF Sbjct: 300 EVTEMTGRTADGRIETVRIVPPGSPVANYGFDVTPARLVTGLITERGVLQADGAALAAAF 359 Query: 361 PERST 365 PERS+ Sbjct: 360 PERSS 364 >ref|NP_950154.1| methylthioribose-1-phosphate isomerase [Rhodopseudomonas palustris CGA009] emb|CAE30260.1| translation initiation factor, aIF-2B alpha subunit [Rhodopseudomonas palustris CGA009] Length = 374 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 282/363 (77%), Positives = 314/363 (86%) Query: 1 MKVDGRHFRSIWLEPDGWSVGAIDQRRLPHEFIVAKLTTADEAGEPIRSMLVLGAPLIGA 60 MKVDG+H R+IWLE DGW+VG IDQRRLPH+++V KLT++D+A + IR+MLV GAPLIGA Sbjct: 1 MKVDGKHTRTIWLEADGWTVGTIDQRRLPHDYVVVKLTSSDDAADAIRTMLVRGAPLIGA 60 Query: 61 AAAYGVALAMRADASDAALERAGRMLLATRPTAVNLKWAVDEMQRALAPLAASARAEPAY 120 AAYG+ALAMR DASDA L+ A L+ATRPTA+NLKWA+DEM+RALAP+ + R AY Sbjct: 61 TAAYGMALAMREDASDAGLDAAYAKLVATRPTAINLKWALDEMRRALAPVQPADRVAAAY 120 Query: 121 ARAREIADEDVEINREIGRHGLGLIETIAAIKKPGEVVNVLTHCNAGWLATVDWGTATSP 180 RA EIADEDV IN+ IG GL LIE IAA KKPGE VNVLTHCNAGWLATVDWGTAT+P Sbjct: 121 RRAGEIADEDVAINQAIGASGLKLIEAIAATKKPGERVNVLTHCNAGWLATVDWGTATAP 180 Query: 181 IYQAHDRGIPVHVWVDETRPRNQGASLTAWELGHHGVPHTVIPDNTGGHLMQHRMVDLAI 240 IYQA D GIP+HV+ DETRPRNQGASLTAWELGHHGV HTVIPDNTGGHLMQH +VD+ I Sbjct: 181 IYQAFDAGIPIHVYADETRPRNQGASLTAWELGHHGVDHTVIPDNTGGHLMQHGLVDIVI 240 Query: 241 VGTDRVPANGDVCNKIGTYLKALAAHDNSVPFYVALPSPTIDFSIDDGVRQIPIEQRAAD 300 VGTDRV A+GDVCNKIGTYLKALAA DN VPFYVALPSPTIDF+I DGVR+IPIEQR A Sbjct: 241 VGTDRVTADGDVCNKIGTYLKALAAADNKVPFYVALPSPTIDFTIHDGVREIPIEQREAA 300 Query: 301 EVTHLTGRAADGRIETVRVVPDGSSVANFGFDVTPARLVTGLITERGVLKPERAALANAF 360 EVT +TGR DGRIETVR+VP GS VAN+GFDVTPARLVTGLITERGVLK +RAALA AF Sbjct: 301 EVTDMTGRTNDGRIETVRIVPQGSKVANYGFDVTPARLVTGLITERGVLKADRAALAAAF 360 Query: 361 PER 363 PER Sbjct: 361 PER 363 >ref|NP_767601.1| methylthioribose-1-phosphate isomerase [Bradyrhizobium japonicum USDA 110] dbj|BAC46226.1| blr0961 [Bradyrhizobium japonicum USDA 110] Length = 368 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 287/363 (79%), Positives = 316/363 (87%), Gaps = 1/363 (0%) Query: 1 MKVDGRHFRSIWLEPDGWSVGAIDQRRLPHEFIVAKLTTADEAGEPIRSMLVLGAPLIGA 60 MKVDG+HFRSIW E DGWSVGAIDQRRLPHEF+VA+LT+ ++A IR MLV GAPLIGA Sbjct: 1 MKVDGKHFRSIWRERDGWSVGAIDQRRLPHEFVVARLTSCEDAAVAIRDMLVRGAPLIGA 60 Query: 61 AAAYGVALAMRADASDAALERAGRMLLATRPTAVNLKWAVDEMQRALAPLAASARAEPAY 120 AAYG+ALAMR DASDA L+ A L+ RPTA+NLKWA+DEM+ LAP+ RAE AY Sbjct: 61 TAAYGMALAMREDASDAGLKLAYETLVVARPTAINLKWALDEMRATLAPIDPVERAEAAY 120 Query: 121 ARAREIADEDVEINREIGRHGLGLIETIAAIKKPGEVVNVLTHCNAGWLATVDWGTATSP 180 ARA EI ++DVEINR I +GL LIE IAA KKPGEVVNVLTHCNAGWLATVDWGTAT+P Sbjct: 121 ARADEIVEQDVEINRGIAANGLALIEAIAA-KKPGEVVNVLTHCNAGWLATVDWGTATAP 179 Query: 181 IYQAHDRGIPVHVWVDETRPRNQGASLTAWELGHHGVPHTVIPDNTGGHLMQHRMVDLAI 240 IY AH+RGI VHVWVDETRPRNQGASLTAWELGHHGVPHTVIPDNTGGHLMQH MVDLAI Sbjct: 180 IYLAHERGIKVHVWVDETRPRNQGASLTAWELGHHGVPHTVIPDNTGGHLMQHGMVDLAI 239 Query: 241 VGTDRVPANGDVCNKIGTYLKALAAHDNSVPFYVALPSPTIDFSIDDGVRQIPIEQRAAD 300 VGTDRV ANGDVCNKIGTYLKALAAHDN VPFYVALPSPTIDF++ DG+R IPIEQR+ Sbjct: 240 VGTDRVAANGDVCNKIGTYLKALAAHDNGVPFYVALPSPTIDFAVHDGIRDIPIEQRSGV 299 Query: 301 EVTHLTGRAADGRIETVRVVPDGSSVANFGFDVTPARLVTGLITERGVLKPERAALANAF 360 EVT +TGR ADGR+ETVR+VP+ S VAN+ FDVTPARLVTGLITERGVLKP+RA+LA AF Sbjct: 300 EVTDMTGRTADGRLETVRIVPENSPVANYAFDVTPARLVTGLITERGVLKPDRASLAAAF 359 Query: 361 PER 363 PER Sbjct: 360 PER 362