BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0045.p (180 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207175.1| hypothetical protein BRADO5274 [Bradyrhizobi... 291 2e-77 ref|YP_001241583.1| hypothetical protein BBta_5725 [Bradyrhizobi... 291 2e-77 ref|NP_772673.1| hypothetical protein bll6033 [Bradyrhizobium ja... 264 4e-69 ref|ZP_08630833.1| tricarboxylate transport protein [Bradyrhizob... 251 4e-65 ref|ZP_07026627.1| conserved hypothetical protein [Afipia sp. 1N... 221 4e-56 >ref|YP_001207175.1| hypothetical protein BRADO5274 [Bradyrhizobium sp. ORS 278] emb|CAL78958.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 180 Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 151/179 (84%), Positives = 165/179 (92%) Query: 1 MSNTELEIVVDDPTAPEDNSPAVVSTGVVDVVVSLLLLALAAVLGWDNWRTGASWDSTGP 60 MSN ELEI VDDPTAPE+NSPAV S VDV VSLLLLALA VL WDNWRTGASWDSTGP Sbjct: 1 MSNAELEIAVDDPTAPEENSPAVTSNRTVDVAVSLLLLALAVVLAWDNWRTGASWDSTGP 60 Query: 61 QPGYFPFYLSVILGGASLYGLGAAFLSRREAAETFVTRAQLRRVMAVFVPTLLFCLATQY 120 +PGYFPFYLSVILGGASLYG+GAAFLSR+EA ETFVTRAQLRRVMAVFVPTLLFC+A Q+ Sbjct: 61 EPGYFPFYLSVILGGASLYGIGAAFLSRKEAVETFVTRAQLRRVMAVFVPTLLFCIAMQF 120 Query: 121 LGLYVASFLLIAGFMRLVGKIALWKSLLTAFVFTAAMFITFDVAFDVIMPKGPLEAALG 179 LG+YVASFLLIAGFMR+VGKIA+WKSLLTAF+F+A MF+TFD+ FDV+MPKGPLEAA G Sbjct: 121 LGIYVASFLLIAGFMRIVGKIAIWKSLLTAFLFSAVMFVTFDIVFDVLMPKGPLEAAFG 179 >ref|YP_001241583.1| hypothetical protein BBta_5725 [Bradyrhizobium sp. BTAi1] gb|ABQ37677.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 180 Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 148/179 (82%), Positives = 165/179 (92%) Query: 1 MSNTELEIVVDDPTAPEDNSPAVVSTGVVDVVVSLLLLALAAVLGWDNWRTGASWDSTGP 60 MSN ELEI VDDPTAPE++SP+V S VDV VSLLLLALA VL WDNWRTGASWDSTGP Sbjct: 1 MSNAELEIAVDDPTAPEEDSPSVTSNRTVDVGVSLLLLALAVVLAWDNWRTGASWDSTGP 60 Query: 61 QPGYFPFYLSVILGGASLYGLGAAFLSRREAAETFVTRAQLRRVMAVFVPTLLFCLATQY 120 +PGYFPFYLSVILGGASLYG+GAAFLSR+EA ETFVTRAQLRRVMAVFVPTLLFC+A Q+ Sbjct: 61 EPGYFPFYLSVILGGASLYGIGAAFLSRKEAVETFVTRAQLRRVMAVFVPTLLFCIAMQF 120 Query: 121 LGLYVASFLLIAGFMRLVGKIALWKSLLTAFVFTAAMFITFDVAFDVIMPKGPLEAALG 179 LG+YVASFLLIAGFMR+VG+IA+WKSLLTAF+F+A MF+TFD+ FDV+MPKGPLEAA G Sbjct: 121 LGIYVASFLLIAGFMRIVGRIAIWKSLLTAFLFSAVMFVTFDIVFDVLMPKGPLEAAFG 179 >ref|NP_772673.1| hypothetical protein bll6033 [Bradyrhizobium japonicum USDA 110] dbj|BAC51298.1| bll6033 [Bradyrhizobium japonicum USDA 110] Length = 213 Score = 264 bits (675), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 143/180 (79%), Positives = 164/180 (91%) Query: 1 MSNTELEIVVDDPTAPEDNSPAVVSTGVVDVVVSLLLLALAAVLGWDNWRTGASWDSTGP 60 MS T++EIVVDDPTAPE++SP++VS+G ++++V LLLLALA LG+DNWRTGASWD+TGP Sbjct: 34 MSQTDIEIVVDDPTAPEEDSPSIVSSGTIEILVCLLLLALAITLGYDNWRTGASWDATGP 93 Query: 61 QPGYFPFYLSVILGGASLYGLGAAFLSRREAAETFVTRAQLRRVMAVFVPTLLFCLATQY 120 +PGYFPFYLSVILGG SLYGL AA ++RR AA +FVTRAQ RRVMAVFVPTLLFCL TQ+ Sbjct: 94 EPGYFPFYLSVILGGGSLYGLIAALVARRAAAGSFVTRAQARRVMAVFVPTLLFCLVTQF 153 Query: 121 LGLYVASFLLIAGFMRLVGKIALWKSLLTAFVFTAAMFITFDVAFDVIMPKGPLEAALGR 180 LGLYVASFLLIA FMRLVGKIALWKSLLTAF+FTA MF+TFD+AFDVIMPKGPLEAA G Sbjct: 154 LGLYVASFLLIAAFMRLVGKIALWKSLLTAFLFTAIMFVTFDIAFDVIMPKGPLEAAFGH 213 >ref|ZP_08630833.1| tricarboxylate transport protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06365.1| tricarboxylate transport protein [Bradyrhizobiaceae bacterium SG-6C] Length = 179 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 129/176 (73%), Positives = 151/176 (85%) Query: 5 ELEIVVDDPTAPEDNSPAVVSTGVVDVVVSLLLLALAAVLGWDNWRTGASWDSTGPQPGY 64 ++EIVVDDP AP++NSPAVV+ V++ V ++LLALAA+LGWDNWRTGASWD TGPQ GY Sbjct: 4 DIEIVVDDPNAPDENSPAVVNNRTVEMAVMVVLLALAALLGWDNWRTGASWDDTGPQAGY 63 Query: 65 FPFYLSVILGGASLYGLGAAFLSRREAAETFVTRAQLRRVMAVFVPTLLFCLATQYLGLY 124 FPFYLS+ILGGA+L+GL + + R E TFVTRAQL RV+ VFVPTLLFCLA Q+LGLY Sbjct: 64 FPFYLSIILGGAALFGLVSVAVKRSEGLCTFVTRAQLGRVLQVFVPTLLFCLAMQWLGLY 123 Query: 125 VASFLLIAGFMRLVGKIALWKSLLTAFVFTAAMFITFDVAFDVIMPKGPLEAALGR 180 VASFLL+AGFM + GKIA WKSLLTAF+F A MF+TFD+AFDVIMPKGPLEAA GR Sbjct: 124 VASFLLVAGFMGITGKIAWWKSLLTAFIFVAIMFVTFDIAFDVIMPKGPLEAAFGR 179 >ref|ZP_07026627.1| conserved hypothetical protein [Afipia sp. 1NLS2] gb|EFI51470.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length = 183 Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 110/182 (60%), Positives = 135/182 (74%), Gaps = 3/182 (1%) Query: 1 MSNTELEIVVDDPTAPEDNSPAVVSTGVVDVVVSLLLLALAAVLGWDNWRTGASWDSTGP 60 M+N E+EI V DPTAP +NSP++ T VD+ ++L A A V+ WDN+RTG W GP Sbjct: 1 MANNEIEIEVSDPTAPAENSPSLARTLTVDIWAMVVLGAFALVMAWDNYRTGMGWTEDGP 60 Query: 61 QPGYFPFYLSVILGGASLYGLGAAFLSRREA---AETFVTRAQLRRVMAVFVPTLLFCLA 117 +PGYFPFYLSVIL AS+YG+ + RR A AE FVTR Q +RV+ VFVPT+ FC+A Sbjct: 61 EPGYFPFYLSVILVLASVYGIVKSLYERRSAGGDAEVFVTRDQFKRVLLVFVPTVAFCVA 120 Query: 118 TQYLGLYVASFLLIAGFMRLVGKIALWKSLLTAFVFTAAMFITFDVAFDVIMPKGPLEAA 177 Q+LGLYVASFLL AGFM VGK+++WKSLLTA +F+ AMF F+V FDVIMPKGPLEA Sbjct: 121 MQWLGLYVASFLLTAGFMIFVGKLSVWKSLLTAAIFSVAMFYIFEVKFDVIMPKGPLEAL 180 Query: 178 LG 179 G Sbjct: 181 FG 182