BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0044.p (248 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772672.1| hypothetical protein bll6032 [Bradyrhizobium ja... 427 e-118 ref|YP_001241582.1| hypothetical protein BBta_5724 [Bradyrhizobi... 419 e-115 ref|YP_002289663.1| integral membrane protein [Oligotropha carbo... 400 e-109 ref|YP_001207174.1| putative TctA subunit of the tripartite tric... 399 e-109 ref|ZP_07026628.1| protein of unknown function DUF112 transmembr... 397 e-109 >ref|NP_772672.1| hypothetical protein bll6032 [Bradyrhizobium japonicum USDA 110] dbj|BAC51297.1| bll6032 [Bradyrhizobium japonicum USDA 110] Length = 505 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 219/227 (96%), Positives = 225/227 (99%) Query: 1 MEAFGLLLHGFAVLLTWKTLLLMMVGLVLGIFVGVLPGLGGPNGVAILLPLTFTMDPTSA 60 MEA GLLLHGFAVLLTWKTL+LMMVGLVLGIFVGVLPGLGGPNGVAILLPLTFTMDPTSA Sbjct: 1 MEALGLLLHGFAVLLTWKTLVLMMVGLVLGIFVGVLPGLGGPNGVAILLPLTFTMDPTSA 60 Query: 61 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPVAQQGRAAEALTAAFTSSFVG 120 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYP+AQQGRAAEALTAAFTSSF+G Sbjct: 61 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPMAQQGRAAEALTAAFTSSFIG 120 Query: 121 SLVAVLLITFLAPMISSFALRFGPPEFFAVYLLTFCSFVGLGREAKHKTVISMSLGLLLA 180 SLVAVLLITFLAPMISSFAL+FGPPEFFAVYLLTFCSFVGLGREAKHKTVISMSLGLLLA Sbjct: 121 SLVAVLLITFLAPMISSFALKFGPPEFFAVYLLTFCSFVGLGREAKHKTVISMSLGLLLA 180 Query: 181 GVGMDTVSGQLRMTFGSAELLRGINFLVAVIGLFGISEILLTMEERL 227 G+GMDTVSG LRMTFGSA+LLRGINFLVAVIGLFGISEILLTMEERL Sbjct: 181 GIGMDTVSGNLRMTFGSADLLRGINFLVAVIGLFGISEILLTMEERL 227 >ref|YP_001241582.1| hypothetical protein BBta_5724 [Bradyrhizobium sp. BTAi1] gb|ABQ37676.1| putative membrane protein of unknown function withTctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family domain [Bradyrhizobium sp. BTAi1] Length = 506 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 213/227 (93%), Positives = 222/227 (97%) Query: 1 MEAFGLLLHGFAVLLTWKTLLLMMVGLVLGIFVGVLPGLGGPNGVAILLPLTFTMDPTSA 60 MEA GLLLHGFAVLLTWKTL LMMVGLVLG+FVGVLPGLGGPNGVAILLPLTF+MDPTSA Sbjct: 1 MEALGLLLHGFAVLLTWKTLALMMVGLVLGVFVGVLPGLGGPNGVAILLPLTFSMDPTSA 60 Query: 61 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPVAQQGRAAEALTAAFTSSFVG 120 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYP+AQQG+AAEALTAAFTSSF+G Sbjct: 61 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPMAQQGKAAEALTAAFTSSFIG 120 Query: 121 SLVAVLLITFLAPMISSFALRFGPPEFFAVYLLTFCSFVGLGREAKHKTVISMSLGLLLA 180 SLVAVLLITFLAP ISSFAL+FGPPEFFAVYLLTFCSFVGLGRE KHKTVI+M+LGLLLA Sbjct: 121 SLVAVLLITFLAPWISSFALKFGPPEFFAVYLLTFCSFVGLGREDKHKTVIAMALGLLLA 180 Query: 181 GVGMDTVSGQLRMTFGSAELLRGINFLVAVIGLFGISEILLTMEERL 227 GVGMDTVSGQLRMTFGS +LLRGINFLVAVIGLFGISEILLTMEERL Sbjct: 181 GVGMDTVSGQLRMTFGSTDLLRGINFLVAVIGLFGISEILLTMEERL 227 >ref|YP_002289663.1| integral membrane protein [Oligotropha carboxidovorans OM5] ref|YP_004632338.1| hypothetical protein OCA5_c13810 [Oligotropha carboxidovorans OM5] gb|ACI93798.1| integral membrane protein [Oligotropha carboxidovorans OM5] gb|AEI02521.1| putative transmembrane protein [Oligotropha carboxidovorans OM4] gb|AEI06097.1| putative transmembrane protein [Oligotropha carboxidovorans OM5] Length = 503 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 203/239 (84%), Positives = 219/239 (91%) Query: 1 MEAFGLLLHGFAVLLTWKTLLLMMVGLVLGIFVGVLPGLGGPNGVAILLPLTFTMDPTSA 60 MEAF LLLHGF+VLLTWK + LM VGL+LG+FVGVLPGLGGPNGVAILLP+TF+MDPTSA Sbjct: 1 MEAFSLLLHGFSVLLTWKIIGLMFVGLILGVFVGVLPGLGGPNGVAILLPITFSMDPTSA 60 Query: 61 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPVAQQGRAAEALTAAFTSSFVG 120 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYP+AQQGRA EALTAAFTSSF+G Sbjct: 61 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPMAQQGRAGEALTAAFTSSFIG 120 Query: 121 SLVAVLLITFLAPMISSFALRFGPPEFFAVYLLTFCSFVGLGREAKHKTVISMSLGLLLA 180 S VAVLLITF+AP I+SFALRFGPPEFFAVYLLTFCSFVGLGRE KHKT+ISM+LGLLL Sbjct: 121 SFVAVLLITFVAPGIASFALRFGPPEFFAVYLLTFCSFVGLGREDKHKTIISMALGLLLT 180 Query: 181 GVGMDTVSGQLRMTFGSAELLRGINFLVAVIGLFGISEILLTMEERLXPPASACASFSR 239 G+GMDTVSG LRMTFGS +LLRG+NFLVAVIGLFGISEILLTMEE+L A A R Sbjct: 181 GIGMDTVSGTLRMTFGSTDLLRGVNFLVAVIGLFGISEILLTMEEQLALKGHAAAISPR 239 >ref|YP_001207174.1| putative TctA subunit of the tripartite tricarboxylate transport(TTT) family [Bradyrhizobium sp. ORS 278] emb|CAL78957.1| conserved hypothetical protein; putative membrane protein; putative TctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family [Bradyrhizobium sp. ORS 278] Length = 506 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 215/227 (94%), Positives = 223/227 (98%) Query: 1 MEAFGLLLHGFAVLLTWKTLLLMMVGLVLGIFVGVLPGLGGPNGVAILLPLTFTMDPTSA 60 MEA GLLLHGFAVLLTWKTLLLMMVGLVLG+FVGVLPGLGGPNGVAILLPLTF+MDPTSA Sbjct: 1 MEALGLLLHGFAVLLTWKTLLLMMVGLVLGVFVGVLPGLGGPNGVAILLPLTFSMDPTSA 60 Query: 61 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPVAQQGRAAEALTAAFTSSFVG 120 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYP+AQQG+AAEALTAAFTSSF+G Sbjct: 61 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPMAQQGKAAEALTAAFTSSFIG 120 Query: 121 SLVAVLLITFLAPMISSFALRFGPPEFFAVYLLTFCSFVGLGREAKHKTVISMSLGLLLA 180 SLVAVLLITFLAP ISSFAL+FGPPEFFAVYLLTFCSFVGLGRE KHKTVI+MSLGLLLA Sbjct: 121 SLVAVLLITFLAPWISSFALKFGPPEFFAVYLLTFCSFVGLGREDKHKTVIAMSLGLLLA 180 Query: 181 GVGMDTVSGQLRMTFGSAELLRGINFLVAVIGLFGISEILLTMEERL 227 GVGMDTVSGQLRMTFGS +LLRGINFLVAVIGLFGISEILLTMEERL Sbjct: 181 GVGMDTVSGQLRMTFGSTDLLRGINFLVAVIGLFGISEILLTMEERL 227 >ref|ZP_07026628.1| protein of unknown function DUF112 transmembrane [Afipia sp. 1NLS2] gb|EFI51471.1| protein of unknown function DUF112 transmembrane [Afipia sp. 1NLS2] Length = 503 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 201/235 (85%), Positives = 218/235 (92%) Query: 1 MEAFGLLLHGFAVLLTWKTLLLMMVGLVLGIFVGVLPGLGGPNGVAILLPLTFTMDPTSA 60 MEAF LLLHGF+VLLTWK L LM VGL+LG+FVGVLPGLGGPNGVAILLP+TF+MDPTSA Sbjct: 1 MEAFSLLLHGFSVLLTWKILGLMFVGLILGVFVGVLPGLGGPNGVAILLPITFSMDPTSA 60 Query: 61 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPVAQQGRAAEALTAAFTSSFVG 120 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYP+AQQG+AAEALTAAFTSSF+G Sbjct: 61 IVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPMAQQGKAAEALTAAFTSSFIG 120 Query: 121 SLVAVLLITFLAPMISSFALRFGPPEFFAVYLLTFCSFVGLGREAKHKTVISMSLGLLLA 180 S VAVLLITF+AP I+SFALRFGP EFF+VYLLTFCSFVGLGRE KHKT+ISM+LGLLL Sbjct: 121 SFVAVLLITFVAPGIASFALRFGPAEFFSVYLLTFCSFVGLGREDKHKTIISMALGLLLT 180 Query: 181 GVGMDTVSGQLRMTFGSAELLRGINFLVAVIGLFGISEILLTMEERLXPPASACA 235 G+GMDTVSG LRMTFGS +LLRG+NFLVAVIGLFGISEILLTMEE+L A A Sbjct: 181 GIGMDTVSGTLRMTFGSTDLLRGVNFLVAVIGLFGISEILLTMEEQLALKGHAAA 235