BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0043.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772672.1| hypothetical protein bll6032 [Bradyrhizobium ja... 462 e-128 ref|YP_001207174.1| putative TctA subunit of the tripartite tric... 444 e-123 ref|YP_001241582.1| hypothetical protein BBta_5724 [Bradyrhizobi... 443 e-122 ref|ZP_08630832.1| tricarboxylate transport membrane protein [Br... 441 e-122 ref|YP_002289663.1| integral membrane protein [Oligotropha carbo... 405 e-111 >ref|NP_772672.1| hypothetical protein bll6032 [Bradyrhizobium japonicum USDA 110] dbj|BAC51297.1| bll6032 [Bradyrhizobium japonicum USDA 110] Length = 505 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 233/252 (92%), Positives = 243/252 (96%) Query: 1 VTLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFATDQDSFGKGRIEGVFAPETAAHASG 60 VTLLRSS IGCWLGITPGGAIAASFMGYNLAKRF+ D +SFGKGRIEGVFAPETAAHASG Sbjct: 253 VTLLRSSFIGCWLGITPGGAIAASFMGYNLAKRFSKDPESFGKGRIEGVFAPETAAHASG 312 Query: 61 TSALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLV 120 T+ALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLV Sbjct: 313 TAALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLV 372 Query: 121 LVLTTVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFDIWLMLGFGVVGYVFKKIGI 180 LVLTTVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFDIWLMLGFGVVGYVFKKIGI Sbjct: 373 LVLTTVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFDIWLMLGFGVVGYVFKKIGI 432 Query: 181 PLAPFTLALVLGNRAEDAFRLSMIGSGGDMKVFWSNGLVGSITTLAIVLLFWPLIDGLVG 240 PLAPFTLALVLGNRAEDAFRLSMIG+GGD+KVFWSNGLVGSITTLAIVLLFWP++DGL+ Sbjct: 433 PLAPFTLALVLGNRAEDAFRLSMIGAGGDLKVFWSNGLVGSITTLAIVLLFWPVLDGLLA 492 Query: 241 RVSWRQRSKTET 252 RV QR+K + Sbjct: 493 RVGLTQRTKATS 504 >ref|YP_001207174.1| putative TctA subunit of the tripartite tricarboxylate transport(TTT) family [Bradyrhizobium sp. ORS 278] emb|CAL78957.1| conserved hypothetical protein; putative membrane protein; putative TctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family [Bradyrhizobium sp. ORS 278] Length = 506 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 226/239 (94%), Positives = 234/239 (97%) Query: 1 VTLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFATDQDSFGKGRIEGVFAPETAAHASG 60 +TLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFA DQDSFGKGRIEGVFAPETAAHASG Sbjct: 253 MTLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFAKDQDSFGKGRIEGVFAPETAAHASG 312 Query: 61 TSALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLV 120 T+ALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLV Sbjct: 313 TAALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLV 372 Query: 121 LVLTTVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFDIWLMLGFGVVGYVFKKIGI 180 LVL+TVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFD+WLMLGFGVVGYVFKKI I Sbjct: 373 LVLSTVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFDVWLMLGFGVVGYVFKKIKI 432 Query: 181 PLAPFTLALVLGNRAEDAFRLSMIGSGGDMKVFWSNGLVGSITTLAIVLLFWPLIDGLV 239 PLAPFTLALVLG+RAEDAFR SMI SGG+MKVFW+NGLVG+ITTLAIVLLFWPLID LV Sbjct: 433 PLAPFTLALVLGSRAEDAFRQSMIISGGNMKVFWANGLVGTITTLAIVLLFWPLIDRLV 491 >ref|YP_001241582.1| hypothetical protein BBta_5724 [Bradyrhizobium sp. BTAi1] gb|ABQ37676.1| putative membrane protein of unknown function withTctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family domain [Bradyrhizobium sp. BTAi1] Length = 506 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 225/243 (92%), Positives = 235/243 (96%) Query: 1 VTLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFATDQDSFGKGRIEGVFAPETAAHASG 60 +TLLRSSVIGCWLGITPGGAIAASFMGYNLAKRF+ D DSFGKGRIEGVFAPETAAHASG Sbjct: 253 MTLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFSKDPDSFGKGRIEGVFAPETAAHASG 312 Query: 61 TSALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLV 120 T+ALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLV Sbjct: 313 TAALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLV 372 Query: 121 LVLTTVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFDIWLMLGFGVVGYVFKKIGI 180 LVL+TVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFD+WLMLGFGVVGYVFKKI I Sbjct: 373 LVLSTVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFDVWLMLGFGVVGYVFKKIKI 432 Query: 181 PLAPFTLALVLGNRAEDAFRLSMIGSGGDMKVFWSNGLVGSITTLAIVLLFWPLIDGLVG 240 PLAPFTLALVLG+RAEDAFR SMI SGG+MKVFW+NGLVG+ITTLAI+LLFWPLID LV Sbjct: 433 PLAPFTLALVLGSRAEDAFRQSMIISGGNMKVFWANGLVGTITTLAILLLFWPLIDRLVA 492 Query: 241 RVS 243 VS Sbjct: 493 SVS 495 >ref|ZP_08630832.1| tricarboxylate transport membrane protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06364.1| tricarboxylate transport membrane protein [Bradyrhizobiaceae bacterium SG-6C] Length = 504 Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust. Identities = 225/252 (89%), Positives = 238/252 (94%), Gaps = 4/252 (1%) Query: 2 TLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFATDQDSFGKGRIEGVFAPETAAHASGT 61 TL+RSSVIGCWLGITPGGAIAASFMGYNLAKRF+ D++SFGKGRIEGVFAPETAAHASGT Sbjct: 254 TLIRSSVIGCWLGITPGGAIAASFMGYNLAKRFSKDKESFGKGRIEGVFAPETAAHASGT 313 Query: 62 SALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLVL 121 +ALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLVL Sbjct: 314 AALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLVL 373 Query: 122 VLTTVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFDIWLMLGFGVVGYVFKKIGIP 181 VLTTVPIFASILRVPFAA+APMIVVSCAIGAYAIQNAMFDIWLML FGVVGYVFKKIGIP Sbjct: 374 VLTTVPIFASILRVPFAAIAPMIVVSCAIGAYAIQNAMFDIWLMLLFGVVGYVFKKIGIP 433 Query: 182 LAPFTLALVLGNRAEDAFRLSMIGSGGDMKVFWSNGLVGSITTLAIVLLFWPLIDGLVGR 241 LAPFTLALVLG+RAEDAFRL+MIGSGG +KVFWSNGLVG+ITTLAIVLLFWP+ID R Sbjct: 434 LAPFTLALVLGSRAEDAFRLAMIGSGGSVKVFWSNGLVGTITTLAIVLLFWPVID----R 489 Query: 242 VSWRQRSKTETP 253 + K E+P Sbjct: 490 IFASFGGKKESP 501 >ref|YP_002289663.1| integral membrane protein [Oligotropha carboxidovorans OM5] ref|YP_004632338.1| hypothetical protein OCA5_c13810 [Oligotropha carboxidovorans OM5] gb|ACI93798.1| integral membrane protein [Oligotropha carboxidovorans OM5] gb|AEI02521.1| putative transmembrane protein [Oligotropha carboxidovorans OM4] gb|AEI06097.1| putative transmembrane protein [Oligotropha carboxidovorans OM5] Length = 503 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 203/242 (83%), Positives = 223/242 (92%) Query: 1 VTLLRSSVIGCWLGITPGGAIAASFMGYNLAKRFATDQDSFGKGRIEGVFAPETAAHASG 60 VTL+RSS IGCWLGITPGGAIAASFMGYNLAKRF+ D + FGKG++EGVFAPETAAHASG Sbjct: 253 VTLVRSSAIGCWLGITPGGAIAASFMGYNLAKRFSKDPEEFGKGKVEGVFAPETAAHASG 312 Query: 61 TSALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLV 120 TSALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGL+ Sbjct: 313 TSALLPMLALGIPGSGTAAILLGGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLL 372 Query: 121 LVLTTVPIFASILRVPFAAVAPMIVVSCAIGAYAIQNAMFDIWLMLGFGVVGYVFKKIGI 180 +VL TVP+FAS+LRVPFAA+APMIVVSCAIGA+AIQNAMFDIWLML FGV+GYVFKKIGI Sbjct: 373 IVLATVPLFASVLRVPFAAIAPMIVVSCAIGAFAIQNAMFDIWLMLVFGVIGYVFKKIGI 432 Query: 181 PLAPFTLALVLGNRAEDAFRLSMIGSGGDMKVFWSNGLVGSITTLAIVLLFWPLIDGLVG 240 PLAP TLALVLG+RAED+FRLSMI GG + VFWSN LVGSITTL+ VLLF I+ + Sbjct: 433 PLAPLTLALVLGSRAEDSFRLSMISGGGSLGVFWSNWLVGSITTLSFVLLFLTPIEKAIS 492 Query: 241 RV 242 ++ Sbjct: 493 KI 494