BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0025.p (355 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_576366.1| dTDP-glucose 4,6-dehydratase [Nitrobacter hambu... 649 0.0 ref|YP_001208830.1| dTDP-D-glucose 4,6-dehydratase [Bradyrhizobi... 633 e-179 ref|YP_317163.1| dTDP-glucose 4,6-dehydratase [Nitrobacter winog... 629 e-178 ref|ZP_01044604.1| dTDP-glucose 4,6-dehydratase [Nitrobacter sp.... 627 e-177 ref|YP_003453483.1| dTDP-glucose 4,6-dehydratase [Azospirillum s... 509 e-142 >ref|YP_576366.1| dTDP-glucose 4,6-dehydratase [Nitrobacter hamburgensis X14] gb|ABE61906.1| dTDP-glucose 4,6-dehydratase [Nitrobacter hamburgensis X14] Length = 355 Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/355 (87%), Positives = 326/355 (91%) Query: 1 MRFKGSTIFVTGGAGFIGSAVVRHLLRDTHARVVNIDKLTYAANLASLPRAAESLNYTFE 60 MRFK STIFVTGGAGFIGSAV+RHLL +THARVVNIDK TYAANL SLP E+LNY FE Sbjct: 1 MRFKASTIFVTGGAGFIGSAVIRHLLHNTHARVVNIDKCTYAANLDSLPGTNENLNYAFE 60 Query: 61 KACICEAQNLRRLFEKYQPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTILQETLRHW 120 K CIC+ LR LFE+Y+PDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFT+LQETLRHW Sbjct: 61 KQCICDGTGLRHLFERYRPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTLLQETLRHW 120 Query: 121 RTLSPEKRDRFRFLHISTDEVFGSLGDEGLFTETTAYAPNSPYSASKASSDHLVRAWRET 180 RTLSPEKR FRFLH+STDEVFGSLGD+G FTETTAYAPNSPYSASKASSDHLVRAWRET Sbjct: 121 RTLSPEKRKTFRFLHVSTDEVFGSLGDDGFFTETTAYAPNSPYSASKASSDHLVRAWRET 180 Query: 181 YELPTLVTNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWLFVEDHAKALT 240 YELPTLVTNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWL+VEDHAKALT Sbjct: 181 YELPTLVTNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWLYVEDHAKALT 240 Query: 241 LVLERGEVGETYNVGGRNERTNLHVVESICDLLDEVVPAAAGPRRQLINFVADRPGHDRR 300 LVLE G VGETYNVGGRNERTNLHVVESIC+LLDEV P A G RR+LI FVADRPGHDRR Sbjct: 241 LVLEHGLVGETYNVGGRNERTNLHVVESICNLLDEVAPGARGARRELITFVADRPGHDRR 300 Query: 301 YAIDATKLETELGWRAEENFETGIAKTVRWYVDEQPWWRSILEGGYKVERVGLNQ 355 YAIDA+KLE ELGWRAEENFE+GI KTVRWYVDEQPWWR+IL GY +RVGL+Q Sbjct: 301 YAIDASKLERELGWRAEENFESGIEKTVRWYVDEQPWWRAILARGYAAKRVGLSQ 355 >ref|YP_001208830.1| dTDP-D-glucose 4,6-dehydratase [Bradyrhizobium sp. ORS 278] emb|CAL80615.1| dTDP-D-glucose 4,6-dehydratase [Bradyrhizobium sp. ORS 278] Length = 357 Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust. Identities = 301/352 (85%), Positives = 325/352 (92%) Query: 1 MRFKGSTIFVTGGAGFIGSAVVRHLLRDTHARVVNIDKLTYAANLASLPRAAESLNYTFE 60 MRFKGSTIFVTGGAGFIGSAVVRHLLRDTHARVVNIDKLTYAANL SLP AA + +Y FE Sbjct: 1 MRFKGSTIFVTGGAGFIGSAVVRHLLRDTHARVVNIDKLTYAANLDSLPGAAGNPHYAFE 60 Query: 61 KACICEAQNLRRLFEKYQPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTILQETLRHW 120 +A IC+A LR+LF+KYQPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFT+LQE LRH+ Sbjct: 61 QADICDAAALRKLFDKYQPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTLLQEALRHF 120 Query: 121 RTLSPEKRDRFRFLHISTDEVFGSLGDEGLFTETTAYAPNSPYSASKASSDHLVRAWRET 180 R+LSPEKR FRFLHISTDEVFG+LGD GLFTETTAYAPNSPYSASKASSDHLVRAWRET Sbjct: 121 RSLSPEKRAGFRFLHISTDEVFGTLGDTGLFTETTAYAPNSPYSASKASSDHLVRAWRET 180 Query: 181 YELPTLVTNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWLFVEDHAKALT 240 YELPT++TNCSNNYGPYHFPEKLIPHMIIKGL E LPVYGDG+NIRDWLFVEDHA+ALT Sbjct: 181 YELPTMITNCSNNYGPYHFPEKLIPHMIIKGLGFETLPVYGDGQNIRDWLFVEDHARALT 240 Query: 241 LVLERGEVGETYNVGGRNERTNLHVVESICDLLDEVVPAAAGPRRQLINFVADRPGHDRR 300 LVLERG+VGETYNVGGRNERTNLHVVE+ICDLLD V P G RRQLI+FV DRPGHDRR Sbjct: 241 LVLERGQVGETYNVGGRNERTNLHVVETICDLLDAVAPGPQGGRRQLISFVTDRPGHDRR 300 Query: 301 YAIDATKLETELGWRAEENFETGIAKTVRWYVDEQPWWRSILEGGYKVERVG 352 YAIDA+KLE ELGWRAEE FETGIAKTVRWYV E+PWW++IL+ GY+ ER+G Sbjct: 301 YAIDASKLERELGWRAEETFETGIAKTVRWYVQEKPWWQAILQRGYQTERLG 352 >ref|YP_317163.1| dTDP-glucose 4,6-dehydratase [Nitrobacter winogradskyi Nb-255] gb|ABA03811.1| dTDP-glucose 4,6-dehydratase [Nitrobacter winogradskyi Nb-255] Length = 355 Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust. Identities = 296/355 (83%), Positives = 318/355 (89%) Query: 1 MRFKGSTIFVTGGAGFIGSAVVRHLLRDTHARVVNIDKLTYAANLASLPRAAESLNYTFE 60 MRFK STIFVTGGAGFIGSAVVRHLL DTHARVVNIDK TYAANL SLP E+LNY FE Sbjct: 1 MRFKASTIFVTGGAGFIGSAVVRHLLHDTHARVVNIDKCTYAANLDSLPGTNENLNYAFE 60 Query: 61 KACICEAQNLRRLFEKYQPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTILQETLRHW 120 K CIC++ LR LFEKY+PDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFT+LQETLRHW Sbjct: 61 KQCICDSAGLRHLFEKYRPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTLLQETLRHW 120 Query: 121 RTLSPEKRDRFRFLHISTDEVFGSLGDEGLFTETTAYAPNSPYSASKASSDHLVRAWRET 180 R+LSPEKR++FRFLH+STDEVFGSLGD G FTE TAYAPNSPYSASKASSDHLVRAWRET Sbjct: 121 RSLSPEKREKFRFLHVSTDEVFGSLGDSGYFTEATAYAPNSPYSASKASSDHLVRAWRET 180 Query: 181 YELPTLVTNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWLFVEDHAKALT 240 YELPTL+TNCSNNYGPYHFPEKLIPHMIIKGLA EPLPVYGDG+NIRDWL+V+DHA+AL+ Sbjct: 181 YELPTLITNCSNNYGPYHFPEKLIPHMIIKGLACEPLPVYGDGRNIRDWLYVDDHARALS 240 Query: 241 LVLERGEVGETYNVGGRNERTNLHVVESICDLLDEVVPAAAGPRRQLINFVADRPGHDRR 300 LVLE G VG TYNVGGRNERTNLHVVESICDLLDE+ P R LI FV DRPGHDRR Sbjct: 241 LVLEHGAVGHTYNVGGRNERTNLHVVESICDLLDEIAPNTTNRHRDLITFVTDRPGHDRR 300 Query: 301 YAIDATKLETELGWRAEENFETGIAKTVRWYVDEQPWWRSILEGGYKVERVGLNQ 355 YAIDA+KLE ELGWRA+E+FE+GI KTVRWYVDEQPWW++IL GY RVGL Q Sbjct: 301 YAIDASKLERELGWRAKEDFESGIEKTVRWYVDEQPWWQAILARGYAARRVGLRQ 355 >ref|ZP_01044604.1| dTDP-glucose 4,6-dehydratase [Nitrobacter sp. Nb-311A] gb|EAQ37385.1| dTDP-glucose 4,6-dehydratase [Nitrobacter sp. Nb-311A] Length = 354 Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust. Identities = 300/355 (84%), Positives = 319/355 (89%), Gaps = 1/355 (0%) Query: 1 MRFKGSTIFVTGGAGFIGSAVVRHLLRDTHARVVNIDKLTYAANLASLPRAAESLNYTFE 60 MRFK STIFVTGGAGFIGSAVVRHLL THARVVNIDK TYAANL SLP E+LNY FE Sbjct: 1 MRFKASTIFVTGGAGFIGSAVVRHLLTHTHARVVNIDKCTYAANLDSLPGTNENLNYAFE 60 Query: 61 KACICEAQNLRRLFEKYQPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTILQETLRHW 120 K CIC+ LR LFEKY+PDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFT+LQE+LRHW Sbjct: 61 KQCICDGVGLRHLFEKYRPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTLLQESLRHW 120 Query: 121 RTLSPEKRDRFRFLHISTDEVFGSLGDEGLFTETTAYAPNSPYSASKASSDHLVRAWRET 180 R+LS EKR +FRFLH+STDEVFGSLGD+G FTETTAYAPNSPYSASKASSDHLVRAWRET Sbjct: 121 RSLSHEKRRKFRFLHVSTDEVFGSLGDDGFFTETTAYAPNSPYSASKASSDHLVRAWRET 180 Query: 181 YELPTLVTNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWLFVEDHAKALT 240 YELPTLVTNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWL+V+DHA+AL+ Sbjct: 181 YELPTLVTNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWLYVDDHARALS 240 Query: 241 LVLERGEVGETYNVGGRNERTNLHVVESICDLLDEVVPAAAGPRRQLINFVADRPGHDRR 300 L LE G VGETYNVGGRNERTNLHVVESICDLLDE+ P A R LI FVADRPGHDRR Sbjct: 241 LTLEHGAVGETYNVGGRNERTNLHVVESICDLLDEIAPGAT-RHRNLITFVADRPGHDRR 299 Query: 301 YAIDATKLETELGWRAEENFETGIAKTVRWYVDEQPWWRSILEGGYKVERVGLNQ 355 YAIDA+KLE ELGW AEENFE+GI KTVRWYV+EQPWWR+IL GY +RVGL Q Sbjct: 300 YAIDASKLERELGWVAEENFESGIEKTVRWYVEEQPWWRAILARGYAAKRVGLRQ 354 >ref|YP_003453483.1| dTDP-glucose 4,6-dehydratase [Azospirillum sp. B510] dbj|BAI76939.1| dTDP-glucose 4,6-dehydratase [Azospirillum sp. B510] Length = 355 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 242/348 (69%), Positives = 288/348 (82%), Gaps = 1/348 (0%) Query: 8 IFVTGGAGFIGSAVVRHLLRDTHARVVNIDKLTYAANLASLPRAAESLNYTFEKACICEA 67 I VTGGAGFIGSAVVR LL +T A VVN+DKLTYAANL+SLP AA + Y FE+ IC+A Sbjct: 4 ILVTGGAGFIGSAVVRQLLAETDAFVVNVDKLTYAANLSSLPGAAGNPRYAFEQVDICDA 63 Query: 68 QNLRRLFEKYQPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTILQETLRHWRTLSPEK 127 LRR+F+ +QPDAVM+LAAESHVDRSIDGPGEFIQTN+VGTF +L+ +W L E+ Sbjct: 64 AELRRVFDTHQPDAVMHLAAESHVDRSIDGPGEFIQTNVVGTFRLLEAVRGYWSALPVER 123 Query: 128 RDRFRFLHISTDEVFGSLGDEGLFTETTAYAPNSPYSASKASSDHLVRAWRETYELPTLV 187 ++RFRF HISTDEVFG+LGD+G FTETTAY+PNSPYSASKASSDHLVRAW ETY LP ++ Sbjct: 124 KERFRFHHISTDEVFGTLGDDGFFTETTAYSPNSPYSASKASSDHLVRAWHETYGLPVVL 183 Query: 188 TNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWLFVEDHAKALTLVLERGE 247 TNCSNNYGPYHFPEKLIP MI+KGLAGE LPVYG G NIRDWL+VEDHA+AL LVLE+G Sbjct: 184 TNCSNNYGPYHFPEKLIPLMILKGLAGEKLPVYGKGDNIRDWLYVEDHARALRLVLEKGR 243 Query: 248 VGETYNVGGRNERTNLHVVESICDLLDEVVPAAAGPRRQLINFVADRPGHDRRYAIDATK 307 +GE+YN+GG NERTNL VV +IC LD++ PA A P +LI+FV DRPGHD+RYAIDA K Sbjct: 244 IGESYNIGGHNERTNLEVVRAICAHLDDMDPAGA-PHDRLISFVTDRPGHDKRYAIDAGK 302 Query: 308 LETELGWRAEENFETGIAKTVRWYVDEQPWWRSILEGGYKVERVGLNQ 355 +E ELGW E FE+G+ KTV WY++ + WW++IL G Y+ ER+GL + Sbjct: 303 IERELGWTPLETFESGLRKTVAWYLENRDWWQAILNGSYRGERLGLKE 350