BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0023.p (184 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_317165.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [N... 333 7e-90 ref|YP_576368.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrobact... 333 9e-90 ref|ZP_01044602.1| dTDP-4-dehydrorhamnose 3,5-epimerase related ... 327 3e-88 ref|YP_001208828.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Bradyrhi... 327 7e-88 ref|YP_002514409.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thioal... 242 2e-62 >ref|YP_317165.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Nitrobacter winogradskyi Nb-255] gb|ABA03813.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrobacter winogradskyi Nb-255] Length = 198 Score = 333 bits (854), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 156/184 (84%), Positives = 168/184 (91%) Query: 1 MNVIKTELPEVLIVEPKLFGDQRGFFLETYQSPRYVEHGITRPFVQDNMSRSAYGVLRGL 60 MNVI+TE+PEV+I EP+LFGDQRGFFLETYQ PRY EHG+TRPFVQDN+SRSA GVLRGL Sbjct: 15 MNVIQTEVPEVVIFEPRLFGDQRGFFLETYQFPRYAEHGVTRPFVQDNLSRSARGVLRGL 74 Query: 61 HLQNPLTQGKLVTVLRGKVLDVAVDVRVGSPNFGKHVAVELSEDNRRQLWVPRGFAHGFV 120 HLQNP QGKLVTVLRGKVLDVAVDVR GSPNFG+HVAVELSE+NRRQLWVPRGFAHGFV Sbjct: 75 HLQNPSPQGKLVTVLRGKVLDVAVDVRAGSPNFGRHVAVELSEENRRQLWVPRGFAHGFV 134 Query: 121 VLSETADFFYKCDDFYSPKDELSIRWNDPAIGIKWGVDKPQLSAKDADAPLLADASNLPT 180 VLSETADFFYKCDD YSPK+ELSIRWNDP IGI WGV+ P LSAKDADAPLLAD N P Sbjct: 135 VLSETADFFYKCDDLYSPKNELSIRWNDPTIGIDWGVETPSLSAKDADAPLLADVKNFPI 194 Query: 181 YGQI 184 +GQ+ Sbjct: 195 HGQV 198 >ref|YP_576368.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrobacter hamburgensis X14] gb|ABE61908.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrobacter hamburgensis X14] Length = 184 Score = 333 bits (853), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 157/184 (85%), Positives = 171/184 (92%) Query: 1 MNVIKTELPEVLIVEPKLFGDQRGFFLETYQSPRYVEHGITRPFVQDNMSRSAYGVLRGL 60 MNVI+TELPEV+I+EP+LFGDQRGFFLETYQ RY E+G++RPF+QDN+SRSA GVLRGL Sbjct: 1 MNVIETELPEVIIIEPRLFGDQRGFFLETYQFHRYAEYGVSRPFIQDNLSRSARGVLRGL 60 Query: 61 HLQNPLTQGKLVTVLRGKVLDVAVDVRVGSPNFGKHVAVELSEDNRRQLWVPRGFAHGFV 120 HLQNPLTQGKLVT LRGKVLDVAVDVRVGSPNFG+HVAVELSE+NRRQLWVPRGFAHGFV Sbjct: 61 HLQNPLTQGKLVTALRGKVLDVAVDVRVGSPNFGRHVAVELSEENRRQLWVPRGFAHGFV 120 Query: 121 VLSETADFFYKCDDFYSPKDELSIRWNDPAIGIKWGVDKPQLSAKDADAPLLADASNLPT 180 VLSETADFFYKCDD YSPKDELSIRW+DPAIGI WG++ P LSAKDA APLLAD NLP Sbjct: 121 VLSETADFFYKCDDLYSPKDELSIRWDDPAIGIDWGLETPFLSAKDAGAPLLADVKNLPV 180 Query: 181 YGQI 184 YGQI Sbjct: 181 YGQI 184 >ref|ZP_01044602.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Nitrobacter sp. Nb-311A] gb|EAQ37383.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Nitrobacter sp. Nb-311A] Length = 184 Score = 327 bits (839), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 154/184 (83%), Positives = 168/184 (91%) Query: 1 MNVIKTELPEVLIVEPKLFGDQRGFFLETYQSPRYVEHGITRPFVQDNMSRSAYGVLRGL 60 MNVI+T +PE +I+EP+LFGDQRGFFLETYQ PRY EHG+ PFVQDN+SRSA GVLRGL Sbjct: 1 MNVIRTGVPEAVIIEPRLFGDQRGFFLETYQFPRYSEHGVACPFVQDNLSRSARGVLRGL 60 Query: 61 HLQNPLTQGKLVTVLRGKVLDVAVDVRVGSPNFGKHVAVELSEDNRRQLWVPRGFAHGFV 120 HLQNP QGKLVTVLRGKVLDVAVDVRVGSPNFG+HVAVELS++NRRQLWVPRGFAHGFV Sbjct: 61 HLQNPFPQGKLVTVLRGKVLDVAVDVRVGSPNFGRHVAVELSDENRRQLWVPRGFAHGFV 120 Query: 121 VLSETADFFYKCDDFYSPKDELSIRWNDPAIGIKWGVDKPQLSAKDADAPLLADASNLPT 180 VLSETADFFYKCDD YSPK+ELSIRWNDPAIGI WGV+ P LSAKDADAPLLA+ NLP Sbjct: 121 VLSETADFFYKCDDLYSPKNELSIRWNDPAIGIDWGVETPSLSAKDADAPLLAEVKNLPL 180 Query: 181 YGQI 184 YGQ+ Sbjct: 181 YGQV 184 >ref|YP_001208828.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Bradyrhizobium sp. ORS 278] emb|CAL80613.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Bradyrhizobium sp. ORS 278] Length = 184 Score = 327 bits (837), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 153/184 (83%), Positives = 171/184 (92%) Query: 1 MNVIKTELPEVLIVEPKLFGDQRGFFLETYQSPRYVEHGITRPFVQDNMSRSAYGVLRGL 60 MNVIKT+LPEV+I+EPKLFGD RGFFLET+Q+ RY E GI PFVQDNMSRS+YGVLRGL Sbjct: 1 MNVIKTDLPEVIILEPKLFGDHRGFFLETFQAARYRELGINGPFVQDNMSRSSYGVLRGL 60 Query: 61 HLQNPLTQGKLVTVLRGKVLDVAVDVRVGSPNFGKHVAVELSEDNRRQLWVPRGFAHGFV 120 HLQNP TQGKLV+ +RG+VLDVAVDVRVGSPNFGKHVAVELSE+NRRQLWVPRGFAHGFV Sbjct: 61 HLQNPNTQGKLVSAMRGRVLDVAVDVRVGSPNFGKHVAVELSEENRRQLWVPRGFAHGFV 120 Query: 121 VLSETADFFYKCDDFYSPKDELSIRWNDPAIGIKWGVDKPQLSAKDADAPLLADASNLPT 180 VLSE+ADFFYKCDD+YSPKDE+S+RWNDPAIGI WGV +P+LS KDA+APLLA+A NLP Sbjct: 121 VLSESADFFYKCDDYYSPKDEMSVRWNDPAIGIDWGVPEPKLSPKDAEAPLLAEARNLPV 180 Query: 181 YGQI 184 YGQI Sbjct: 181 YGQI 184 >ref|YP_002514409.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thioalkalivibrio sulfidophilus HL-EbGr7] gb|ACL73422.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thioalkalivibrio sulfidophilus HL-EbGr7] Length = 189 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 116/183 (63%), Positives = 139/183 (75%), Gaps = 2/183 (1%) Query: 1 MNVIKTELPEVLIVEPKLFGDQRGFFLETYQSPRYVEHGITRPFVQDNMSRSAYGVLRGL 60 MNVI+T LP VL++EP++FGD+RGFF+ETYQ+ RY E GI PFVQDN+S S +G+LRGL Sbjct: 1 MNVIETTLPGVLLIEPRVFGDERGFFMETYQASRYAEAGIAGPFVQDNLSLSRHGILRGL 60 Query: 61 HLQNPLTQGKLVTVLRGKVLDVAVDVRVGSPNFGKHVAVELSEDNRRQLWVPRGFAHGFV 120 HLQ+P QGKLV+VL+G+V DVAVDVR SP FG+ V LSE N+RQLWVP GFAHGF Sbjct: 61 HLQHPGAQGKLVSVLKGEVFDVAVDVRTDSPTFGQWVGEYLSETNKRQLWVPEGFAHGFC 120 Query: 121 VLSETADFFYKCDDFYSPKDELSIRWNDPAIGIKWGVDKPQLSAKDADAPLLADAS--NL 178 V S+ A F YKC YSP+ E+SIRW+DPAIGI+W VD P LS KD LAD + L Sbjct: 121 VTSDEALFAYKCTRLYSPQTEISIRWDDPAIGIQWPVDAPALSQKDQAGLFLADIAPDQL 180 Query: 179 PTY 181 P Y Sbjct: 181 PAY 183