BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0022.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_317166.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter w... 393 e-107 ref|ZP_01044601.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter... 389 e-106 ref|YP_576369.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter h... 373 e-101 ref|YP_001208827.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizo... 296 3e-78 ref|ZP_08189740.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas... 265 7e-69 >ref|YP_317166.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter winogradskyi Nb-255] gb|ABA03814.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter winogradskyi Nb-255] Length = 308 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 193/254 (75%), Positives = 214/254 (84%) Query: 2 LTSQLESLKPDLIINPAAYTAVDRAEDEREQAFLVNAKGPEVMAKWAAANRVPLVHFSTD 61 L L+ KPDLIINPAAYTAVDRAEDERE AFLVNAK P +A+W+A +RVPL+HFSTD Sbjct: 42 LAGALDRFKPDLIINPAAYTAVDRAEDERELAFLVNAKAPAAIAEWSARHRVPLIHFSTD 101 Query: 62 YVFNGSGDRPWREDSPTAPLSVYGASKLAGDAAIQAAGGAHLIARTSWVYAAKGTNFLRT 121 YVF+GSGD+PWREDSPT PLSVYGASKLAGD AI+AAGG HLIARTSWVYAA G NFLRT Sbjct: 102 YVFDGSGDKPWREDSPTGPLSVYGASKLAGDLAIEAAGGPHLIARTSWVYAASGANFLRT 161 Query: 122 IARLAGERKELRIVADQIGAPTTASAIASAVAGIVLPNLTTLHDQLVRRGGVVNLVCAGE 181 IARLAGERKELRIVADQ GAPTTA+ IA AV+ IVL N + L R GGVVNL CAGE Sbjct: 162 IARLAGERKELRIVADQTGAPTTANTIADAVSRIVLSNASDLSALFARSGGVVNLACAGE 221 Query: 182 TSWHGFATAIVGGLRSRGVTLAVENIAPIATADFPTKAVRPGNSRLDLSRLQAQFGVAMP 241 TSWHGFATAIVGGL+SRG L+VE I PIATADFPT+A RPGNSRLDLS+L+ +FG+ P Sbjct: 222 TSWHGFATAIVGGLKSRGAGLSVETIIPIATADFPTRARRPGNSRLDLSQLRERFGLTPP 281 Query: 242 TWQEALARELDAFV 255 TWQ+AL+ ELD V Sbjct: 282 TWQDALSTELDRLV 295 >ref|ZP_01044601.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter sp. Nb-311A] gb|EAQ37382.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter sp. Nb-311A] Length = 308 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/254 (73%), Positives = 214/254 (84%) Query: 2 LTSQLESLKPDLIINPAAYTAVDRAEDEREQAFLVNAKGPEVMAKWAAANRVPLVHFSTD 61 L L++ +PDLI+NPAAYTAVDRAEDER+ AFLVNAK P +A+W+A +RVPL+HFSTD Sbjct: 42 LAGALDAFRPDLIVNPAAYTAVDRAEDERDLAFLVNAKAPAAIAEWSARHRVPLIHFSTD 101 Query: 62 YVFNGSGDRPWREDSPTAPLSVYGASKLAGDAAIQAAGGAHLIARTSWVYAAKGTNFLRT 121 YVF+GSGD+PWREDSPT PLS YGASKLAGD AI AAGG HLIARTSWVYAA G NFLRT Sbjct: 102 YVFDGSGDKPWREDSPTGPLSAYGASKLAGDLAIHAAGGPHLIARTSWVYAATGANFLRT 161 Query: 122 IARLAGERKELRIVADQIGAPTTASAIASAVAGIVLPNLTTLHDQLVRRGGVVNLVCAGE 181 I RLAGER+ELRIVADQIGAPTTA+AIA+AV IV PN + L R GGV+NL C GE Sbjct: 162 IVRLAGEREELRIVADQIGAPTTANAIANAVTRIVYPNTSNLSALFARHGGVINLACVGE 221 Query: 182 TSWHGFATAIVGGLRSRGVTLAVENIAPIATADFPTKAVRPGNSRLDLSRLQAQFGVAMP 241 TSWHGFA+AIV GL+SRG+ L+V+ I PIAT DFPT+A RPGNSRLDLS+LQ +FG+ P Sbjct: 222 TSWHGFASAIVTGLKSRGMKLSVKTIIPIATTDFPTRARRPGNSRLDLSQLQDRFGLTPP 281 Query: 242 TWQEALARELDAFV 255 TWQEAL+RELD+ V Sbjct: 282 TWQEALSRELDSLV 295 >ref|YP_576369.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter hamburgensis X14] gb|ABE61909.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter hamburgensis X14] Length = 304 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 195/254 (76%), Positives = 214/254 (84%) Query: 2 LTSQLESLKPDLIINPAAYTAVDRAEDEREQAFLVNAKGPEVMAKWAAANRVPLVHFSTD 61 L L+ KPDLIINPAAYTAVDRAEDERE AFLVNAKGP +A W+A +RVPL+HFSTD Sbjct: 42 LAEALDGFKPDLIINPAAYTAVDRAEDERELAFLVNAKGPAAIAAWSARHRVPLIHFSTD 101 Query: 62 YVFNGSGDRPWREDSPTAPLSVYGASKLAGDAAIQAAGGAHLIARTSWVYAAKGTNFLRT 121 YVF+GS DRPWREDSPT PLSVYGASKLAGD AI+ AGG HLI RTSWVYAA G NFLRT Sbjct: 102 YVFDGSNDRPWREDSPTGPLSVYGASKLAGDLAIRVAGGPHLIVRTSWVYAASGANFLRT 161 Query: 122 IARLAGERKELRIVADQIGAPTTASAIASAVAGIVLPNLTTLHDQLVRRGGVVNLVCAGE 181 IARLAGERKELRIVADQ+GAPTTASAIA+AVAGIV+ N + L R GGVVNL CAGE Sbjct: 162 IARLAGERKELRIVADQVGAPTTASAIAAAVAGIVVSNGSNLEGLFARNGGVVNLACAGE 221 Query: 182 TSWHGFATAIVGGLRSRGVTLAVENIAPIATADFPTKAVRPGNSRLDLSRLQAQFGVAMP 241 TSW+GFA+AIV GL+SRGV LAVE I PIATADFPT+A RPGNSRLDLSRL+ + V P Sbjct: 222 TSWYGFASAIVAGLKSRGVKLAVEMITPIATADFPTRAKRPGNSRLDLSRLRDRLRVTTP 281 Query: 242 TWQEALARELDAFV 255 TWQEAL+ ELD+ V Sbjct: 282 TWQEALSSELDSLV 295 >ref|YP_001208827.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. ORS 278] emb|CAL80612.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. ORS 278] Length = 302 Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 146/254 (57%), Positives = 181/254 (71%) Query: 2 LTSQLESLKPDLIINPAAYTAVDRAEDEREQAFLVNAKGPEVMAKWAAANRVPLVHFSTD 61 L L+ L PDLI+NPAAYTAVDRAEDE E A VN + P V+A+WAA RVPL+H STD Sbjct: 44 LAGALDRLAPDLILNPAAYTAVDRAEDEAELAMTVNGQAPGVIAQWAAPRRVPLLHVSTD 103 Query: 62 YVFNGSGDRPWREDSPTAPLSVYGASKLAGDAAIQAAGGAHLIARTSWVYAAKGTNFLRT 121 YVF+G+G+ PWRE PLS YG SKLAG+ A+++AGG HLI RT+WV+A+ G NF+RT Sbjct: 104 YVFDGAGEHPWRESDAVGPLSAYGRSKLAGEDAVRSAGGPHLIVRTAWVFASAGANFMRT 163 Query: 122 IARLAGERKELRIVADQIGAPTTASAIASAVAGIVLPNLTTLHDQLVRRGGVVNLVCAGE 181 I RLA ER+ LR+VADQ G PT+A IA +A I+ L R G+V+L +G Sbjct: 164 IVRLAREREALRVVADQKGTPTSARTIAEVIAAILAQGAGDLPGAFARAEGLVHLTNSGA 223 Query: 182 TSWHGFATAIVGGLRSRGVTLAVENIAPIATADFPTKAVRPGNSRLDLSRLQAQFGVAMP 241 TSWHGFA+AIV GLR R V + + I TADFPTKA RP NS+LDLSRL+ +G+ P Sbjct: 224 TSWHGFASAIVDGLRQRNVPVKARAVEAITTADFPTKARRPANSQLDLSRLRGAYGLVPP 283 Query: 242 TWQEALARELDAFV 255 +WQ+AL+RELD V Sbjct: 284 SWQQALSRELDELV 297 >ref|ZP_08189740.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas perforans 91-118] gb|EGD12645.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas perforans 91-118] Length = 299 Score = 265 bits (676), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 135/255 (52%), Positives = 169/255 (66%), Gaps = 8/255 (3%) Query: 2 LTSQLESLKPDLIINPAAYTAVDRAEDEREQAFLVNAKGPEVMAKWAAANRVPLVHFSTD 61 L+ L+ L+P ++N AAYTAVDRAE ER+ AF NA+ P V+A+W A VPLVH+STD Sbjct: 52 LSELLDRLQPSCVVNAAAYTAVDRAEQERDAAFRANAEAPSVIAQWCARASVPLVHYSTD 111 Query: 62 YVFNGSGDRPWREDSPTAPLSVYGASKLAGDAAIQAAGGAHLIARTSWVYAAKGTNFLRT 121 YVF+G G RP+R D TAPL VYG SKLAG+ A+QAAGG HLI RT+WVYAA G NFLRT Sbjct: 112 YVFDGQGTRPYRPDDATAPLGVYGQSKLAGEQAVQAAGGRHLIFRTAWVYAAHGHNFLRT 171 Query: 122 IARLAGERKELRIVADQIGAPTTASAIASAVAGIVLPNLTTLHDQLVRRGGVVNLVCAGE 181 + R+ ER LR+VADQIG PT A+ IA A + Q G+ +L AG+ Sbjct: 172 MLRVGAERDVLRVVADQIGTPTPAALIADITAHAL--------RQPGEPSGLWHLTAAGQ 223 Query: 182 TSWHGFATAIVGGLRSRGVTLAVENIAPIATADFPTKAVRPGNSRLDLSRLQAQFGVAMP 241 T+WHGFA AI R+RG+ + I+TAD+PT A RP SRLD+ LQ FGV +P Sbjct: 224 TTWHGFAEAIFAQARARGLLAHAPRVEAISTADYPTPATRPAYSRLDIHSLQDTFGVRLP 283 Query: 242 TWQEALARELDAFVQ 256 WQ+ L++ LD Q Sbjct: 284 DWQDGLSQVLDTLAQ 298