BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0011.p (331 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001208030.1| UDP-glucose 4-epimerase [Bradyrhizobium sp. ... 560 e-158 ref|YP_001237744.1| UDP-galactose 4-epimerase [Bradyrhizobium sp... 542 e-152 ref|NP_774218.1| UDP-glucose 4'-epimerase [Bradyrhizobium japoni... 430 e-118 ref|YP_578228.1| UDP-glucose 4-epimerase [Nitrobacter hamburgens... 421 e-115 ref|ZP_08423526.1| UDP-glucose 4-epimerase [Desulfovibrio africa... 360 2e-97 >ref|YP_001208030.1| UDP-glucose 4-epimerase [Bradyrhizobium sp. ORS 278] emb|CAL79815.1| UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase) [Bradyrhizobium sp. ORS 278] Length = 331 Score = 560 bits (1444), Expect = e-158, Method: Compositional matrix adjust. Identities = 267/329 (81%), Positives = 302/329 (91%) Query: 1 MASTGSILITGGAGYIGSHCAKAVAKAGFLPVVYDNLSTGHRDFVRWGPLVIGDVADHDR 60 M++ G+ILI GGAGYIG+HC+KAVA+AGF PVVYDNL+TGHR FV+WGPL++GD+AD + Sbjct: 1 MSTKGAILIAGGAGYIGAHCSKAVAEAGFTPVVYDNLTTGHRGFVQWGPLMVGDIADSIK 60 Query: 61 IAATIREHDALAVMHFAAFSAVGESVADPQKYFTNNVAGTLGLLRGMREAGCDRLVFSST 120 IA+TIR++D AVMHFAA+SAVGESVADPQKY+ NNVAGTLGLL+GMREAGC RLVFSST Sbjct: 61 IASTIRQYDVKAVMHFAAWSAVGESVADPQKYYLNNVAGTLGLLQGMREAGCTRLVFSST 120 Query: 121 GAVYGNAGRDPIPESAAGPTVNPYGRSKLMIEQILADYRAAYRFNSVCLRYFNACGADAS 180 GAVYGNAGR+PIPESAAGPTVNPYGRSK MIEQILADYRAAY F++ LRYFNACGADAS Sbjct: 121 GAVYGNAGREPIPESAAGPTVNPYGRSKYMIEQILADYRAAYGFSATALRYFNACGADAS 180 Query: 181 VTIGELRDPETHLIPRALMALLGHVPDFAIFGEDYDTPDGTAVRDYIHVDDLASAHIAAL 240 TIGELRDPETHLIPRALMA+LGHVPDFAIFG DY+TPDGTAVRDYIHVDDLA+AHIAAL Sbjct: 181 GTIGELRDPETHLIPRALMAILGHVPDFAIFGTDYETPDGTAVRDYIHVDDLAAAHIAAL 240 Query: 241 ELLLKGDAGGVFNLGTGTGYSVRQVLDAIRAETGEAVPSVVRERRAGDPPILVADPSRSE 300 LL+G AGG +NLGTG+GYSVR+++DAIR ETGE VP V RERRAGDPPILVADP+R+E Sbjct: 241 GRLLEGGAGGAYNLGTGSGYSVREIVDAIRNETGEQVPLVYRERRAGDPPILVADPTRAE 300 Query: 301 SGLGFKASRSDLGYIIRSAWAWHRKAHPR 329 LGFKA RSDLG++IRSAWAWH+KAHPR Sbjct: 301 QELGFKARRSDLGHVIRSAWAWHQKAHPR 329 >ref|YP_001237744.1| UDP-galactose 4-epimerase [Bradyrhizobium sp. BTAi1] gb|ABQ33838.1| UDP-galactose 4-epimerase [Bradyrhizobium sp. BTAi1] Length = 331 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 257/329 (78%), Positives = 293/329 (89%) Query: 1 MASTGSILITGGAGYIGSHCAKAVAKAGFLPVVYDNLSTGHRDFVRWGPLVIGDVADHDR 60 M + G+ILI GGAGYIG+HC+KAVA AGF P+ YDNL+ GHR FV+WGPLV+GD+AD + Sbjct: 1 MGTKGAILIAGGAGYIGAHCSKAVADAGFTPICYDNLTLGHRSFVQWGPLVVGDIADSIK 60 Query: 61 IAATIREHDALAVMHFAAFSAVGESVADPQKYFTNNVAGTLGLLRGMREAGCDRLVFSST 120 +A+TIR++D AVMHFAA SAVGESVADPQKY+ NNVAGTLGLL+GMREAGC RLVFSST Sbjct: 61 VASTIRQYDVQAVMHFAASSAVGESVADPQKYYLNNVAGTLGLLQGMREAGCTRLVFSST 120 Query: 121 GAVYGNAGRDPIPESAAGPTVNPYGRSKLMIEQILADYRAAYRFNSVCLRYFNACGADAS 180 GAVYGNAGR+PIPESAAGPTVNPYGRSK MIEQIL+DYRAAY F+++ LRYFNACGADAS Sbjct: 121 GAVYGNAGREPIPESAAGPTVNPYGRSKYMIEQILSDYRAAYGFSAIALRYFNACGADAS 180 Query: 181 VTIGELRDPETHLIPRALMALLGHVPDFAIFGEDYDTPDGTAVRDYIHVDDLASAHIAAL 240 IGELRDPETHLIPRALMA+LGHVPDFAIFG DY+TPDGTAVRDYIHVDDLA+AHIAA+ Sbjct: 181 GAIGELRDPETHLIPRALMAILGHVPDFAIFGTDYETPDGTAVRDYIHVDDLAAAHIAAI 240 Query: 241 ELLLKGDAGGVFNLGTGTGYSVRQVLDAIRAETGEAVPSVVRERRAGDPPILVADPSRSE 300 L++G GG +NLGTG+GYSVR+++DAIR ETGE VP V RERR GDPP+LVADP R+E Sbjct: 241 GRLMEGHRGGAYNLGTGSGYSVREIVDAIRNETGEQVPLVYRERRPGDPPVLVADPRRAE 300 Query: 301 SGLGFKASRSDLGYIIRSAWAWHRKAHPR 329 LGFK RSDLG+IIRSAWAWH+KAHPR Sbjct: 301 QELGFKPRRSDLGHIIRSAWAWHQKAHPR 329 >ref|NP_774218.1| UDP-glucose 4'-epimerase [Bradyrhizobium japonicum USDA 110] gb|AAC04827.1| UDP-glucose 4'-epimerase [Bradyrhizobium japonicum] dbj|BAC52843.1| UDP-glucose 4'-epimerase [Bradyrhizobium japonicum USDA 110] Length = 330 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/330 (65%), Positives = 253/330 (76%), Gaps = 2/330 (0%) Query: 1 MASTGSILITGGAGYIGSHCAKAVAKAGFLPVVYDNLSTGHRDFVRWGPLVIGDVADHDR 60 M ++L+TGGAGYIGSH +A++ AG+ PVVYDNLSTGHR FV GPLVIGD+ D Sbjct: 1 MTDRPTVLVTGGAGYIGSHACRALSAAGYQPVVYDNLSTGHRSFVA-GPLVIGDLLDDAA 59 Query: 61 IAATIREHDALAVMHFAAFSAVGESVADPQKYFTNNVAGTLGLLRGMREAGCDRLVFSST 120 +A +H AVMHFAA S VGES+ DPQKY+ NNV GTL LL+ MR AGC R+VFSST Sbjct: 60 LARAFADHKVTAVMHFAAASLVGESMTDPQKYYINNVQGTLSLLQAMRNAGCHRIVFSST 119 Query: 121 GAVYGNAGRDPIPESAAGPTVNPYGRSKLMIEQILADYRAAYRFNSVCLRYFNACGADAS 180 GAVYGNA +PE +NPYG SK MIE++LADYRAAY F + CLRYFNA GAD + Sbjct: 120 GAVYGNADSKELPEDFPCAPINPYGASKWMIERMLADYRAAYGFGAFCLRYFNASGADPA 179 Query: 181 VTIGELRDPETHLIPRALMALLGHVPDFAIFGEDYDTPDGTAVRDYIHVDDLASAHIAAL 240 IGELRD ETHLIPRA+MAL GHV DFA+FG+DYDTPDGTA+RDYIHV DLA+AH+AAL Sbjct: 180 GGIGELRDNETHLIPRAMMALQGHV-DFAVFGDDYDTPDGTAIRDYIHVTDLAAAHVAAL 238 Query: 241 ELLLKGDAGGVFNLGTGTGYSVRQVLDAIRAETGEAVPSVVRERRAGDPPILVADPSRSE 300 +LL +G AGG FNLGTG+G+SVR++L+AIR ETG VP V+ RRAGDP LVADPS + Sbjct: 239 KLLEQGHAGGSFNLGTGSGFSVREILNAIRQETGREVPHTVKPRRAGDPTYLVADPSAAR 298 Query: 301 SGLGFKASRSDLGYIIRSAWAWHRKAHPRR 330 L F SDL +IR+AWAWH+KAHP R Sbjct: 299 KVLNFVPRHSDLPTVIRTAWAWHQKAHPFR 328 >ref|YP_578228.1| UDP-glucose 4-epimerase [Nitrobacter hamburgensis X14] gb|ABE63768.1| UDP-galactose 4-epimerase [Nitrobacter hamburgensis X14] Length = 349 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 209/325 (64%), Positives = 243/325 (74%), Gaps = 5/325 (1%) Query: 1 MASTGSILITGGAGYIGSHCAKAVAKAGFLPVVYDNLSTGHRDFVRWGPLVIGDVADHDR 60 MA ++L+TGGAGYIGSHC KA+A+AG+ PV +DN STGHR FV+WGP++ GDV D + Sbjct: 1 MADRAAVLVTGGAGYIGSHCCKALAEAGYRPVCFDNFSTGHRRFVKWGPMITGDVRDPRQ 60 Query: 61 IAATIREHDALAVMHFAAFSAVGESVADPQKYFTNNVAGTLGLLRGMREAGCDRLVFSST 120 + A + +D AVMHFAA S+VGESV DPQKY+ NNV GTL LL MR AG RLVFSST Sbjct: 61 LQAVFQSYDFSAVMHFAASSSVGESVTDPQKYYANNVGGTLALLSAMRGAGSGRLVFSST 120 Query: 121 GAVYGNAGRDPIPESAAGPTVNPYGRSKLMIEQILADYRAAYRFNSVCLRYFNACGADAS 180 GAVYGNAG ESA VNPYG+SKLMIE+IL+DYR AY NSVC RYFNA GADA Sbjct: 121 GAVYGNAGS----ESAPRFPVNPYGKSKLMIEEILSDYRQAYDLNSVCFRYFNASGADAC 176 Query: 181 VTIGELRDPETHLIPRALMALLGHVPDFAIFGEDYDTPDGTAVRDYIHVDDLASAHIAAL 240 IGE RDPETHLIPRA+MAL G +PDF IFG+DYDTPDGTAVRDYIHV DL SAH+ A+ Sbjct: 177 GAIGECRDPETHLIPRAMMALQGEIPDFGIFGDDYDTPDGTAVRDYIHVTDLVSAHVQAV 236 Query: 241 ELLLKGDAGGVFNLGTGTGYSVRQVLDAIRAETGEAVPSVVRERRAGDPPILVADPSRSE 300 +L+ G GV+NLGTG GYSV +VL AI AE G +P V RR GDP +L+AD S + Sbjct: 237 NMLMGG-MRGVYNLGTGVGYSVSEVLSAIFAEAGSKMPRVYYPRRPGDPSVLIADSSVAR 295 Query: 301 SGLGFKASRSDLGYIIRSAWAWHRK 325 LGF S+LG IIR+AW WH K Sbjct: 296 MHLGFNPIHSNLGTIIRTAWNWHTK 320 >ref|ZP_08423526.1| UDP-glucose 4-epimerase [Desulfovibrio africanus str. Walvis Bay] gb|EGJ50631.1| UDP-glucose 4-epimerase [Desulfovibrio africanus str. Walvis Bay] Length = 326 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 177/326 (54%), Positives = 216/326 (66%) Query: 1 MASTGSILITGGAGYIGSHCAKAVAKAGFLPVVYDNLSTGHRDFVRWGPLVIGDVADHDR 60 M S +L+ GGAGYIGSH K + + G+ VV DNL GHR+F +WG V+GD+AD + Sbjct: 1 MGSKACVLVVGGAGYIGSHACKELHRRGYDVVVLDNLVYGHREFAKWGEFVLGDIADPLQ 60 Query: 61 IAATIREHDALAVMHFAAFSAVGESVADPQKYFTNNVAGTLGLLRGMREAGCDRLVFSST 120 + + + AVMHFAAF+ VGESV DPQKY+ NNVA TL LL+ MR AG D+L+FSST Sbjct: 61 LKLVFKTYPIKAVMHFAAFAYVGESVTDPQKYYLNNVAYTLNLLQAMRGAGVDKLIFSST 120 Query: 121 GAVYGNAGRDPIPESAAGPTVNPYGRSKLMIEQILADYRAAYRFNSVCLRYFNACGADAS 180 A YGN PIPE +NPYGR KLM+E I+ADY AY F V LRYFNA GAD Sbjct: 121 CATYGNPQVIPIPEDHPQAPINPYGRGKLMVENIMADYAQAYGFKYVSLRYFNAAGADPE 180 Query: 181 VTIGELRDPETHLIPRALMALLGHVPDFAIFGEDYDTPDGTAVRDYIHVDDLASAHIAAL 240 +GE DPETHLIP L A L IFG DYDTPDGT +RDYIHV DLA AHI AL Sbjct: 181 AEVGEWHDPETHLIPLVLRAALEPDKPIKIFGTDYDTPDGTCIRDYIHVTDLADAHILAL 240 Query: 241 ELLLKGDAGGVFNLGTGTGYSVRQVLDAIRAETGEAVPSVVRERRAGDPPILVADPSRSE 300 E LL G+ GGVFNLG G GYSVR++++ R TG A+P + +RR GDP LV +R + Sbjct: 241 EYLLAGEKGGVFNLGNGQGYSVREIIETTRQVTGRAIPVIEDKRRPGDPARLVGSSARIK 300 Query: 301 SGLGFKASRSDLGYIIRSAWAWHRKA 326 S G+K ++ I+ +AW WH +A Sbjct: 301 SEFGWKPQNIEIERILSTAWKWHSRA 326