BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0009.p (512 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001979099.1| hypothetical protein RHECIAT_CH0002972 [Rhiz... 316 5e-84 gb|EGE61446.1| hypothetical protein RHECNPAF_114005 [Rhizobium e... 300 5e-79 ref|YP_002976627.1| hypothetical protein Rleg_2828 [Rhizobium le... 293 5e-77 ref|YP_470318.1| hypothetical protein RHE_CH02823 [Rhizobium etl... 283 5e-74 ref|YP_002282065.1| hypothetical protein Rleg2_2567 [Rhizobium l... 280 5e-73 >ref|YP_001979099.1| hypothetical protein RHECIAT_CH0002972 [Rhizobium etli CIAT 652] gb|ACE91921.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 530 Score = 316 bits (810), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 200/516 (38%), Positives = 295/516 (57%), Gaps = 33/516 (6%) Query: 20 WVALVGFQIGRHVMWRDEVRALTIALNGDDPVAMLRGLRGEGHPALWYLLLRGAHAVFDR 79 W A+ +WRDEVRAL++AL GD MLR + GEGHPALWY+LLR AH V Sbjct: 25 WFAVACALCWSETVWRDEVRALSLALQGDSFFDMLRQMHGEGHPALWYMLLRAAHLVVGS 84 Query: 80 VEVLPAVAFVVGLLTVALLIFRSPFPRPLVLLLITGHALLFEYVVMARNYGISALLLFAI 139 VL VA + + LL+FR PR ++LL + +F+Y MARNYGIS LL+F I Sbjct: 85 PVVLKIVALTIAAASAYLLVFRLELPRSIMLLSLFSSFSVFDYAAMARNYGISMLLVFLI 144 Query: 140 AACYRAHRDRGLLLGALLFLLANTNVVGAIMAGAFLLFWLLDLLETQLASHGRRWXTNFA 199 A + G++LG L LLANTNV ++ G FL +W DL+ + + A Sbjct: 145 ALSWVRGMRNGMVLGLLFALLANTNVHSVVLVGGFLAYWFFDLVLARPRPSLPAYRAF-A 203 Query: 200 INATIATIGVVICAVTMLPTYNDAAARDWSHES--------------------PLAAAIL 239 A IA +GVV+C +T+ PT+NDA + + ++ P L Sbjct: 204 TAAVIAAVGVVLCVMTVYPTFNDAGQNNLAGKNFAPLVLHAFAGATSYFMEFYPDGILRL 263 Query: 240 ALVNPGATSLGALFANLLPGVAGSALLFGATLGLLPRRPAFLAAIAALLLTSLFFAVAAN 299 A+ +P S+ +FA+L+ + L++G+ LGL RRPA LAA + LL SL F + Sbjct: 264 AVADP---SIARVFASLM-----AVLIYGSLLGLANRRPAMLAAASVLLGFSLLFTLVYP 315 Query: 300 GAYRHAAVWLSFLIALY-WIGWSKVTAPSVSRAWLDRRLPAIGRVSLLLVLAIQTAAGIN 358 G+YRH A+WL F+I + I S+ A ++ + IGR+ +++LA+Q A+GI Sbjct: 316 GSYRHQALWLVFMIGMIALISRSRSAAAGITGVEPAGGVVKIGRLCFMILLALQVASGIE 375 Query: 359 DLRNAV-TGVVASRSADLGRLIASRADLANAVILSEPEWLVEALPYYVKNRTYLARDHKL 417 + + T + SR+ DLG I SR +L +A+I+++P++LVE LPYY+ NRTYL R+ + Sbjct: 376 KVHQFLFTDIPFSRARDLGSFIQSRPNLRDAIIMADPDYLVEPLPYYIPNRTYLLREQRF 435 Query: 418 GSVVIFSRKGKMDSDLGETLRLARELRDTSRAPAIILLAYRLDEITPDRIYDEGKDWRTF 477 G++V ++R ++ L + L+ AR+L+ + AP +ILL+ RLD+I E +W Sbjct: 436 GAIVRYTRNARLSLSLADILQTARQLQQSEHAPIVILLSQRLDQIAGPVSLHESYNW-LL 494 Query: 478 RASAAQIRDFREATTMLRRFGP-AKTDESFDVYLLN 512 + +I FR TT+L+RFGP A +DE+FD YLLN Sbjct: 495 SLTPEEISAFRSETTLLKRFGPVAGSDETFDAYLLN 530 >gb|EGE61446.1| hypothetical protein RHECNPAF_114005 [Rhizobium etli CNPAF512] Length = 485 Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 189/495 (38%), Positives = 284/495 (57%), Gaps = 33/495 (6%) Query: 41 LTIALNGDDPVAMLRGLRGEGHPALWYLLLRGAHAVFDRVEVLPAVAFVVGLLTVALLIF 100 +++AL GD + MLR + GEGHPALWY+LLR AH V VL VA + + LL+F Sbjct: 1 MSLALQGDSFIDMLRQMHGEGHPALWYMLLRAAHLVVGSPVVLKIVALTIAAASAYLLVF 60 Query: 101 RSPFPRPLVLLLITGHALLFEYVVMARNYGISALLLFAIAACYRAHRDRGLLLGALLFLL 160 R PR ++LL + +F+Y MARNYGIS LL+F IA + G++LG L LL Sbjct: 61 RLELPRSIMLLSLFSSFSVFDYAAMARNYGISMLLVFLIALSWERGMRNGMVLGLLFALL 120 Query: 161 ANTNVVGAIMAGAFLLFWLLDLLETQLASHGRRWXTNFAINATIATIGVVICAVTMLPTY 220 ANTNV ++ G FL +W+ DL+ + + A A IA +GVV+C +T+ PT+ Sbjct: 121 ANTNVHSVVLVGGFLAYWIFDLVLARPRPSLPAYRAF-ATAAVIAAVGVVLCVMTVYPTF 179 Query: 221 NDAAARDWSHES--------------------PLAAAILALVNPGATSLGALFANLLPGV 260 NDA + + ++ P LA+ +P S+ +FA+L+ Sbjct: 180 NDAGQNNLAGKNFAPLVLHAFAGATSYFMEFYPDGILRLAVADP---SIARVFASLM--- 233 Query: 261 AGSALLFGATLGLLPRRPAFLAAIAALLLTSLFFAVAANGAYRHAAVWLSFLIALY-WIG 319 + L++G+ LGL RRPA LAA + LL SL F + G+YRH A+WL F+I + I Sbjct: 234 --AVLIYGSLLGLANRRPAMLAAASVLLGFSLLFTLVYPGSYRHQALWLVFMIGMIALIS 291 Query: 320 WSKVTAPSVSRAWLDRRLPAIGRVSLLLVLAIQTAAGINDLRNAV-TGVVASRSADLGRL 378 S+ A ++ + IGR+ +++LA+Q A+GI + + T + R+ DLG Sbjct: 292 RSRSAAVGIAGVGPAGGVVKIGRLCFMILLALQVASGIEKVHQFLFTDIPFGRARDLGSF 351 Query: 379 IASRADLANAVILSEPEWLVEALPYYVKNRTYLARDHKLGSVVIFSRKGKMDSDLGETLR 438 I SR DL +A+I+++P++LVE LPYY+ NRTYL R+ + G++V ++R ++ L + L+ Sbjct: 352 IQSRPDLRDAIIMADPDYLVEPLPYYIPNRTYLLREQRFGAIVRYTRNARLSLSLADILQ 411 Query: 439 LARELRDTSRAPAIILLAYRLDEITPDRIYDEGKDWRTFRASAAQIRDFREATTMLRRFG 498 AR+L+ + AP +IL + RLD+I E +W + +I FR TT+L+RFG Sbjct: 412 TARQLQQSEHAPIVILFSQRLDQIAGPVSLHESYNW-LLSLTPEEISAFRSETTLLKRFG 470 Query: 499 P-AKTDESFDVYLLN 512 P A +DE+FD YLLN Sbjct: 471 PVAGSDETFDAYLLN 485 >ref|YP_002976627.1| hypothetical protein Rleg_2828 [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS57088.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 508 Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 196/519 (37%), Positives = 283/519 (54%), Gaps = 39/519 (7%) Query: 20 WVALVGFQIGRHVMWRDEVRALTIALNGDDPVAMLRGLRGEGHPALWYLLLRGAHAVFDR 79 W+AL +WRDEVRAL++AL GD+ + MLR + GEGHPALWY+LLR A+ + Sbjct: 3 WLALASALCWFETVWRDEVRALSLALQGDNFIDMLRQMHGEGHPALWYILLRAAYVLVGS 62 Query: 80 VEVLPAVAFVVGLLTVALLIFRSPFPRPLVLLLITGHALLFEYVVMARNYGISALLLFAI 139 VL VA + LL+FR P ++LL + +++Y M+RNYGIS L++F I Sbjct: 63 PVVLKIVALTIAATAAYLLVFRLKLPLSIMLLSLFSSFSVYDYAAMSRNYGISMLVIFLI 122 Query: 140 AACYRAHRDRGLLLGALLFLLANTNVVGAIMAGAFLLFWLLDLLETQLASHGRRWXTNF- 198 + GLLLG L L ANTNV ++ G FL +W DL + + R T + Sbjct: 123 VLSWEKGTRNGLLLGLLFALQANTNVHSVVLVGGFLAYWFFDL----ILARPRPAVTEYR 178 Query: 199 --AINATIATIGVVICAVTMLPTYNDAAARDWSHESPLAAAILALVNPGATSLGALFANL 256 A A IA +G+V+C VT+ PT+ND D S ++ A+ AL P + + ++ Sbjct: 179 AFATAAAIAAVGIVLCFVTVYPTFNDTGQNDLSGKNFALLALGALAAPSSHFMEFYPNSV 238 Query: 257 LPGVAG------------SALLFGATLGLLPRRPAFLAAIAALLLTSLFFAVAANGAYRH 304 L V S L++G+ L L RRPA +AA L+ SL F + G YRH Sbjct: 239 LELVVAYPLASRIFAALMSVLIYGSLLALAHRRPAMIAAGLILVGLSLLFTLVYPGGYRH 298 Query: 305 AAVWLSFLIALYWIGWSKVTAPSVSRAWLDRRLPAI---------GRVSLLLVLAIQTAA 355 A+WL F+IA +TA + R I GR+ L++LA+Q + Sbjct: 299 QALWLVFMIA--------ITALTTHTQRERTRAAGIEAAGGFVKFGRLCFLILLALQVVS 350 Query: 356 GINDLRNA-VTGVVASRSADLGRLIASRADLANAVILSEPEWLVEALPYYVKNRTYLARD 414 GI + A + + SRS DLG I SR DL +AVI+++P++LVEALPYYV NRTYL R+ Sbjct: 351 GIEKINQAFIAEIPLSRSKDLGAFIQSRPDLKDAVIMADPDYLVEALPYYVPNRTYLLRE 410 Query: 415 HKLGSVVIFSRKGKMDSDLGETLRLARELRDTSRAPAIILLAYRLDEITPDRIYDEGKDW 474 + G++V ++R ++ L + L+ A L+ + P +ILL+ RLD+IT E W Sbjct: 411 ERFGAIVRYTRNARLSLSLADILQTAHRLQQSEHVPVVILLSQRLDQITAPVSLRESYVW 470 Query: 475 RTFRASAAQIRDFREATTMLRRFGP-AKTDESFDVYLLN 512 R + I F+ AT +++RFG A +DE+FDVY+L Sbjct: 471 R-LSLTPEDISAFQSATNLIKRFGTVAGSDETFDVYVLK 508 >ref|YP_470318.1| hypothetical protein RHE_CH02823 [Rhizobium etli CFN 42] gb|ABC91591.1| hypothetical protein RHE_CH02823 [Rhizobium etli CFN 42] Length = 530 Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 196/513 (38%), Positives = 289/513 (56%), Gaps = 17/513 (3%) Query: 15 LLLAGWVALVGFQIGRHVMWRDEVRALTIALNGDDPVAMLRGLRGEGHPALWYLLLRGAH 74 L+ W+AL +WRDEVRAL++AL GD+ MLR + GEGHPA+WY+LLR AH Sbjct: 20 LIFFVWLALASALCWSETVWRDEVRALSLALQGDNFADMLRQMHGEGHPAIWYILLRAAH 79 Query: 75 AVFDRVEVLPAVAFVVGLLTVALLIFRSPFPRPLVLLLITGHALLFEYVVMARNYGISAL 134 + VL VA + LL+FR P ++LL + G +FEY M+RNYGIS L Sbjct: 80 VLVGSPVVLKVVALTIAAAAAYLLVFRLKLPLSIMLLSLFGSFSVFEYAAMSRNYGISML 139 Query: 135 LLFAIAACYRAHRDRGLLLGALLFLLANTNVVGAIMAGAFLLFWLLDLLETQLASHGRRW 194 ++F I ++ G+ G L LLANTNV ++ G FL +W DL+ + S R + Sbjct: 140 MVFVIVLTWQKGVRNGIWNGLLFALLANTNVHSVVLVGGFLAYWFFDLVLARPRSPLREY 199 Query: 195 XTNFAINATIATIGVVICAVTMLPTYNDAAARDWSHESPLAAAILALVNPGA-------- 246 FA A +A +GVV+C +T+ PT+ND D S E+ A+ AL + Sbjct: 200 -RGFATAAVLAAVGVVLCFLTVYPTFNDTGQNDISGENFALLALRALAPASSQFLSFYPD 258 Query: 247 TSLGALFANLLP----GVAGSALLFGATLGLLPRRPAFLAAIAALLLTSLFFAVAANGAY 302 + LG + A+ L S L++G+ LG+ RR A +AA LL SL F + G Y Sbjct: 259 SILGLMVADPLAFRIFAALMSVLIYGSLLGMANRRAAMIAAALVLLGLSLLFTLVYPGGY 318 Query: 303 RHAAVWLSFLIALYWIGWS-KVTAPSVSRAWLDRRLPAIGRVSLLLVLAIQTAAGINDL- 360 RH A+WL F+IA+ + + V+ A R+ GR+ +++LA+Q + + + Sbjct: 319 RHQALWLVFMIAMTALTTDMQRDRAGVAGATAAGRIVKFGRLCFMILLALQVVSAVEKVN 378 Query: 361 RNAVTGVVASRSADLGRLIASRADLANAVILSEPEWLVEALPYYVKNRTYLARDHKLGSV 420 R V + SRS D G + SR +L +A+I+++P++LVEALPYYV NRTYL R+ + G++ Sbjct: 379 RTFVAEIPFSRSKDFGAFMQSRPELKDAIIMADPDYLVEALPYYVSNRTYLLREERFGAI 438 Query: 421 VIFSRKGKMDSDLGETLRLARELRDTSRAPAIILLAYRLDEITPDRIYDEGKDWRTFRAS 480 V ++R ++ L + L+ AR LR + + P IILL+ RLD+IT E WR + Sbjct: 439 VRYTRNARLSLSLADILQSARRLRQSEKVPVIILLSQRLDQITAAVSLRESYVWR-LSLT 497 Query: 481 AAQIRDFREATTMLRRFGPA-KTDESFDVYLLN 512 I F+ AT +++RFGPA +DES+D Y+L Sbjct: 498 PEDISAFQSATELIKRFGPAVGSDESYDAYVLK 530 >ref|YP_002282065.1| hypothetical protein Rleg2_2567 [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI55839.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 530 Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 200/514 (38%), Positives = 287/514 (55%), Gaps = 19/514 (3%) Query: 15 LLLAGWVALVGFQIGRHVMWRDEVRALTIALNGDDPVAMLRGLRGEGHPALWYLLLRGAH 74 L+ + W+AL +WRDEVRAL++AL GD+ MLR L GEGHPALWY+LLR A+ Sbjct: 20 LIFSVWLALASALCWSETVWRDEVRALSLALQGDNFADMLRQLHGEGHPALWYILLRAAY 79 Query: 75 AVFDRVEVLPAVAFVVGLLTVALLIFRSPFPRPLVLLLITGHALLFEYVVMARNYGISAL 134 V VL VA VV LL+FR P P++LL + G +FEY M+RNYGIS L Sbjct: 80 VVVGSPVVLKVVALVVAGAAAYLLVFRLKLPLPIMLLSLFGSFSIFEYAAMSRNYGISML 139 Query: 135 LLFAIAACYRAHRDRGLLLGALLFLLANTNVVGAIMAGAFLLFWLLDLLETQLASHGRRW 194 + F I + GLL+G L LLANTNV ++ G FL +W DL+ + R + Sbjct: 140 VTFLIVLIWEKGARNGLLIGLLFALLANTNVHSVVLVGGFLAYWFFDLVLARPRPPLREY 199 Query: 195 XTNFAINATIATIGVVICAVTMLPTYNDAAARDWSHESPLAAAILALVNPGATSLGALFA 254 FA A IA IG+V+C +T+ PT+ND D S E+ A+ AL P + + Sbjct: 200 -RGFATAAAIAAIGIVVCFLTVYPTFNDTGQNDLSGENFALLALRALALPSSHFMSFYPD 258 Query: 255 NLLPGVAG------------SALLFGATLGLLPRRPAFLAAIAALLLTSLFFAVAANGAY 302 ++L + SAL++G+ L R PA +AA LL SL F G Y Sbjct: 259 SILELMVAYPLAFRIFAALMSALIYGSLFALANRWPAMIAAALVLLGLSLLFTFVYPGGY 318 Query: 303 RHAAVWLSFLIALYWIGWSKVTAPSVSRAWLDRRLPAI--GRVSLLLVLAIQTAAGINDL 360 RH A+WL F+IA+ + +K + + GR+ L++LA+Q +GI + Sbjct: 319 RHQALWLVFMIAMTALS-TKFQGEGAGVVGMKAAGGGVKFGRLCFLILLALQVVSGIEKV 377 Query: 361 RNA-VTGVVASRSADLGRLIASRADLANAVILSEPEWLVEALPYYVKNRTYLARDHKLGS 419 A V + SRS D G + SR DL +A+I+++P++LVEALPYY+ NRTYL R+ + G+ Sbjct: 378 NRAFVAEIPFSRSKDFGAFMQSRPDLKDAIIMADPDYLVEALPYYLSNRTYLPREERFGA 437 Query: 420 VVIFSRKGKMDSDLGETLRLARELRDTSRAPAIILLAYRLDEITPDRIYDEGKDWRTFRA 479 +V ++R ++ L + L+ AR L+ + + P +ILL+ RLD+IT E WR Sbjct: 438 IVRYTRNARLSLSLADMLQTARRLQQSEQVPVVILLSQRLDQITAPVSLRESYVWR-LSL 496 Query: 480 SAAQIRDFREATTMLRRFGPAK-TDESFDVYLLN 512 + I FR AT +++RFGPA +DE++D Y+L Sbjct: 497 TPEDISAFRNATELVKRFGPAAGSDETYDAYVLK 530