BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0008.p (334 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001208819.1| hypothetical protein BRADO7018 [Bradyrhizobi... 326 4e-87 ref|NP_772521.1| hypothetical protein blr5881 [Bradyrhizobium ja... 149 5e-34 ref|YP_001237220.1| hypothetical protein BBta_1062 [Bradyrhizobi... 139 7e-31 gb|EGR45538.1| glycosyltransferase family 62 [Trichoderma reesei... 42 0.12 ref|YP_470833.1| hypothetical protein RHE_CH03343 [Rhizobium etl... 40 0.73 >ref|YP_001208819.1| hypothetical protein BRADO7018 [Bradyrhizobium sp. ORS 278] emb|CAL80604.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 392 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 193/376 (51%), Positives = 244/376 (64%), Gaps = 46/376 (12%) Query: 1 VEFALVLARTIDSVSSDPQQLRSAVYELARQKLQQLAHEDPAEKQRLMQALEAAIEGVEA 60 VEFALVLARTID+VS+DP+QLRSAVYELAR KLQ+LA EDP+EKQRLM+ALE AIEGVEA Sbjct: 21 VEFALVLARTIDAVSADPEQLRSAVYELARHKLQELATEDPSEKQRLMKALEVAIEGVEA 80 Query: 61 HTKSNVIEKFEVPPARALPAFLEAAGAARRIEAPPPIDAEAAFVTTLDRVEPAAVSRRPR 120 HT++N K PP+ + G E P+ + T +P + PR Sbjct: 81 HTQNNGPAKLP-PPSNVRAVQIVHDGVLGGPERSGPLRGDPIAHTIWP--DPNGATAPPR 137 Query: 121 ----WSSSAPLRYIVMLAFFGLIAAVVLLQQRGVSLAAARAMIAGTLA---SAPPETQRP 173 WSSS PLR++VML G ++ LQ+R + ++ R +AG L+ +AP E +P Sbjct: 138 RRRAWSSSVPLRFLVMLGILGAAVTLIALQRRD-AFSSLRTNVAGLLSGRQAAPVEAVKP 196 Query: 174 --------XSRRRRDGHCRP-PT----------------VFMPRAP------AXAITRPS 202 + + RP PT + RAP + AIT+PS Sbjct: 197 PAATLAVPATPEPQMEPKRPLPTAYGVYAEVADKLFELEILQGRAPDPRVAISAAITKPS 256 Query: 203 ETTLPDGHLRFIVFRREGAGGASDPIDVRLIAHVSQQTTFDAAGKPVV---SPGDDSWVI 259 T LPDGH++FIVFRRE ASDPI+VR+IA V+Q TTFDA+GKP++ S + +WV+ Sbjct: 257 TTVLPDGHVKFIVFRRESGAAASDPIEVRIIARVNQVTTFDASGKPLLAAASSEEKTWVM 316 Query: 260 RNISIPFRAAPLKDDPQMFEVLPRD-DAPLPPGRYALILKAKAYDFTVEGAVTDKRHCLQ 318 RN+SIPFRAAPLK+DPQM EV PR+ DAPLPPGRYAL+LK +A+DFTVEG VTD+R C+Q Sbjct: 317 RNVSIPFRAAPLKEDPQMIEVQPREPDAPLPPGRYALVLKTQAFDFTVEGTVTDRRQCMQ 376 Query: 319 RLAAANGVFYSECEKP 334 RL+AANG FYSECEKP Sbjct: 377 RLSAANGTFYSECEKP 392 >ref|NP_772521.1| hypothetical protein blr5881 [Bradyrhizobium japonicum USDA 110] dbj|BAC51146.1| blr5881 [Bradyrhizobium japonicum USDA 110] Length = 381 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 124/374 (33%), Positives = 186/374 (49%), Gaps = 58/374 (15%) Query: 1 VEFALVLARTIDSVSSDPQQLRSAVYELARQKLQ-QLAHEDPAEKQRLMQALEAAIEGVE 59 V+FALV++R +++V DP+ R VY+LAR KLQ Q + D ++ +ALE AIE VE Sbjct: 21 VQFALVISRMLETVKDDPEFRRQLVYDLARYKLQEQFTYADAKNIDQMKRALEVAIEEVE 80 Query: 60 AHTKSNVIEKFEVPPARALPAFLEAAGAARRIEAPPPIDAEAAFVTTLDRVEPAAVSRRP 119 ++ E P R L +A A P + A+A + + SRRP Sbjct: 81 KFSRE------EAPLERLPQHQLTSAKAGE--TGGPLLSADAPVLRS-----AIETSRRP 127 Query: 120 RWSSSAPLRYIVMLAFFGLIAA---VVLLQQRGVSLAAARAMI---AGTLASAPP--ETQ 171 + S PL ++ L+AA V+L+ QR +AA R ++ A +A PP ET Sbjct: 128 --AISGPLWPVMKRTGAILLAAGAIVLLISQRD-HIAALRRLVSSQAQEIALVPPRPETT 184 Query: 172 RPXSRRRRDGHCRPP---TVFMPR----------------------------APAXAITR 200 S+ PP T +P A + + Sbjct: 185 ITVSKPEMVTAVAPPLKPTRVLPTDYGVYALIDDKSLAELNATGVMAPDMRVAISPEFKK 244 Query: 201 PSETTLPDGHLRFIVFRREGAGGASDPIDVRLIAHVSQQTTFDAAGKPVVSPGDDSWVIR 260 P LP+G ++FIVFRR+ A + ++VR++A ++++ + DAAGK ++ GDD VIR Sbjct: 245 PDRPHLPNGRVKFIVFRRDAAHAIPERVEVRVVAKIAREFSTDAAGK-TLNGGDDVGVIR 303 Query: 261 NISIPFRAAPLKDDPQMFEVLPRD-DAPLPPGRYALILKAKAYDFTVEGAVTDKRHCLQR 319 N + PFR +P+ P+M E+ D + L PG Y L L +AY F V+G +TD R CL+R Sbjct: 304 NFAYPFRVSPIPGTPEMHELHTGDSELELAPGHYVLSLGTQAYYFQVDGEITDPRQCLER 363 Query: 320 LAAANGVFYSECEK 333 + A NG FY+ C+K Sbjct: 364 VVAGNGTFYAPCKK 377 >ref|YP_001237220.1| hypothetical protein BBta_1062 [Bradyrhizobium sp. BTAi1] gb|ABQ33314.1| hypothetical protein BBta_1062 [Bradyrhizobium sp. BTAi1] Length = 399 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 68/137 (49%), Positives = 89/137 (64%), Gaps = 1/137 (0%) Query: 198 ITRPSETTLPDGHLRFIVFRREGAGGASDPIDVRLIAHVSQQTTFDAAGKPVVSPGDDSW 257 I +PS TTLPDG +RF++FRR+ AG A + ++VR++A V++ +FDA GK VV+P D+W Sbjct: 261 INQPSRTTLPDGKVRFLLFRRDLAGNAPERLEVRVVARVTRALSFDAKGKLVVTPVTDAW 320 Query: 258 VIRNISIPFRAAPLKDDPQMFEVLPRD-DAPLPPGRYALILKAKAYDFTVEGAVTDKRHC 316 IRN S R P+ P+M D LPPGRY L + +AYDFTV GAVT+ C Sbjct: 321 NIRNKSYELRLRPVAGHPEMLLAQSEKVDFALPPGRYVLAFREQAYDFTVAGAVTELAQC 380 Query: 317 LQRLAAANGVFYSECEK 333 L+R A NG FYSEC Sbjct: 381 LERTDAVNGSFYSECNN 397 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Query: 1 VEFALVLARTIDSVSSDPQQLRSAVYELARQKLQ-QLAHEDPAEKQRLMQALEAAIEGVE 59 +E+AL L R I ++ DP +LR VY+ AR +L+ Q + D E++RL+ ALE AI+GVE Sbjct: 21 IEYALTLQRMITRLTEDPAELRLTVYDFARARLKDQSSWMDSTEQERLVAALETAIQGVE 80 >gb|EGR45538.1| glycosyltransferase family 62 [Trichoderma reesei QM6a] Length = 404 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 118 RPRWSSSAPLRYIVMLAFFGLIAAVVLLQQRGVSLAAARAMIAGTLASA-PPETQRPXSR 176 R W++ R+I+++ GLI LL RGVS +A+ A PP P Sbjct: 21 RALWNAVTRTRFILLVGITGLI----LLLWRGVSTSASEMQSFYCWGPAKPPMEMSPNEH 76 Query: 177 RRRDGHCRPPTVFMPRAP 194 R +GH + P +F AP Sbjct: 77 NRWNGHLQTPVIFNHHAP 94 >ref|YP_470833.1| hypothetical protein RHE_CH03343 [Rhizobium etli CFN 42] gb|ABC92106.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 828 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 6/99 (6%) Query: 2 EFALVLARTIDSVSSDPQQLRSAVYELARQKLQ-QLAHEDP----AEKQRLMQALEAAIE 56 +F V+ R +D ++ + ++R VYE AR +Q QL + P A QR ++ LEAAI Sbjct: 3 DFIAVIRRAVDGLAENTPEMRVKVYERARGAVQRQLENMKPRPPEAMLQRQLEKLEAAIR 62 Query: 57 GVEAHTKSNVIEKFEVPPARALPAFLEAAGAARRIEAPP 95 VEA S + E A A P LE A +PP Sbjct: 63 EVEAE-HSEALPLDEATDAGAAPETLEEQAVADESTSPP 100