BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0003.p (458 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769762.1| two-component sensor histidine kinase [Bradyrhi... 808 0.0 ref|YP_001239093.1| putative two-component sensor histidine kina... 786 0.0 ref|YP_001204779.1| putative two-component sensor histidine kina... 785 0.0 ref|YP_576716.1| periplasmic sensor signal transduction histidin... 753 0.0 ref|YP_780853.1| periplasmic sensor signal transduction histidin... 744 0.0 >ref|NP_769762.1| two-component sensor histidine kinase [Bradyrhizobium japonicum USDA 110] dbj|BAC48387.1| two-component sensor histidine kinase [Bradyrhizobium japonicum USDA 110] Length = 458 Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/458 (85%), Positives = 430/458 (93%) Query: 1 MGGSSLATRLFVSATAWVVVILAITGVILSSVYRDATERAFDRRLNLYLRTLIAEVATPD 60 M SSLA RLF+SATAW+VVILAITGV+LSSVY++ATERAFDRRLNLYLRTLIAEVATPD Sbjct: 1 MPASSLANRLFLSATAWLVVILAITGVVLSSVYKNATERAFDRRLNLYLRTLIAEVATPD 60 Query: 61 EPADRQFQSLGEPLFDLPLSGWYWQITRTDTEKGETRASRSLWDKKLPKLEEHGAELTAA 120 EP DRQFQSLGEPLF+LPLSGWYWQITRTDTEK E R+SRSLWDKKLPKLEEHGAELTAA Sbjct: 61 EPPDRQFQSLGEPLFELPLSGWYWQITRTDTEKPEVRSSRSLWDKKLPKLEEHGAELTAA 120 Query: 121 GVRLGYVDGPEGQSLRVVERPVDLGADGKFLVSVAGDATEIFDETRSFDYYLGGTFAALG 180 G+RLGYVDGPEGQ+LR+VERPVDLGADGK+LVSVAGD +EIFDETRSFDYYLGGTF ALG Sbjct: 121 GIRLGYVDGPEGQNLRMVERPVDLGADGKYLVSVAGDDSEIFDETRSFDYYLGGTFTALG 180 Query: 181 VVLLLTTVFQVRYGLAPLKRISDAIADIRSGRAERLEGRFPVEIAPLARETNALIDANRE 240 +VLLLTTVFQVR+GLAPLKRIS++IADIRSGRAERLEG FPVEIAPLARETNALIDANRE Sbjct: 181 IVLLLTTVFQVRFGLAPLKRISESIADIRSGRAERLEGEFPVEIAPLARETNALIDANRE 240 Query: 241 IVERSRTHVGNLAHAIKTPLSVIVNEAGAHAGDPFASKVLEQADLMRDQVAHHLERARIA 300 IVER+RTHVGNLAHAIKTPLSVIVNEAG HA DPFA+KV+EQAD+MRDQVAHHLERARIA Sbjct: 241 IVERARTHVGNLAHAIKTPLSVIVNEAGVHAADPFAAKVMEQADVMRDQVAHHLERARIA 300 Query: 301 ARATIVSTITDVAPVIEALRRTMEKIHRDRDLSIEAKADLAARFRGERQDLEEMVGNLVD 360 AR ++V+T+T+VAP IEALRRTMEKIHRDR + +EAKAD +A+FRGERQDLEEMVGNLVD Sbjct: 301 ARVSVVATVTEVAPAIEALRRTMEKIHRDRGIMVEAKADPSAKFRGERQDLEEMVGNLVD 360 Query: 361 NACKWAASQVLVEVTVVPPEASGAGPRLRIVVDDDGRGLSEAERAQVSRRGQRLDESKPG 420 NACKWAAS+V +EV V P +GAGPRLRI+VDDDGRGLSEAER QVSRRGQRLDESKPG Sbjct: 361 NACKWAASRVFIEVLVEVPHKAGAGPRLRIIVDDDGRGLSEAERTQVSRRGQRLDESKPG 420 Query: 421 SGLGLSIVTDLAGLYGGNLTLNNAPIGGLRAEIMLPAV 458 SGLGLSIV DLA LYGG+L+L APIGGLRAE++LP + Sbjct: 421 SGLGLSIVVDLAALYGGSLSLGAAPIGGLRAELVLPGI 458 >ref|YP_001239093.1| putative two-component sensor histidine kinase [Bradyrhizobium sp. BTAi1] gb|ABQ35187.1| Putative Two-component sensor histidine kinase [Bradyrhizobium sp. BTAi1] Length = 458 Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/458 (83%), Positives = 422/458 (92%) Query: 1 MGGSSLATRLFVSATAWVVVILAITGVILSSVYRDATERAFDRRLNLYLRTLIAEVATPD 60 M SSLATRLF+SATAW+VVILAITG++LSSVYR+ATERAFDRRLNLYLRTLIAEVATPD Sbjct: 1 MRQSSLATRLFLSATAWLVVILAITGIVLSSVYRNATERAFDRRLNLYLRTLIAEVATPD 60 Query: 61 EPADRQFQSLGEPLFDLPLSGWYWQITRTDTEKGETRASRSLWDKKLPKLEEHGAELTAA 120 +P +RQFQSLGEPLF+LPLSGWYWQITRTD +K E RASRSLWDKKLPKLE+ G ELTAA Sbjct: 61 DPPERQFQSLGEPLFELPLSGWYWQITRTDADKPEVRASRSLWDKKLPKLEDQGIELTAA 120 Query: 121 GVRLGYVDGPEGQSLRVVERPVDLGADGKFLVSVAGDATEIFDETRSFDYYLGGTFAALG 180 G+R+GYV+GPE Q LR+VERPVDLG+DGKFLVSVAGDA+EIFDETRSFDYYLGGTF ALG Sbjct: 121 GIRIGYVEGPENQDLRMVERPVDLGSDGKFLVSVAGDASEIFDETRSFDYYLGGTFTALG 180 Query: 181 VVLLLTTVFQVRYGLAPLKRISDAIADIRSGRAERLEGRFPVEIAPLARETNALIDANRE 240 +VLLLTT+FQVRYGLAPLKRIS++IADIRSGRAERLEG FPVEIAPLARETNALIDANRE Sbjct: 181 IVLLLTTIFQVRYGLAPLKRISESIADIRSGRAERLEGEFPVEIAPLARETNALIDANRE 240 Query: 241 IVERSRTHVGNLAHAIKTPLSVIVNEAGAHAGDPFASKVLEQADLMRDQVAHHLERARIA 300 IVER+RTHVGNLAHAIKTPLSVIVNEA H+ DPFA+KV+EQAD+MRDQ+AHHLERARIA Sbjct: 241 IVERARTHVGNLAHAIKTPLSVIVNEAATHSADPFAAKVMEQADVMRDQLAHHLERARIA 300 Query: 301 ARATIVSTITDVAPVIEALRRTMEKIHRDRDLSIEAKADLAARFRGERQDLEEMVGNLVD 360 AR TIVST+T+VAP IEALRRTMEKI+R R + +E AD AARFRGERQDLEEMVGNLVD Sbjct: 301 ARVTIVSTVTEVAPAIEALRRTMEKIYRARSIVVETTADPAARFRGERQDLEEMVGNLVD 360 Query: 361 NACKWAASQVLVEVTVVPPEASGAGPRLRIVVDDDGRGLSEAERAQVSRRGQRLDESKPG 420 NACKWA S+V VEV+V PP +GA P LRI+VDDDGRGLS AERAQV RRGQRLDESKPG Sbjct: 361 NACKWATSRVAVEVSVEPPAQAGATPMLRIIVDDDGRGLSAAERAQVLRRGQRLDESKPG 420 Query: 421 SGLGLSIVTDLAGLYGGNLTLNNAPIGGLRAEIMLPAV 458 SGLGLSIV DLAGLYGG LTL++APIGGLRAE+ LP V Sbjct: 421 SGLGLSIVNDLAGLYGGRLTLDDAPIGGLRAELRLPGV 458 >ref|YP_001204779.1| putative two-component sensor histidine kinase [Bradyrhizobium sp. ORS 278] emb|CAL76542.1| Putative Two-component sensor histidine kinase [Bradyrhizobium sp. ORS 278] Length = 458 Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/458 (86%), Positives = 425/458 (92%) Query: 1 MGGSSLATRLFVSATAWVVVILAITGVILSSVYRDATERAFDRRLNLYLRTLIAEVATPD 60 M SSLATRLF+SATAW+VVILAITG++LSSVYR+ATERAFDRRLNLYLRTLIAEVATPD Sbjct: 1 MRQSSLATRLFLSATAWLVVILAITGIVLSSVYRNATERAFDRRLNLYLRTLIAEVATPD 60 Query: 61 EPADRQFQSLGEPLFDLPLSGWYWQITRTDTEKGETRASRSLWDKKLPKLEEHGAELTAA 120 +P DRQFQSLGEPLF+LPLSGWYWQITRTDTEK E RASRSLWDKKLPKLEE G ELTAA Sbjct: 61 DPPDRQFQSLGEPLFELPLSGWYWQITRTDTEKPEVRASRSLWDKKLPKLEEQGIELTAA 120 Query: 121 GVRLGYVDGPEGQSLRVVERPVDLGADGKFLVSVAGDATEIFDETRSFDYYLGGTFAALG 180 G+R+GYV+GPE Q LR+VERPVDLG+DGKFLVSVAGDA+EIFDETRSFDYYLGGTF ALG Sbjct: 121 GIRIGYVEGPENQDLRMVERPVDLGSDGKFLVSVAGDASEIFDETRSFDYYLGGTFTALG 180 Query: 181 VVLLLTTVFQVRYGLAPLKRISDAIADIRSGRAERLEGRFPVEIAPLARETNALIDANRE 240 +VLLLTT+FQVRYGLAPLKRIS++IADIRSGRAERLEG FPVEIAPLARETNALIDANRE Sbjct: 181 IVLLLTTIFQVRYGLAPLKRISESIADIRSGRAERLEGEFPVEIAPLARETNALIDANRE 240 Query: 241 IVERSRTHVGNLAHAIKTPLSVIVNEAGAHAGDPFASKVLEQADLMRDQVAHHLERARIA 300 IVER+RTHVGNLAHAIKTPLSVIVNEA HA DPFA+KV+EQAD+MRDQVAHHLERARIA Sbjct: 241 IVERARTHVGNLAHAIKTPLSVIVNEATTHAADPFAAKVMEQADVMRDQVAHHLERARIA 300 Query: 301 ARATIVSTITDVAPVIEALRRTMEKIHRDRDLSIEAKADLAARFRGERQDLEEMVGNLVD 360 AR TIVST+T+VAP IEALRRTMEKI+R+R +++EA AD AARFRGERQDLEEMVGNLVD Sbjct: 301 ARVTIVSTVTEVAPAIEALRRTMEKIYRNRGIAVEATADAAARFRGERQDLEEMVGNLVD 360 Query: 361 NACKWAASQVLVEVTVVPPEASGAGPRLRIVVDDDGRGLSEAERAQVSRRGQRLDESKPG 420 NACKWAAS+V VEV V PP SGA P LRIVVDDDGRGLS AERAQV RRGQRLDESKPG Sbjct: 361 NACKWAASRVSVEVAVEPPTQSGATPMLRIVVDDDGRGLSAAERAQVLRRGQRLDESKPG 420 Query: 421 SGLGLSIVTDLAGLYGGNLTLNNAPIGGLRAEIMLPAV 458 SGLGLSIVTDLA LYGG LTL +APIGGLRAE+ LP V Sbjct: 421 SGLGLSIVTDLAALYGGRLTLGDAPIGGLRAELRLPGV 458 >ref|YP_576716.1| periplasmic sensor signal transduction histidine kinase [Nitrobacter hamburgensis X14] gb|ABE62256.1| signal transduction histidine kinase [Nitrobacter hamburgensis X14] Length = 465 Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/455 (81%), Positives = 415/455 (91%), Gaps = 3/455 (0%) Query: 4 SSLATRLFVSATAWVVVILAITGVILSSVYRDATERAFDRRLNLYLRTLIAEVATPDEPA 63 +SLATRLF+SATAWVVVIL ITGV+LSSVYR A+ERAFDRRLNLYLRTLIAEVATPDEP Sbjct: 12 NSLATRLFLSATAWVVVILLITGVVLSSVYRSASERAFDRRLNLYLRTLIAEVATPDEPL 71 Query: 64 DRQFQSLGEPLFDLPLSGWYWQITRTDTEKGETRASRSLWDKKLPKLEEHGAELTAAGVR 123 DRQFQSLGEPLFDLPLSGWYW+I RTD EK E RASRSLWDKKLPKLE+ G EL+++GVR Sbjct: 72 DRQFQSLGEPLFDLPLSGWYWEIVRTDPEKKEIRASRSLWDKKLPKLEDQGIELSSSGVR 131 Query: 124 LGYVDGPEGQSLRVVERPVDLGADGKFLVSVAGDATEIFDETRSFDYYLGGTFAALGVVL 183 +GYVDGPEGQ+LR+VERPVDLG DGKF V+VAGDATEIFDETR+FDYYLGGTFAAL +VL Sbjct: 132 VGYVDGPEGQTLRMVERPVDLGTDGKFRVTVAGDATEIFDETRTFDYYLGGTFAALTIVL 191 Query: 184 LLTTVFQVRYGLAPLKRISDAIADIRSGRAERLEGRFPVEIAPLARETNALIDANREIVE 243 +LTT+FQVR+GLAPLKRISDAIADIRSGRAERLEG FPVEIAPLARETNALIDANREIVE Sbjct: 192 VLTTIFQVRFGLAPLKRISDAIADIRSGRAERLEGEFPVEIAPLARETNALIDANREIVE 251 Query: 244 RSRTHVGNLAHAIKTPLSVIVNEAGAHAGDPFASKVLEQADLMRDQVAHHLERARIAARA 303 R+RTHVGNLAHA+KTPLSVI+NEA A DPFA+KVLEQA++MR+QV HHLERARIAAR Sbjct: 252 RARTHVGNLAHAVKTPLSVIINEANARERDPFAAKVLEQAEVMRNQVVHHLERARIAARL 311 Query: 304 TIVSTITDVAPVIEALRRTMEKIHRDRDLSIEAKADLAARFRGERQDLEEMVGNLVDNAC 363 T+V+T+TDVAPVIEALRRTMEKIHRDR ++I A AA+FRGERQDLEEM GNLVDNAC Sbjct: 312 TVVATVTDVAPVIEALRRTMEKIHRDRAIAIAVDASTAAKFRGERQDLEEMAGNLVDNAC 371 Query: 364 KWAASQVLVEVTVVPPEASGAGP-RLRIVVDDDGRGLSEAERAQVSRRGQRLDESKPGSG 422 KWA S+VL++V+V P +GAGP L IVVDDDG GLS+AER Q S+RG+RLDE+KPGSG Sbjct: 372 KWARSRVLIKVSV--PPVAGAGPAMLHIVVDDDGSGLSDAERMQASQRGRRLDETKPGSG 429 Query: 423 LGLSIVTDLAGLYGGNLTLNNAPIGGLRAEIMLPA 457 LGLSIVTDLA LY G+LTL +APIGGLRAE++LPA Sbjct: 430 LGLSIVTDLAALYDGSLTLGSAPIGGLRAELVLPA 464 >ref|YP_780853.1| periplasmic sensor signal transduction histidine kinase [Rhodopseudomonas palustris BisA53] gb|ABJ05873.1| periplasmic sensor signal transduction histidine kinase [Rhodopseudomonas palustris BisA53] Length = 456 Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/458 (80%), Positives = 407/458 (88%), Gaps = 2/458 (0%) Query: 1 MGGSSLATRLFVSATAWVVVILAITGVILSSVYRDATERAFDRRLNLYLRTLIAEVATPD 60 M GSSLATRLF+SATAWVV+ILA+TG++LSSVYR A+ERAFDRRLNLYLRTL+AEVATPD Sbjct: 1 MRGSSLATRLFLSATAWVVIILALTGIVLSSVYRQASERAFDRRLNLYLRTLVAEVATPD 60 Query: 61 EPADRQFQSLGEPLFDLPLSGWYWQITRTDTEKGETRASRSLWDKKLPKLEEHGAELTAA 120 EP +RQFQSLGEPLFDLPLSGWYWQI RTDTEK E RASRSLWD+KL L++ G EL+AA Sbjct: 61 EPPERQFQSLGEPLFDLPLSGWYWQIARTDTEKPEARASRSLWDRKLSHLKDRGVELSAA 120 Query: 121 GVRLGYVDGPEGQSLRVVERPVDLGADGKFLVSVAGDATEIFDETRSFDYYLGGTFAALG 180 GVR GYVDGPEGQ+LR+VERPVDLGADGKFLV+VAGDATEIF+E R+FDYYL GTF AL Sbjct: 121 GVRQGYVDGPEGQNLRMVERPVDLGADGKFLVTVAGDATEIFEEIRTFDYYLAGTFLALS 180 Query: 181 VVLLLTTVFQVRYGLAPLKRISDAIADIRSGRAERLEGRFPVEIAPLARETNALIDANRE 240 + LLLTT+FQVR+GLAPLKRISDAIADIRSGRAERLEG FPVEIAPLARETNALIDAN + Sbjct: 181 IGLLLTTIFQVRFGLAPLKRISDAIADIRSGRAERLEGEFPVEIAPLARETNALIDANHQ 240 Query: 241 IVERSRTHVGNLAHAIKTPLSVIVNEAGAHAGDPFASKVLEQADLMRDQVAHHLERARIA 300 IVER+RTHVGNLAHA+KTPLSVI+NEA AH DPFA+KVLEQADLMRDQVAHHL+RARIA Sbjct: 241 IVERARTHVGNLAHALKTPLSVIINEANAHEADPFAAKVLEQADLMRDQVAHHLQRARIA 300 Query: 301 ARATIVSTITDVAPVIEALRRTMEKIHRDRDLSIEAKADLAARFRGERQDLEEMVGNLVD 360 AR +I+ TIT+VAPVI+ALRRTM KIHRDR L+I+ + D A+FRGERQDLEEMVGNLVD Sbjct: 301 ARVSIIGTITEVAPVIDALRRTMAKIHRDRGLAIDGEVDPVAKFRGERQDLEEMVGNLVD 360 Query: 361 NACKWAASQVLVEVTVVPPEASGAGPRLRIVVDDDGRGLSEAERAQVSRRGQRLDESKPG 420 NACKWAA +V + V + G LRI VDDDGRGL AERAQVSRRGQRLDESKPG Sbjct: 361 NACKWAAGRVFIGVDL--ERGGDPGSMLRITVDDDGRGLDPAERAQVSRRGQRLDESKPG 418 Query: 421 SGLGLSIVTDLAGLYGGNLTLNNAPIGGLRAEIMLPAV 458 SGLGLSIVTDLA LYGG+LTL APIGGLRAE+ LP V Sbjct: 419 SGLGLSIVTDLAALYGGSLTLGTAPIGGLRAELRLPGV 456