BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0070.0039.p (291 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767790.1| transcriptional regulator [Bradyrhizobium japon... 494 e-138 ref|YP_530635.1| LysR family transcriptional regulator [Rhodopse... 459 e-127 ref|YP_001208549.1| LysR family transcriptional regulator [Brady... 457 e-126 ref|YP_779669.1| LysR family transcriptional regulator [Rhodopse... 451 e-125 ref|YP_001236972.1| LysR family transcriptional regulator [Brady... 451 e-125 >ref|NP_767790.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC46415.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 301 Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust. Identities = 250/291 (85%), Positives = 265/291 (91%) Query: 1 METAMLDLELLRSFVSVVDAGGFTRAGERVHRTQSTVSQQIKRLEEDVGQPLLIRSGKDV 60 ME MLDLELLRSFVSVV+AGGFTRAGERVHRTQSTVSQQIKRLEEDVGQ LL R GKDV Sbjct: 11 MEAPMLDLELLRSFVSVVEAGGFTRAGERVHRTQSTVSQQIKRLEEDVGQVLLHRDGKDV 70 Query: 61 SPTEAGERLLTYARRLLSLAEEARDVLSRPGSEGAIRIGITEDFAAYRLTKLLATFARSH 120 PTEAGERLL+YARRLLSLAEEARDVLS+P SEGAIR+GI EDFAAYRL KLLATF+RSH Sbjct: 71 RPTEAGERLLSYARRLLSLAEEARDVLSQPDSEGAIRLGIPEDFAAYRLAKLLATFSRSH 130 Query: 121 PNLRLDVRSGQSLFLYRDLERGELDLALIKRAANEKGGIAVWPERVHWVTSKSHPRDTTA 180 P LRLDVR+ QS L RDLERGELDLAL KR A EKG IAVWPERVHWVTSKSHP D A Sbjct: 131 PGLRLDVRADQSKNLARDLERGELDLALYKREAGEKGAIAVWPERVHWVTSKSHPIDAGA 190 Query: 181 GSVPLIGFASGCLYRARAIHALESAGRNWHMAYTSSSLAGIQAAVAAGLGLSILSEMSIQ 240 SVPLIGF GCLYRA AIHALESAGR WHMAYTSSSLAGIQAAVAAG+GLSILSEMSIQ Sbjct: 191 PSVPLIGFPLGCLYRAGAIHALESAGRIWHMAYTSSSLAGIQAAVAAGMGLSILSEMSIQ 250 Query: 241 AEHRVLTAKDGFAPIDRTEVALVAAPEASPATLRLADRLAEYCESVQAKAA 291 A+HRVLTAKDGFAPI++TEVAL+AAP+ASPATLRLADRLAE+C++VQAKAA Sbjct: 251 ADHRVLTAKDGFAPINKTEVALMAAPDASPATLRLADRLAEFCDNVQAKAA 301 >ref|YP_530635.1| LysR family transcriptional regulator [Rhodopseudomonas palustris BisB18] gb|ABD86316.1| transcriptional regulator, LysR family [Rhodopseudomonas palustris BisB18] Length = 287 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 224/287 (78%), Positives = 258/287 (89%) Query: 5 MLDLELLRSFVSVVDAGGFTRAGERVHRTQSTVSQQIKRLEEDVGQPLLIRSGKDVSPTE 64 MLDLELLRSFV+VVDAGGFTRAG RVHRTQSTVSQQIKRLE+D+GQ LL R+GKDV+PTE Sbjct: 1 MLDLELLRSFVAVVDAGGFTRAGARVHRTQSTVSQQIKRLEDDLGQALLNRTGKDVTPTE 60 Query: 65 AGERLLTYARRLLSLAEEARDVLSRPGSEGAIRIGITEDFAAYRLTKLLATFARSHPNLR 124 +GERLL+YARRLLSLAEEARDV++RP EGA+R+GI EDFAAYRLTKLLA+FARS P LR Sbjct: 61 SGERLLSYARRLLSLAEEARDVVARPNGEGAVRLGIPEDFAAYRLTKLLASFARSRPGLR 120 Query: 125 LDVRSGQSLFLYRDLERGELDLALIKRAANEKGGIAVWPERVHWVTSKSHPRDTTAGSVP 184 LDVR+ QS+ L RDLERG+LDLAL+KRAA + IAVWPER+HW+TS SHP D A S+P Sbjct: 121 LDVRAAQSVDLKRDLERGDLDLALLKRAAEGRDAIAVWPERLHWITSGSHPCDANAASLP 180 Query: 185 LIGFASGCLYRARAIHALESAGRNWHMAYTSSSLAGIQAAVAAGLGLSILSEMSIQAEHR 244 LI F +GCLYRARAIHA+ESAGR WHMAY S++LAGIQAAVAAGLGLSIL ++IQ +HR Sbjct: 181 LIFFPTGCLYRARAIHAIESAGRRWHMAYCSANLAGIQAAVAAGLGLSILPAIAIQPDHR 240 Query: 245 VLTAKDGFAPIDRTEVALVAAPEASPATLRLADRLAEYCESVQAKAA 291 LTAKDGFAPID TE+ALVA+P+ASPATLRLADRLAE+C+++QAKAA Sbjct: 241 RLTAKDGFAPIDSTELALVASPDASPATLRLADRLAEFCDAIQAKAA 287 >ref|YP_001208549.1| LysR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL80334.1| putative transcriptional regulatory protein, LysR family [Bradyrhizobium sp. ORS 278] Length = 288 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 222/288 (77%), Positives = 261/288 (90%), Gaps = 1/288 (0%) Query: 5 MLDLELLRSFVSVVDAGGFTRAGERVHRTQSTVSQQIKRLEEDVGQPLLIRSGKDVSPTE 64 MLDLELLRSFVSVV+AGGFTRAGERVHRTQSTVSQQI+RLEED+GQ LL R G++V+PTE Sbjct: 1 MLDLELLRSFVSVVEAGGFTRAGERVHRTQSTVSQQIRRLEEDLGQTLLNRDGREVTPTE 60 Query: 65 AGERLLTYARRLLSLAEEARDVLSRPGSEGAIRIGITEDFAAYRLTKLLATFARSHPNLR 124 AGERLL+YARRLL+LAEEARDV++RPG GA+++GI EDFAAYRL KLLA F+R+HP+LR Sbjct: 61 AGERLLSYARRLLTLAEEARDVVARPGPAGAVKLGIPEDFAAYRLAKLLAAFSRAHPDLR 120 Query: 125 LDVRSGQSLFLYRDLERGELDLALIKRAANE-KGGIAVWPERVHWVTSKSHPRDTTAGSV 183 LDVR+ QSL L RD+ERG+LDLAL+KR A++ + IA WPE+V+WV S+SHP D A S+ Sbjct: 121 LDVRADQSLNLKRDIERGDLDLALLKRGADDTRAAIAAWPEQVYWVASRSHPIDLDARSL 180 Query: 184 PLIGFASGCLYRARAIHALESAGRNWHMAYTSSSLAGIQAAVAAGLGLSILSEMSIQAEH 243 PLIGF GC+YR RA+HALESAGR WHMAYTSSSLAGIQAAVAAG+GLSILSEMS+QA+H Sbjct: 181 PLIGFPLGCIYRTRAVHALESAGRAWHMAYTSSSLAGIQAAVAAGMGLSILSEMSVQADH 240 Query: 244 RVLTAKDGFAPIDRTEVALVAAPEASPATLRLADRLAEYCESVQAKAA 291 RVLTA++GFAPIDRTEVAL+A+P ASPATLRLA+RLAE+C+ VQAKAA Sbjct: 241 RVLTAREGFAPIDRTEVALLASPNASPATLRLANRLAEFCDKVQAKAA 288 >ref|YP_779669.1| LysR family transcriptional regulator [Rhodopseudomonas palustris BisA53] gb|ABJ04689.1| transcriptional regulator, LysR family [Rhodopseudomonas palustris BisA53] Length = 305 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/291 (75%), Positives = 255/291 (87%) Query: 1 METAMLDLELLRSFVSVVDAGGFTRAGERVHRTQSTVSQQIKRLEEDVGQPLLIRSGKDV 60 M AMLDL+LLRSFVSVVD+GGFTRAGERVHRTQSTVSQQIKRLE+D+GQ LL R GK V Sbjct: 15 MTKAMLDLDLLRSFVSVVDSGGFTRAGERVHRTQSTVSQQIKRLEDDLGQQLLNRDGKTV 74 Query: 61 SPTEAGERLLTYARRLLSLAEEARDVLSRPGSEGAIRIGITEDFAAYRLTKLLATFARSH 120 +PTEAGERLL+YARRLLSLAEEARDV++RP +GA+R+GI EDFAAYRLT+LLA F+R+ Sbjct: 75 TPTEAGERLLSYARRLLSLAEEARDVVARPHQDGAVRLGIPEDFAAYRLTRLLARFSRAR 134 Query: 121 PNLRLDVRSGQSLFLYRDLERGELDLALIKRAANEKGGIAVWPERVHWVTSKSHPRDTTA 180 P LRLDVR+ QSL L RD+ERG+LDLAL+KR A + IAVWPERVHWV S++HP + A Sbjct: 135 PGLRLDVRADQSLNLTRDIERGDLDLALLKREAGGRSAIAVWPERVHWVNSRNHPCNAKA 194 Query: 181 GSVPLIGFASGCLYRARAIHALESAGRNWHMAYTSSSLAGIQAAVAAGLGLSILSEMSIQ 240 SVPLI F SGCLYR+RAIHA+E+AGR WH+AY+SSSLAGIQAAVAAGLGLSILS+MSI Sbjct: 195 DSVPLIFFPSGCLYRSRAIHAIEAAGRRWHLAYSSSSLAGIQAAVAAGLGLSILSDMSIG 254 Query: 241 AEHRVLTAKDGFAPIDRTEVALVAAPEASPATLRLADRLAEYCESVQAKAA 291 +H LTA+DGF PID TE+ALVAAPEASPATLRLAD+LAE+C+ V AKAA Sbjct: 255 TDHHKLTARDGFPPIDNTELALVAAPEASPATLRLADKLAEFCDEVNAKAA 305 >ref|YP_001236972.1| LysR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ33066.1| transcriptional regulator, LysR family [Bradyrhizobium sp. BTAi1] Length = 288 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 227/288 (78%), Positives = 262/288 (90%), Gaps = 1/288 (0%) Query: 5 MLDLELLRSFVSVVDAGGFTRAGERVHRTQSTVSQQIKRLEEDVGQPLLIRSGKDVSPTE 64 MLDLELLRSFVSVVDAGGFTRAGERVHRTQSTVSQQI+RLEED+GQ LL R G+ V+PTE Sbjct: 1 MLDLELLRSFVSVVDAGGFTRAGERVHRTQSTVSQQIRRLEEDLGQTLLNRDGRAVTPTE 60 Query: 65 AGERLLTYARRLLSLAEEARDVLSRPGSEGAIRIGITEDFAAYRLTKLLATFARSHPNLR 124 AGERLL+YARRLL+LAEEARDV++RPG +GA+++GI EDFAAYRL KLLA F+R+HPNLR Sbjct: 61 AGERLLSYARRLLALAEEARDVVARPGPDGAVKLGIPEDFAAYRLAKLLAAFSRAHPNLR 120 Query: 125 LDVRSGQSLFLYRDLERGELDLALIKRAANE-KGGIAVWPERVHWVTSKSHPRDTTAGSV 183 LDVR+ QSL L RD+ERGELDLAL+KR ++ + IA WPE+VHWVTSKSHP + +GS+ Sbjct: 121 LDVRADQSLNLKRDIERGELDLALLKRGVDDTRAAIAAWPEQVHWVTSKSHPVNLDSGSL 180 Query: 184 PLIGFASGCLYRARAIHALESAGRNWHMAYTSSSLAGIQAAVAAGLGLSILSEMSIQAEH 243 PLIGF GC+YR RAIHALESAGR WHMAYTSSSLA IQAAVAAG+GLSILSEMS+Q++H Sbjct: 181 PLIGFPLGCIYRTRAIHALESAGRAWHMAYTSSSLAAIQAAVAAGMGLSILSEMSVQSDH 240 Query: 244 RVLTAKDGFAPIDRTEVALVAAPEASPATLRLADRLAEYCESVQAKAA 291 RVLTA++GFAPIDRTEVALVA+P+ASPATLRLADRLAE+C+ VQAKAA Sbjct: 241 RVLTAREGFAPIDRTEVALVASPDASPATLRLADRLAEFCDKVQAKAA 288