BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0070.0038.p (307 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_575603.1| hypothetical protein Nham_0243 [Nitrobacter ham... 449 e-124 ref|NP_767791.1| hypothetical protein blr1151 [Bradyrhizobium ja... 446 e-123 ref|YP_001208548.1| DMT family permease [Bradyrhizobium sp. ORS ... 431 e-119 ref|YP_530634.1| hypothetical protein RPC_0744 [Rhodopseudomonas... 430 e-118 ref|YP_779670.1| hypothetical protein RPE_0733 [Rhodopseudomonas... 424 e-116 >ref|YP_575603.1| hypothetical protein Nham_0243 [Nitrobacter hamburgensis X14] gb|ABE61143.1| protein of unknown function DUF6, transmembrane [Nitrobacter hamburgensis X14] Length = 312 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 231/291 (79%), Positives = 260/291 (89%) Query: 14 FNTLPLLIALFCLLWSYAFVAGKIGVTDCPPLILLAARFSLAGVLILAISWLRRDQWDLS 73 FNTLPL I FCLLWS+AFVAGK+GVTDCPPLILLAARF LAG+LI I+ LR + W LS Sbjct: 19 FNTLPLAIGAFCLLWSFAFVAGKVGVTDCPPLILLAARFLLAGILIFGIAVLRGEGWSLS 78 Query: 74 WRDAAVFAVLGVANNALYLGLGYTGLKTVSAGLGALIVSANPVFTAMLAALFLGESMTLR 133 RD A+FAVLGVANNA+YLGLGYTGL+TVSAGL LIVSANPVFTA+LAA+FLGES+T R Sbjct: 79 RRDVAIFAVLGVANNAMYLGLGYTGLQTVSAGLSGLIVSANPVFTAVLAAVFLGESLTWR 138 Query: 134 KVIGLVLGIVGVALIVWHRMSVGSDSPHGILFTLASLASIVAGTVLFKLLAPKGSLWIGN 193 KV+GL+LGI GVA IVWHRMSVG+DS HGILFTLASLASIVAGT+LFK+LAPKG+LW+GN Sbjct: 139 KVMGLLLGIAGVAFIVWHRMSVGTDSLHGILFTLASLASIVAGTILFKVLAPKGNLWLGN 198 Query: 194 GIQNIAGGLAVMPFAFTLSSVSDIVPSIRLAGAFTFLVLGGSILAYLLWFHLLKVCGATA 253 G+Q++AGGLA++PFA LS VSDIVPS RL AF +LVL GSILAY+LWFHLLKVCGATA Sbjct: 199 GVQSLAGGLALLPFASALSDVSDIVPSWRLLAAFVYLVLCGSILAYVLWFHLLKVCGATA 258 Query: 254 ASAYHFLMPPLGMLFAYLVLGEHVEFRDLLGIVPVALGIYLVTRPAAPTSR 304 ASAYHFLMPPL +LFA+LVLGEHV RDLLGIVPVALGIYLVTRPAA ++ Sbjct: 259 ASAYHFLMPPLAILFAWLVLGEHVAARDLLGIVPVALGIYLVTRPAAGPAQ 309 >ref|NP_767791.1| hypothetical protein blr1151 [Bradyrhizobium japonicum USDA 110] dbj|BAC46416.1| blr1151 [Bradyrhizobium japonicum USDA 110] Length = 313 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 237/308 (76%), Positives = 262/308 (85%), Gaps = 4/308 (1%) Query: 1 MSAATSMAAPRARFNTLPLLIALFCLLWSYAFVAGKIGVTDCPPLILLAARFSLAGVLIL 60 MS A S+ PR+RFNTLPL I LFCLLWSYAFVAGKIGVT CPPLILLAARFSLAG+LIL Sbjct: 1 MSLAPSIPVPRSRFNTLPLAIGLFCLLWSYAFVAGKIGVTHCPPLILLAARFSLAGILIL 60 Query: 61 AISWLRRDQWDLSWRDAAVFAVLGVANNALYLGLGYTGLKTVSAGLGALIVSANPVFTAM 120 + +R D W LSWRDAA+FAVLG+ANNALYLGLGYTGL++VSAGLG LIVSANPVFTA Sbjct: 61 GATLIRGDSWSLSWRDAAIFAVLGIANNALYLGLGYTGLQSVSAGLGGLIVSANPVFTAA 120 Query: 121 LAALFLGESMTLRKVIGLVLGIVGVALIVWHRMSVGSDSPHGILFTLASLASIVAGTVLF 180 LAAL LGE MT RK GL+LG++GV IVWHR+SVG+DS HGI+FTLASLASIV GT+LF Sbjct: 121 LAALLLGEGMTWRKAGGLLLGVIGVTAIVWHRLSVGTDSWHGIVFTLASLASIVLGTILF 180 Query: 181 KLLAPKGSLWIGNGIQNIAGGLAVMPFAFTLSSVS--DIVPSIRLAGAFTFLVLGGSILA 238 KLLAPKGSLWIGNG+QN+A G+ + P A T + V D+ PS L GAF FLVLGGSILA Sbjct: 181 KLLAPKGSLWIGNGVQNLAAGIVLTPVALTFADVHAIDVTPS--LIGAFAFLVLGGSILA 238 Query: 239 YLLWFHLLKVCGATAASAYHFLMPPLGMLFAYLVLGEHVEFRDLLGIVPVALGIYLVTRP 298 Y LWFHLLKVCGATAASAYHFLMPPLGMLFA+LVLGEHVE RDLLGI+PVALGIYLVTRP Sbjct: 239 YWLWFHLLKVCGATAASAYHFLMPPLGMLFAFLVLGEHVEARDLLGIIPVALGIYLVTRP 298 Query: 299 AAPTSRSM 306 A S + Sbjct: 299 AKSLSSKL 306 >ref|YP_001208548.1| DMT family permease [Bradyrhizobium sp. ORS 278] emb|CAL80333.1| putative permeases of the drug/metabolite transporter (DMT) superfamily [Bradyrhizobium sp. ORS 278] Length = 305 Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust. Identities = 222/306 (72%), Positives = 261/306 (85%), Gaps = 2/306 (0%) Query: 1 MSAATSMAA-PRARFNTLPLLIALFCLLWSYAFVAGKIGVTDCPPLILLAARFSLAGVLI 59 MS+ +S AA + + LPL I LFCLLWS+AFVAGKIGVT CPPL+LLAARFSLAG+LI Sbjct: 1 MSSVSSPAAVTPMKTSLLPLQIGLFCLLWSFAFVAGKIGVTYCPPLLLLAARFSLAGLLI 60 Query: 60 LAISWLRRDQWDLSWRDAAVFAVLGVANNALYLGLGYTGLKTVSAGLGALIVSANPVFTA 119 LA+ +R +W +SWRDAAVFA++G+ANNALYLGLGYTGL+TVSAGLG LIVSANPVFTA Sbjct: 61 LAVPAVR-GEWRMSWRDAAVFAIIGIANNALYLGLGYTGLQTVSAGLGGLIVSANPVFTA 119 Query: 120 MLAALFLGESMTLRKVIGLVLGIVGVALIVWHRMSVGSDSPHGILFTLASLASIVAGTVL 179 + AAL LGE +TLRKV GL LG +GVA+IVWHRMSVG+D GIL+TLA+LASIV GT+L Sbjct: 120 VFAALLLGEPLTLRKVAGLALGTLGVAMIVWHRMSVGTDHLQGILYTLAALASIVTGTIL 179 Query: 180 FKLLAPKGSLWIGNGIQNIAGGLAVMPFAFTLSSVSDIVPSIRLAGAFTFLVLGGSILAY 239 FK LAPKGSLW+GNGIQN++ GL + P AF +SSV D+VP+ +L GAF FLVLGGSILAY Sbjct: 180 FKQLAPKGSLWVGNGIQNLSAGLVLWPVAFGISSVHDVVPNAQLIGAFAFLVLGGSILAY 239 Query: 240 LLWFHLLKVCGATAASAYHFLMPPLGMLFAYLVLGEHVEFRDLLGIVPVALGIYLVTRPA 299 +LWFHLLKVCGATAASAYHF+MPPL M+FA+LVLGEHV +DLLG++PVA+GIYLVTR Sbjct: 240 VLWFHLLKVCGATAASAYHFVMPPLAMVFAFLVLGEHVALQDLLGVIPVAIGIYLVTRAP 299 Query: 300 APTSRS 305 A T S Sbjct: 300 AQTRAS 305 >ref|YP_530634.1| hypothetical protein RPC_0744 [Rhodopseudomonas palustris BisB18] gb|ABD86315.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas palustris BisB18] Length = 312 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 223/300 (74%), Positives = 254/300 (84%) Query: 1 MSAATSMAAPRARFNTLPLLIALFCLLWSYAFVAGKIGVTDCPPLILLAARFSLAGVLIL 60 MS A + R R LPL+IA FC+LWS+AFVAGK+ VTDCPPLILLAARFSLAG+LIL Sbjct: 1 MSLAPPLDVSRPRLVPLPLIIAAFCVLWSFAFVAGKVAVTDCPPLILLAARFSLAGILIL 60 Query: 61 AISWLRRDQWDLSWRDAAVFAVLGVANNALYLGLGYTGLKTVSAGLGALIVSANPVFTAM 120 S LR + W LSWRD AV AVLG+ANNALYLGLGYTGL+ SAGLG LIVS+NPVFTA+ Sbjct: 61 GFSLLRGEAWTLSWRDVAVCAVLGIANNALYLGLGYTGLQNTSAGLGGLIVSSNPVFTAV 120 Query: 121 LAALFLGESMTLRKVIGLVLGIVGVALIVWHRMSVGSDSPHGILFTLASLASIVAGTVLF 180 LAAL L E +T RKV GL+LGIVGV IV HRM++G+DS GILFT A+LASIV+GT+LF Sbjct: 121 LAALLLNEPLTWRKVAGLLLGIVGVGFIVSHRMAIGTDSLRGILFTFAALASIVSGTILF 180 Query: 181 KLLAPKGSLWIGNGIQNIAGGLAVMPFAFTLSSVSDIVPSIRLAGAFTFLVLGGSILAYL 240 KLLAPKGSLWIGNGIQNIAGGL ++PFA TL++V DIVPS RL AF FLVLGGSI AY Sbjct: 181 KLLAPKGSLWIGNGIQNIAGGLVLIPFAATLANVGDIVPSARLFWAFGFLVLGGSIFAYF 240 Query: 241 LWFHLLKVCGATAASAYHFLMPPLGMLFAYLVLGEHVEFRDLLGIVPVALGIYLVTRPAA 300 LWFHLL VCGA+AASA+HF+MPPL MLFA++VLGEH++ RDLLGI+PVALGIYLVTRPAA Sbjct: 241 LWFHLLHVCGASAASAWHFVMPPLAMLFAWIVLGEHLDARDLLGIIPVALGIYLVTRPAA 300 >ref|YP_779670.1| hypothetical protein RPE_0733 [Rhodopseudomonas palustris BisA53] gb|ABJ04690.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas palustris BisA53] Length = 308 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 221/295 (74%), Positives = 251/295 (85%), Gaps = 3/295 (1%) Query: 3 AATSMAAPRARFNTLPLLIALFCLLWSYAFVAGKIGVTDCPPLILLAARFSLAGVLILAI 62 +A S A PR N LPL IALFC+LWS+AFVAGK+ VTDCPPLILLAARFSLAG+LIL Sbjct: 2 SAPSTAGPR---NWLPLAIALFCVLWSFAFVAGKVAVTDCPPLILLAARFSLAGILILGF 58 Query: 63 SWLRRDQWDLSWRDAAVFAVLGVANNALYLGLGYTGLKTVSAGLGALIVSANPVFTAMLA 122 S LR + + LSWRD AV AVLGVANNALYLGLGYTGL+ SAGLG LIVSANPV TA+LA Sbjct: 59 SALRGEAFALSWRDVAVCAVLGVANNALYLGLGYTGLQETSAGLGGLIVSANPVITAVLA 118 Query: 123 ALFLGESMTLRKVIGLVLGIVGVALIVWHRMSVGSDSPHGILFTLASLASIVAGTVLFKL 182 AL L E +T RKV+GL+LG+VGVA +VWHRM +G+DS GILFT A+LASIV GT+LFKL Sbjct: 119 ALLLNEPLTWRKVLGLLLGMVGVAFVVWHRMEIGTDSLRGILFTFAALASIVGGTILFKL 178 Query: 183 LAPKGSLWIGNGIQNIAGGLAVMPFAFTLSSVSDIVPSIRLAGAFTFLVLGGSILAYLLW 242 L+P+GSLWIGNGIQN+A GL ++PFA TL+ V DIVPS RLA AF FLVLGGSI AY LW Sbjct: 179 LSPQGSLWIGNGIQNLAAGLVLIPFAATLADVGDIVPSTRLAFAFGFLVLGGSIFAYFLW 238 Query: 243 FHLLKVCGATAASAYHFLMPPLGMLFAYLVLGEHVEFRDLLGIVPVALGIYLVTR 297 FHLL VCGATAASA+HF+MPPL MLFA+LVLGEH++ RDL+GIVPVALGIYLVTR Sbjct: 239 FHLLTVCGATAASAWHFVMPPLAMLFAWLVLGEHLDARDLIGIVPVALGIYLVTR 293