BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0070.0029.p (1400 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772049.1| DNA-directed RNA polymerase subunit beta' [Brad... 2745 0.0 ref|YP_001205095.1| DNA-directed RNA polymerase subunit beta' [B... 2728 0.0 ref|YP_001240986.1| DNA-directed RNA polymerase subunit beta' [B... 2724 0.0 ref|YP_002288658.1| DNA-directed RNA polymerase, beta' subunit [... 2680 0.0 ref|YP_576814.1| DNA-directed RNA polymerase subunit beta' [Nitr... 2678 0.0 >ref|NP_772049.1| DNA-directed RNA polymerase subunit beta' [Bradyrhizobium japonicum USDA 110] sp|Q89J75.1|RPOC_BRAJA RecName: Full=DNA-directed RNA polymerase subunit beta'; Short=RNAP subunit beta'; AltName: Full=RNA polymerase subunit beta'; AltName: Full=Transcriptase subunit beta' dbj|BAC50674.1| DNA-directed RNA polymerase beta' chain [Bradyrhizobium japonicum USDA 110] Length = 1398 Score = 2745 bits (7116), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1333/1400 (95%), Positives = 1368/1400 (97%), Gaps = 2/1400 (0%) Query: 1 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 60 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA Sbjct: 1 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 60 Query: 61 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS 120 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS Sbjct: 61 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS 120 Query: 121 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA 180 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA Sbjct: 121 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA 180 Query: 181 MIGAEAIRELLKGLELEKLEATLRADMAETDSDIKHKKLAKRLKIVEAFRVSGNKPEWMI 240 MIGAEAIRELLKG++LEKLEA+LR +M ETDSDIKHKKLAKRLKIVEAFR SGNKPEWMI Sbjct: 181 MIGAEAIRELLKGMDLEKLEASLRVEMQETDSDIKHKKLAKRLKIVEAFRHSGNKPEWMI 240 Query: 241 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM 300 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM Sbjct: 241 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM 300 Query: 301 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG 360 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG Sbjct: 301 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG 360 Query: 361 PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE 420 PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE Sbjct: 361 PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE 420 Query: 421 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL 480 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL Sbjct: 421 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL 480 Query: 481 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKIFGDMAELEHALH 540 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKIFGDMAELEHALH Sbjct: 481 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKIFGDMAELEHALH 540 Query: 541 SKVIHLHTKIKYRWEGLDEEGKQSKRWIETTAGRVMLGNLLPKNPKISYDIINKLMTKRE 600 +KVIHLHTKIKYRW+G+DE GK S RWIETTAGRVMLGNLLPKNP+ISY+IINKLMTKRE Sbjct: 541 AKVIHLHTKIKYRWQGMDETGKVSTRWIETTAGRVMLGNLLPKNPRISYEIINKLMTKRE 600 Query: 601 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPASKWKIVDQTRTL 660 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVP KWKIVD TRTL Sbjct: 601 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHGKWKIVDTTRTL 660 Query: 661 AKDFEQQYNDGLITHGEKYNKVVDAWSKAGEEVAKAMMKEISSTKKTAAGADADINSIYM 720 AKDFEQQYNDGLITHGEKYNKVVDAWSKA EE+AKAMMKEIS+TKKTA+GADADINSIYM Sbjct: 661 AKDFEQQYNDGLITHGEKYNKVVDAWSKATEEIAKAMMKEISATKKTASGADADINSIYM 720 Query: 721 MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA 780 MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA Sbjct: 721 MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA 780 Query: 781 DTALKTANSGYLTRRLVDVAQDCIITQTDCGTTLGIKMRAIVDAGTVVASLGSRILGRVA 840 DTALKTANSGYLTRRLVDVAQDCIITQ DCGT LGIKMRAIVDAGTVVASLGSRILGR A Sbjct: 781 DTALKTANSGYLTRRLVDVAQDCIITQDDCGTKLGIKMRAIVDAGTVVASLGSRILGRTA 840 Query: 841 CDDVRDPATNEVIIKRDTLMEESHVDAIQQAGIQEVKIRSALTCELINGICAKCYGRDLA 900 C+DVRD ++ +VIIKR TLMEESH+DAI Q G+QEVKIRSALTCEL+NGIC KCYGRDLA Sbjct: 841 CEDVRD-SSGKVIIKRGTLMEESHLDAIHQGGVQEVKIRSALTCELVNGICGKCYGRDLA 899 Query: 901 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNFDGKIVIRNKAI 960 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNFDGKIVIRNKAI Sbjct: 900 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNFDGKIVIRNKAI 959 Query: 961 ARNSEGSLVAMVRNMVVAIVDADGTERATHRIQYGSKMHVDEGDMVKRGQRIAEWDPYTR 1020 ARNSEG L+AMVRNMVVAIVDADGTERATHRIQYGS++HVDEGD VKRGQRI EWDPYTR Sbjct: 960 ARNSEGHLIAMVRNMVVAIVDADGTERATHRIQYGSRLHVDEGDTVKRGQRIVEWDPYTR 1019 Query: 1021 PVLSEVEGTIGFEDLVEGQSISETLDESTGIAKRVVIDWRTTRGGSDLRPAIVVKGKDGK 1080 P+L+EVEGTIGFEDLVEGQSISETLDE+TGIAKRVVIDWR+TRGGSDLRPAIVVKGKDGK Sbjct: 1020 PLLTEVEGTIGFEDLVEGQSISETLDEATGIAKRVVIDWRSTRGGSDLRPAIVVKGKDGK 1079 Query: 1081 VMKLARGGDARYMLSVDAILSVDIGGKVMPGDILARISTESAKTRDITGGLPRVAELFEA 1140 V+KLARGGDARYMLSVDAILSVDIG KV PGDILAR+STESAKTRDITGGLPRVAELFEA Sbjct: 1080 VLKLARGGDARYMLSVDAILSVDIGAKVAPGDILARVSTESAKTRDITGGLPRVAELFEA 1139 Query: 1141 RKPKDAAIIAETAGTIRFGRDYKNKRRISIEPMDKTEEPREYLIPKGKHIHLQDGDIVEK 1200 R+PKDAAIIAE AGTIRFGRDYKNKRRISIEPMDKT+EPREYLIPKGKHIHLQDGD+VEK Sbjct: 1140 RRPKDAAIIAEIAGTIRFGRDYKNKRRISIEPMDKTDEPREYLIPKGKHIHLQDGDVVEK 1199 Query: 1201 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV 1260 GDFIVEGNPAPHDILA+KGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV Sbjct: 1200 GDFIVEGNPAPHDILAVKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV 1259 Query: 1261 TDQGDTDMISGEQVDKIEFDALNTKAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQ 1320 TDQGDTDMISGEQVDKIEFDALN KAKEEGKK ATGTPVLLGITKASLQTRSFFSAASFQ Sbjct: 1260 TDQGDTDMISGEQVDKIEFDALNEKAKEEGKKIATGTPVLLGITKASLQTRSFFSAASFQ 1319 Query: 1321 ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMARIREVAVKRDKLILDEREKQ 1380 ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMA+IREVA+KRDKLILDEREK Sbjct: 1320 ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAMKRDKLILDEREK- 1378 Query: 1381 QAAIVPTAPEAEPLALPPAE 1400 QAA+V APEAE ALPPAE Sbjct: 1379 QAAVVSPAPEAELPALPPAE 1398 >ref|YP_001205095.1| DNA-directed RNA polymerase subunit beta' [Bradyrhizobium sp. ORS 278] sp|A4YSI2.1|RPOC_BRASO RecName: Full=DNA-directed RNA polymerase subunit beta'; Short=RNAP subunit beta'; AltName: Full=RNA polymerase subunit beta'; AltName: Full=Transcriptase subunit beta' emb|CAL76858.1| RNA polymerase, beta prime subunit [Bradyrhizobium sp. ORS 278] Length = 1399 Score = 2728 bits (7072), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1316/1400 (94%), Positives = 1362/1400 (97%), Gaps = 1/1400 (0%) Query: 1 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 60 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA Sbjct: 1 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 60 Query: 61 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS 120 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS Sbjct: 61 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS 120 Query: 121 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA 180 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA Sbjct: 121 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA 180 Query: 181 MIGAEAIRELLKGLELEKLEATLRADMAETDSDIKHKKLAKRLKIVEAFRVSGNKPEWMI 240 MIGAEAIRELL+GLELEKLE TLRA+M ETDSDIKHKKLAKRLKIVEAFR SGNKPEWMI Sbjct: 181 MIGAEAIRELLRGLELEKLEQTLRAEMQETDSDIKHKKLAKRLKIVEAFRHSGNKPEWMI 240 Query: 241 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM 300 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM Sbjct: 241 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM 300 Query: 301 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG 360 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG Sbjct: 301 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG 360 Query: 361 PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE 420 PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE Sbjct: 361 PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE 420 Query: 421 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL 480 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVC+AFNADFDGDQMAVHVPLSLEAQL Sbjct: 421 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQL 480 Query: 481 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKIFGDMAELEHALH 540 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREG+PG+G FG+MAELEHALH Sbjct: 481 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGMPGQGMTFGNMAELEHALH 540 Query: 541 SKVIHLHTKIKYRWEGLDEEGKQSKRWIETTAGRVMLGNLLPKNPKISYDIINKLMTKRE 600 +K IHLH+KIKYRWEG++EEGK +KRWIETTAGRVMLGNLLPK+P++++++INKLMTKRE Sbjct: 541 AKAIHLHSKIKYRWEGMNEEGKIAKRWIETTAGRVMLGNLLPKHPRVTFEVINKLMTKRE 600 Query: 601 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPASKWKIVDQTRTL 660 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPA KWKIVD TRTL Sbjct: 601 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPAGKWKIVDTTRTL 660 Query: 661 AKDFEQQYNDGLITHGEKYNKVVDAWSKAGEEVAKAMMKEISSTKKTAAGADADINSIYM 720 AKDFEQQYNDGLITHGEKYNKVVDAWSKA EE+AK MMKEIS TKKTA GADADINSIYM Sbjct: 661 AKDFEQQYNDGLITHGEKYNKVVDAWSKASEEIAKEMMKEISVTKKTATGADADINSIYM 720 Query: 721 MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA 780 M+HSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA Sbjct: 721 MSHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA 780 Query: 781 DTALKTANSGYLTRRLVDVAQDCIITQTDCGTTLGIKMRAIVDAGTVVASLGSRILGRVA 840 DTALKTANSGYLTRRLVDVAQDCIITQ DCGT LGIKMRAIVDAGT+VASLGSRILGRV Sbjct: 781 DTALKTANSGYLTRRLVDVAQDCIITQDDCGTHLGIKMRAIVDAGTLVASLGSRILGRVP 840 Query: 841 CDDVRDPATNEVIIKRDTLMEESHVDAIQQAGIQEVKIRSALTCELINGICAKCYGRDLA 900 CDDVRDPATN V++K TLMEESH+DAIQQAG+QEVKIRSALTCEL+NGIC CYGRDLA Sbjct: 841 CDDVRDPATNAVLVKAGTLMEESHIDAIQQAGVQEVKIRSALTCELVNGICKMCYGRDLA 900 Query: 901 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNFDGKIVIRNKAI 960 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNF+GK+VIRNKAI Sbjct: 901 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNFEGKVVIRNKAI 960 Query: 961 ARNSEGSLVAMVRNMVVAIVDADGTERATHRIQYGSKMHVDEGDMVKRGQRIAEWDPYTR 1020 ARNSEG L+AMVRNMVV IVD DGTERATHRIQYGS+MHVD+GDM+KRGQRIAEWDPYTR Sbjct: 961 ARNSEGHLIAMVRNMVVTIVDPDGTERATHRIQYGSRMHVDDGDMIKRGQRIAEWDPYTR 1020 Query: 1021 PVLSEVEGTIGFEDLVEGQSISETLDESTGIAKRVVIDWRTTRGGSDLRPAIVVKGKDGK 1080 P+L+E EGTIGFEDL EG SISETLDESTGIAKRVVIDWR TRGG+DLRPAIV+KGKDGK Sbjct: 1021 PILTEAEGTIGFEDLTEGLSISETLDESTGIAKRVVIDWRGTRGGADLRPAIVIKGKDGK 1080 Query: 1081 VMKLARGGDARYMLSVDAILSVDIGGKVMPGDILARISTESAKTRDITGGLPRVAELFEA 1140 V+KLARGGDARYMLSVDAILSVDIG V PGDILARISTESAKTRDITGGLPRVAELFEA Sbjct: 1081 VLKLARGGDARYMLSVDAILSVDIGATVKPGDILARISTESAKTRDITGGLPRVAELFEA 1140 Query: 1141 RKPKDAAIIAETAGTIRFGRDYKNKRRISIEPMDKTEEPREYLIPKGKHIHLQDGDIVEK 1200 RKPKDAAIIAE AGTIRFGRDYKNKRRISIEP+DKTEE REYLIPKGKHIHLQDGDIVEK Sbjct: 1141 RKPKDAAIIAEIAGTIRFGRDYKNKRRISIEPVDKTEEAREYLIPKGKHIHLQDGDIVEK 1200 Query: 1201 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV 1260 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQK+EV Sbjct: 1201 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKIEV 1260 Query: 1261 TDQGDTDMISGEQVDKIEFDALNTKAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQ 1320 TDQGDTDMI+GEQVDKIEFDALN KA+EEGKKPA+G PVLLGITKASLQTRSFFSAASFQ Sbjct: 1261 TDQGDTDMIAGEQVDKIEFDALNAKAQEEGKKPASGNPVLLGITKASLQTRSFFSAASFQ 1320 Query: 1321 ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMARIREVAVKRDKLILDEREKQ 1380 ETTRVLTEAAVNGK+DPLEGLKENVIVGRLIPAGTGASMARIREVA+KRDKLILDEREK Sbjct: 1321 ETTRVLTEAAVNGKIDPLEGLKENVIVGRLIPAGTGASMARIREVALKRDKLILDEREK- 1379 Query: 1381 QAAIVPTAPEAEPLALPPAE 1400 QAAIVP+ PE +PLALPPAE Sbjct: 1380 QAAIVPSQPEPQPLALPPAE 1399 >ref|YP_001240986.1| DNA-directed RNA polymerase subunit beta' [Bradyrhizobium sp. BTAi1] sp|A5ELN6.1|RPOC_BRASB RecName: Full=DNA-directed RNA polymerase subunit beta'; Short=RNAP subunit beta'; AltName: Full=RNA polymerase subunit beta'; AltName: Full=Transcriptase subunit beta' gb|ABQ37080.1| DNA-directed RNA polymerase subunit beta' [Bradyrhizobium sp. BTAi1] Length = 1399 Score = 2724 bits (7061), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1315/1400 (93%), Positives = 1360/1400 (97%), Gaps = 1/1400 (0%) Query: 1 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 60 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA Sbjct: 1 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 60 Query: 61 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS 120 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS Sbjct: 61 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS 120 Query: 121 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA 180 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA Sbjct: 121 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA 180 Query: 181 MIGAEAIRELLKGLELEKLEATLRADMAETDSDIKHKKLAKRLKIVEAFRVSGNKPEWMI 240 MIGAEAIRELL+GLELEKLE TLRA+M ETDSDIKHKKLAKRLKIVEAFR SGNKPEWMI Sbjct: 181 MIGAEAIRELLRGLELEKLEQTLRAEMQETDSDIKHKKLAKRLKIVEAFRHSGNKPEWMI 240 Query: 241 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM 300 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM Sbjct: 241 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM 300 Query: 301 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG 360 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG Sbjct: 301 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG 360 Query: 361 PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE 420 PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE Sbjct: 361 PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE 420 Query: 421 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL 480 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVC+AFNADFDGDQMAVHVPLSLEAQL Sbjct: 421 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQL 480 Query: 481 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKIFGDMAELEHALH 540 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYY+SIMREG+ G+G FG+MAELEHALH Sbjct: 481 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSIMREGMNGQGMTFGNMAELEHALH 540 Query: 541 SKVIHLHTKIKYRWEGLDEEGKQSKRWIETTAGRVMLGNLLPKNPKISYDIINKLMTKRE 600 +K IHLH+KIKYRWEG+DE GK SKRWIETTAGRVMLGN+LP++P+ISY+IINKLMTKRE Sbjct: 541 AKAIHLHSKIKYRWEGMDETGKISKRWIETTAGRVMLGNVLPRHPRISYEIINKLMTKRE 600 Query: 601 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPASKWKIVDQTRTL 660 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPA KWKIVD TRTL Sbjct: 601 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPAGKWKIVDTTRTL 660 Query: 661 AKDFEQQYNDGLITHGEKYNKVVDAWSKAGEEVAKAMMKEISSTKKTAAGADADINSIYM 720 AKDFEQQYNDGLITHGEKYNKVVDAWSKA EE+AK MMKEIS TKKTA GADADINSIYM Sbjct: 661 AKDFEQQYNDGLITHGEKYNKVVDAWSKASEEIAKEMMKEISVTKKTATGADADINSIYM 720 Query: 721 MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA 780 M+HSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA Sbjct: 721 MSHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA 780 Query: 781 DTALKTANSGYLTRRLVDVAQDCIITQTDCGTTLGIKMRAIVDAGTVVASLGSRILGRVA 840 DTALKTANSGYLTRRLVDVAQDCIITQ DCGT LGIKMRAIVDAGTVVASLGSRILGRV Sbjct: 781 DTALKTANSGYLTRRLVDVAQDCIITQDDCGTHLGIKMRAIVDAGTVVASLGSRILGRVP 840 Query: 841 CDDVRDPATNEVIIKRDTLMEESHVDAIQQAGIQEVKIRSALTCELINGICAKCYGRDLA 900 CDDVRDPATN V++K TLMEESH+DAIQQAG+QEVKIRSALTCEL+NGIC CYGRDLA Sbjct: 841 CDDVRDPATNAVLVKAGTLMEESHIDAIQQAGVQEVKIRSALTCELVNGICKMCYGRDLA 900 Query: 901 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNFDGKIVIRNKAI 960 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNF+G++VI+NKAI Sbjct: 901 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNFEGRVVIKNKAI 960 Query: 961 ARNSEGSLVAMVRNMVVAIVDADGTERATHRIQYGSKMHVDEGDMVKRGQRIAEWDPYTR 1020 ARNSEG L+AMVRNMVV IVD DG+ERATHRIQYG++MHVD+GDM+KRGQRIAEWDPYTR Sbjct: 961 ARNSEGHLIAMVRNMVVTIVDPDGSERATHRIQYGARMHVDDGDMIKRGQRIAEWDPYTR 1020 Query: 1021 PVLSEVEGTIGFEDLVEGQSISETLDESTGIAKRVVIDWRTTRGGSDLRPAIVVKGKDGK 1080 P+L+E EGTIGFEDL EG SISETLDESTGIAKRVVIDWR TRGG+DLRPAIV+KGKDGK Sbjct: 1021 PILTEAEGTIGFEDLTEGLSISETLDESTGIAKRVVIDWRGTRGGADLRPAIVIKGKDGK 1080 Query: 1081 VMKLARGGDARYMLSVDAILSVDIGGKVMPGDILARISTESAKTRDITGGLPRVAELFEA 1140 V+KLARGGDARYMLSVDAILSVD+G V PGDILARISTESAKTRDITGGLPRVAELFEA Sbjct: 1081 VLKLARGGDARYMLSVDAILSVDVGTTVKPGDILARISTESAKTRDITGGLPRVAELFEA 1140 Query: 1141 RKPKDAAIIAETAGTIRFGRDYKNKRRISIEPMDKTEEPREYLIPKGKHIHLQDGDIVEK 1200 RKPKDAAIIAE AGTIRFGRDYKNKRRISIEP+DKTEEPREYLIPKGKHIHLQDGDIVEK Sbjct: 1141 RKPKDAAIIAEIAGTIRFGRDYKNKRRISIEPVDKTEEPREYLIPKGKHIHLQDGDIVEK 1200 Query: 1201 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV 1260 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQK+EV Sbjct: 1201 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKIEV 1260 Query: 1261 TDQGDTDMISGEQVDKIEFDALNTKAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQ 1320 TDQGDTDMI+GEQVDKIEFDALN KA EEGKKPATG PVLLGITKASLQTRSFFSAASFQ Sbjct: 1261 TDQGDTDMIAGEQVDKIEFDALNAKAVEEGKKPATGNPVLLGITKASLQTRSFFSAASFQ 1320 Query: 1321 ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMARIREVAVKRDKLILDEREKQ 1380 ETTRVLTEAAVNGK+DPLEGLKENVIVGRLIPAGTGASMARIREVA+KRDKLILDEREK Sbjct: 1321 ETTRVLTEAAVNGKIDPLEGLKENVIVGRLIPAGTGASMARIREVALKRDKLILDEREK- 1379 Query: 1381 QAAIVPTAPEAEPLALPPAE 1400 QAAIVP+ PE +PLALPPAE Sbjct: 1380 QAAIVPSQPEPQPLALPPAE 1399 >ref|YP_002288658.1| DNA-directed RNA polymerase, beta' subunit [Oligotropha carboxidovorans OM5] ref|YP_004633282.1| DNA-directed RNA polymerase subunit beta' [Oligotropha carboxidovorans OM5] sp|B6JES1.1|RPOC_OLICO RecName: Full=DNA-directed RNA polymerase subunit beta'; Short=RNAP subunit beta'; AltName: Full=RNA polymerase subunit beta'; AltName: Full=Transcriptase subunit beta' gb|ACI92793.1| DNA-directed RNA polymerase, beta' subunit [Oligotropha carboxidovorans OM5] gb|AEI03464.1| DNA-directed RNA polymerase subunit beta' [Oligotropha carboxidovorans OM4] gb|AEI07041.1| DNA-directed RNA polymerase subunit beta' [Oligotropha carboxidovorans OM5] Length = 1399 Score = 2680 bits (6948), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1295/1400 (92%), Positives = 1345/1400 (96%), Gaps = 1/1400 (0%) Query: 1 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 60 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA Sbjct: 1 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 60 Query: 61 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS 120 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS Sbjct: 61 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS 120 Query: 121 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA 180 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSE+EYLKAQDEYGQDSFTA Sbjct: 121 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEEEYLKAQDEYGQDSFTA 180 Query: 181 MIGAEAIRELLKGLELEKLEATLRADMAETDSDIKHKKLAKRLKIVEAFRVSGNKPEWMI 240 MIGAEAIRELL+GL+LEKLEA LRADMAETDSDIKHKK AKRLKIVEAFR SGNKPEWMI Sbjct: 181 MIGAEAIRELLRGLDLEKLEAQLRADMAETDSDIKHKKFAKRLKIVEAFRNSGNKPEWMI 240 Query: 241 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM 300 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM Sbjct: 241 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM 300 Query: 301 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG 360 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG Sbjct: 301 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG 360 Query: 361 PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE 420 PEL+LHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE Sbjct: 361 PELKLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE 420 Query: 421 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL 480 HPVLLNRAPTLHRLGIQAFEP LIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL Sbjct: 421 HPVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL 480 Query: 481 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKIFGDMAELEHALH 540 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYY+SIMREGL GEGK++G+MAE+EHAL+ Sbjct: 481 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSIMREGLAGEGKVYGEMAEIEHALY 540 Query: 541 SKVIHLHTKIKYRWEGLDEEGKQSKRWIETTAGRVMLGNLLPKNPKISYDIINKLMTKRE 600 SKVIHLHTKIKYRW G+ E+GK +W ETTAGRVMLG +LP +PKI +D INKLMTKRE Sbjct: 541 SKVIHLHTKIKYRWHGVGEDGKPVTKWYETTAGRVMLGQVLPNHPKIPFDAINKLMTKRE 600 Query: 601 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPASKWKIVDQTRTL 660 ISGVIDQVYRHCGQKETVIFCDRIMALGF+NAFKAGISFGKDDMVVP KWK+VD TR++ Sbjct: 601 ISGVIDQVYRHCGQKETVIFCDRIMALGFHNAFKAGISFGKDDMVVPQGKWKVVDDTRSM 660 Query: 661 AKDFEQQYNDGLITHGEKYNKVVDAWSKAGEEVAKAMMKEISSTKKTAAGADADINSIYM 720 AK+FEQQYNDGLIT GEKYNKVVDAWSKA E++A MMKEISS KKT G +A INSIYM Sbjct: 661 AKEFEQQYNDGLITQGEKYNKVVDAWSKATEKIADEMMKEISSVKKTTKGNEAQINSIYM 720 Query: 721 MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA 780 MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA Sbjct: 721 MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA 780 Query: 781 DTALKTANSGYLTRRLVDVAQDCIITQTDCGTTLGIKMRAIVDAGTVVASLGSRILGRVA 840 DTALKTANSGYLTRRLVDVAQDCII +DCGT LGIKMRAIVDAGTVVASLGSRILGR A Sbjct: 781 DTALKTANSGYLTRRLVDVAQDCIINASDCGTNLGIKMRAIVDAGTVVASLGSRILGRTA 840 Query: 841 CDDVRDPATNEVIIKRDTLMEESHVDAIQQAGIQEVKIRSALTCELINGICAKCYGRDLA 900 C+D+R+P+TN VI+ R TLMEESHVDAIQ+AG+QEVKIRSALTCEL+NGICA CYGRDLA Sbjct: 841 CEDIREPSTNNVIVPRGTLMEESHVDAIQRAGVQEVKIRSALTCELVNGICAMCYGRDLA 900 Query: 901 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNFDGKIVIRNKAI 960 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQ+NEQSFVESNFDGK+ IRN+ I Sbjct: 901 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQINEQSFVESNFDGKVTIRNRGI 960 Query: 961 ARNSEGSLVAMVRNMVVAIVDADGTERATHRIQYGSKMHVDEGDMVKRGQRIAEWDPYTR 1020 A NSEG+ VAMVRNMVVAIVDADGTER THR+QYG++M VDEGD +KRGQRIAEWDPYTR Sbjct: 961 ATNSEGASVAMVRNMVVAIVDADGTERVTHRVQYGARMRVDEGDTIKRGQRIAEWDPYTR 1020 Query: 1021 PVLSEVEGTIGFEDLVEGQSISETLDESTGIAKRVVIDWRTTRGGSDLRPAIVVKGKDGK 1080 P+L+EVEGTIGFEDLVEGQSISETLDESTGIAKRVVIDWR+T G+DLRPAIVVKGKDGK Sbjct: 1021 PILTEVEGTIGFEDLVEGQSISETLDESTGIAKRVVIDWRSTGRGADLRPAIVVKGKDGK 1080 Query: 1081 VMKLARGGDARYMLSVDAILSVDIGGKVMPGDILARISTESAKTRDITGGLPRVAELFEA 1140 V+KL RGGDARYMLSVDAILSVDIG +V PGDILARISTESAKTRDITGGLPRVAELFEA Sbjct: 1081 VLKLQRGGDARYMLSVDAILSVDIGSQVKPGDILARISTESAKTRDITGGLPRVAELFEA 1140 Query: 1141 RKPKDAAIIAETAGTIRFGRDYKNKRRISIEPMDKTEEPREYLIPKGKHIHLQDGDIVEK 1200 R+PKDAAIIAETAGTIRFGRDYKNKRRISIEP DKTEEPREYLIPKGKHIHLQDGDIVEK Sbjct: 1141 RRPKDAAIIAETAGTIRFGRDYKNKRRISIEPTDKTEEPREYLIPKGKHIHLQDGDIVEK 1200 Query: 1201 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV 1260 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV Sbjct: 1201 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV 1260 Query: 1261 TDQGDTDMISGEQVDKIEFDALNTKAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQ 1320 TDQGDTDMISGEQVDKIEFD N KAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQ Sbjct: 1261 TDQGDTDMISGEQVDKIEFDQNNDKAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQ 1320 Query: 1321 ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMARIREVAVKRDKLILDEREKQ 1380 ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMA+IREVA+KRDKLI DEREK Sbjct: 1321 ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAMKRDKLIQDEREK- 1379 Query: 1381 QAAIVPTAPEAEPLALPPAE 1400 QAAI P APEAEPLALPPAE Sbjct: 1380 QAAITPAAPEAEPLALPPAE 1399 >ref|YP_576814.1| DNA-directed RNA polymerase subunit beta' [Nitrobacter hamburgensis X14] sp|Q1QN43.1|RPOC_NITHX RecName: Full=DNA-directed RNA polymerase subunit beta'; Short=RNAP subunit beta'; AltName: Full=RNA polymerase subunit beta'; AltName: Full=Transcriptase subunit beta' gb|ABE62354.1| DNA-directed RNA polymerase subunit beta' [Nitrobacter hamburgensis X14] Length = 1399 Score = 2678 bits (6942), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1305/1400 (93%), Positives = 1357/1400 (96%), Gaps = 1/1400 (0%) Query: 1 MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 60 MNQE+MNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA Sbjct: 1 MNQEVMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 60 Query: 61 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS 120 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS Sbjct: 61 RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS 120 Query: 121 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA 180 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSE+EYL+AQDEYGQDSFTA Sbjct: 121 LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEEEYLRAQDEYGQDSFTA 180 Query: 181 MIGAEAIRELLKGLELEKLEATLRADMAETDSDIKHKKLAKRLKIVEAFRVSGNKPEWMI 240 MIGAEAIRELLKGLELE+LEA LRA+M T+SDIKHKKLAKRLKIVEAFR SGNKPEWMI Sbjct: 181 MIGAEAIRELLKGLELERLEAELRAEMQATESDIKHKKLAKRLKIVEAFRFSGNKPEWMI 240 Query: 241 MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM 300 +TVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM Sbjct: 241 LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM 300 Query: 301 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG 360 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG Sbjct: 301 LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG 360 Query: 361 PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE 420 PEL+LHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE Sbjct: 361 PELKLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE 420 Query: 421 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL 480 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL Sbjct: 421 HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL 480 Query: 481 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKIFGDMAELEHALH 540 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYY+SIMREGLPGEGK+FGDMAELEHALH Sbjct: 481 EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSIMREGLPGEGKVFGDMAELEHALH 540 Query: 541 SKVIHLHTKIKYRWEGLDEEGKQSKRWIETTAGRVMLGNLLPKNPKISYDIINKLMTKRE 600 +KVIHLHTKIKYRW+ + E+GK KR I+TTAGRVMLG +LPK+PKIS+D INKLMTKRE Sbjct: 541 AKVIHLHTKIKYRWDHIGEDGKPVKRLIDTTAGRVMLGQVLPKSPKISFDAINKLMTKRE 600 Query: 601 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPASKWKIVDQTRTL 660 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVP SKWKIVD TR++ Sbjct: 601 ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHSKWKIVDATRSM 660 Query: 661 AKDFEQQYNDGLITHGEKYNKVVDAWSKAGEEVAKAMMKEISSTKKTAAGADADINSIYM 720 AKDFEQQYNDGLITHGEKYNKVVDAWSKA EE+AK MMKEIS+ KK G +A INSIYM Sbjct: 661 AKDFEQQYNDGLITHGEKYNKVVDAWSKATEEIAKEMMKEISAVKKNPKGGEAQINSIYM 720 Query: 721 MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA 780 MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA Sbjct: 721 MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA 780 Query: 781 DTALKTANSGYLTRRLVDVAQDCIITQTDCGTTLGIKMRAIVDAGTVVASLGSRILGRVA 840 DTALKTANSGYLTRRLVDVAQDCIITQ DCGT LGIKMRAIVD+GTVVASLGSRILGR A Sbjct: 781 DTALKTANSGYLTRRLVDVAQDCIITQDDCGTKLGIKMRAIVDSGTVVASLGSRILGRTA 840 Query: 841 CDDVRDPATNEVIIKRDTLMEESHVDAIQQAGIQEVKIRSALTCELINGICAKCYGRDLA 900 C+D+R+ ATN+V+IKR+TLMEESHVD I +AGIQEVKIRSALTCEL+NGIC KCYGRDLA Sbjct: 841 CEDIREAATNKVLIKRNTLMEESHVDQISRAGIQEVKIRSALTCELVNGICGKCYGRDLA 900 Query: 901 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNFDGKIVIRNKAI 960 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQS +ESNFDGKI IRNKAI Sbjct: 901 RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSVIESNFDGKITIRNKAI 960 Query: 961 ARNSEGSLVAMVRNMVVAIVDADGTERATHRIQYGSKMHVDEGDMVKRGQRIAEWDPYTR 1020 ARN EG LVAMVRNMVVA+ DADGTERATHRIQYG++MHVDEGD+VKRGQRIAEWDPY+R Sbjct: 961 ARNGEGHLVAMVRNMVVAVADADGTERATHRIQYGARMHVDEGDLVKRGQRIAEWDPYSR 1020 Query: 1021 PVLSEVEGTIGFEDLVEGQSISETLDESTGIAKRVVIDWRTTRGGSDLRPAIVVKGKDGK 1080 P+L+EVEGTIGFEDLVEGQSISETLDESTGIAKR+VIDWR+TRGG+DLRPAIV+KGKDGK Sbjct: 1021 PILTEVEGTIGFEDLVEGQSISETLDESTGIAKRIVIDWRSTRGGADLRPAIVIKGKDGK 1080 Query: 1081 VMKLARGGDARYMLSVDAILSVDIGGKVMPGDILARISTESAKTRDITGGLPRVAELFEA 1140 V+KL RGGDARYMLSVDAILSVD+G KV PGDILARISTESAKTRDITGGLPRVAELFEA Sbjct: 1081 VLKLPRGGDARYMLSVDAILSVDVGAKVTPGDILARISTESAKTRDITGGLPRVAELFEA 1140 Query: 1141 RKPKDAAIIAETAGTIRFGRDYKNKRRISIEPMDKTEEPREYLIPKGKHIHLQDGDIVEK 1200 R+PKDAAIIAE AGTIRFGRDYKNKRRISIEP+DK EE REYLIPKGKHIHLQDGDIVEK Sbjct: 1141 RRPKDAAIIAEIAGTIRFGRDYKNKRRISIEPVDKDEEAREYLIPKGKHIHLQDGDIVEK 1200 Query: 1201 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV 1260 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV Sbjct: 1201 GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV 1260 Query: 1261 TDQGDTDMISGEQVDKIEFDALNTKAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQ 1320 TDQG+TDMISGEQ+DKIEFD LN KAKEEGKK ATGTPVLLGITKASLQTRSFFSAASFQ Sbjct: 1261 TDQGETDMISGEQIDKIEFDRLNVKAKEEGKKIATGTPVLLGITKASLQTRSFFSAASFQ 1320 Query: 1321 ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMARIREVAVKRDKLILDEREKQ 1380 ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMA+IREVAVKRDKLILDEREK Sbjct: 1321 ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAVKRDKLILDEREK- 1379 Query: 1381 QAAIVPTAPEAEPLALPPAE 1400 QAAIVP+APEAEPLALPPAE Sbjct: 1380 QAAIVPSAPEAEPLALPPAE 1399