BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0070.0019.p (245 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01044889.1| two-component response regulator [Nitrobacter... 426 e-117 ref|NP_767669.1| two-component response regulator [Bradyrhizobiu... 425 e-117 ref|NP_950125.1| two-component transcriptional regulator [Rhodop... 421 e-116 ref|YP_571494.1| winged helix family two component transcription... 418 e-115 ref|YP_001236883.1| two component transcriptional regulator [Bra... 417 e-114 >ref|ZP_01044889.1| two-component response regulator [Nitrobacter sp. Nb-311A] gb|EAQ36894.1| two-component response regulator [Nitrobacter sp. Nb-311A] Length = 245 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 209/245 (85%), Positives = 224/245 (91%) Query: 1 MSQNPHIFIVDDEAPAREMVGDYLKMHGFGVTLCDGGKSLRKEIEGCTPDLVVLDLNMPE 60 M++NPHI +VDDEAPAREMVGDYLKMHGF +TLCDGG+SLR+ I TPDLVVLDLNMPE Sbjct: 1 MNRNPHIIVVDDEAPAREMVGDYLKMHGFAITLCDGGRSLREAIGRTTPDLVVLDLNMPE 60 Query: 61 EDGLSIIRDLKSKINVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR 120 EDGLSIIRDLKS+ NVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR Sbjct: 61 EDGLSIIRDLKSRTNVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR 120 Query: 121 RSGPAKTATPEPASAKAEKEQLVRFGTKWLDLEAQALRDDEGNEHPLTASEFGLLKVFAA 180 RS P P+ A+A +QLVRFGTKWLDL+AQALRD+EGNEHPLTASEFGLLKVFAA Sbjct: 121 RSAPKTDGAPDVAAATPAGQQLVRFGTKWLDLDAQALRDNEGNEHPLTASEFGLLKVFAA 180 Query: 181 NPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIEFDPTKPSVIRTIRGGGYLFSP 240 NPKRVLSRERLLELANARD+EAFDRA+DLRIMRIRRKIE DP KP+VIRTIRGGGYLFSP Sbjct: 181 NPKRVLSRERLLELANARDSEAFDRAIDLRIMRIRRKIEPDPAKPAVIRTIRGGGYLFSP 240 Query: 241 TGDKA 245 GDKA Sbjct: 241 PGDKA 245 >ref|NP_767669.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC46294.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] Length = 245 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 221/244 (90%), Positives = 231/244 (94%) Query: 1 MSQNPHIFIVDDEAPAREMVGDYLKMHGFGVTLCDGGKSLRKEIEGCTPDLVVLDLNMPE 60 M+Q+ HI IVDDEAPAREMVGDYLKMHGF VTLCDGGKSLR I+G PDLVVLDLNMPE Sbjct: 1 MTQSQHIMIVDDEAPAREMVGDYLKMHGFTVTLCDGGKSLRAAIDGGMPDLVVLDLNMPE 60 Query: 61 EDGLSIIRDLKSKINVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR 120 EDGLSIIRDLKS+INVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR Sbjct: 61 EDGLSIIRDLKSRINVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR 120 Query: 121 RSGPAKTATPEPASAKAEKEQLVRFGTKWLDLEAQALRDDEGNEHPLTASEFGLLKVFAA 180 RSGPAK A PE A+AK++K+QLVRFGTKWLDLEAQALRDDEGNEHPLTASEFGLLKVFAA Sbjct: 121 RSGPAKAAAPEAAAAKSDKDQLVRFGTKWLDLEAQALRDDEGNEHPLTASEFGLLKVFAA 180 Query: 181 NPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIEFDPTKPSVIRTIRGGGYLFSP 240 NPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIE DP KP+VIRTIRGGGYLFSP Sbjct: 181 NPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIEPDPAKPAVIRTIRGGGYLFSP 240 Query: 241 TGDK 244 G+K Sbjct: 241 AGEK 244 >ref|NP_950125.1| two-component transcriptional regulator [Rhodopseudomonas palustris CGA009] ref|YP_001994239.1| winged helix family two component transcriptional regulator [Rhodopseudomonas palustris TIE-1] emb|CAE30231.1| two-component transcriptional regulator, winged helix family [Rhodopseudomonas palustris CGA009] gb|ACF03764.1| two component transcriptional regulator, winged helix family [Rhodopseudomonas palustris TIE-1] Length = 246 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 216/246 (87%), Positives = 225/246 (91%), Gaps = 1/246 (0%) Query: 1 MSQNPHIFIVDDEAPAREMVGDYLKMHGFGVTLCDGGKSLRKEIEGCTPDLVVLDLNMPE 60 MSQNPHI +VDDEAPAREMVGDYLKMHGF VTLCDGGKSLR EI PDLVVLDLNMPE Sbjct: 1 MSQNPHIIVVDDEAPAREMVGDYLKMHGFAVTLCDGGKSLRAEIATKLPDLVVLDLNMPE 60 Query: 61 EDGLSIIRDLKSKINVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR 120 EDGLSIIRDLK+K NVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR Sbjct: 61 EDGLSIIRDLKAKSNVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR 120 Query: 121 RSGPAK-TATPEPASAKAEKEQLVRFGTKWLDLEAQALRDDEGNEHPLTASEFGLLKVFA 179 R+ P K A ++AKA+ QLVRFGTKWLDLEAQALRDD+GNEHPLTASEFGLLKVFA Sbjct: 121 RAAPPKPVAAEPASAAKADNAQLVRFGTKWLDLEAQALRDDDGNEHPLTASEFGLLKVFA 180 Query: 180 ANPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIEFDPTKPSVIRTIRGGGYLFS 239 ANPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIE DPTKP+VIRTIRGGGYLFS Sbjct: 181 ANPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIEPDPTKPAVIRTIRGGGYLFS 240 Query: 240 PTGDKA 245 P D+A Sbjct: 241 PASDRA 246 >ref|YP_571494.1| winged helix family two component transcriptional regulator [Rhodopseudomonas palustris BisB5] gb|ABE41593.1| two component transcriptional regulator, winged helix family [Rhodopseudomonas palustris BisB5] Length = 247 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 214/246 (86%), Positives = 220/246 (89%), Gaps = 2/246 (0%) Query: 1 MSQNPHIFIVDDEAPAREMVGDYLKMHGFGVTLCDGGKSLRKEIEGCTPDLVVLDLNMPE 60 MSQNPHI +VDDEAPAREMVGDYL+MHGF VTLCDGGKSLR EIE PDLVVLDLNMPE Sbjct: 1 MSQNPHIIVVDDEAPAREMVGDYLRMHGFAVTLCDGGKSLRAEIETKVPDLVVLDLNMPE 60 Query: 61 EDGLSIIRDLKSKINVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR 120 EDGLSIIRDLK+K NVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR Sbjct: 61 EDGLSIIRDLKAKTNVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR 120 Query: 121 RS--GPAKTATPEPASAKAEKEQLVRFGTKWLDLEAQALRDDEGNEHPLTASEFGLLKVF 178 RS P P K EQLVRFGTKWLDLEAQALRDD+GNEHPLTASEFGLLKVF Sbjct: 121 RSAPRPTAAPAPAATPTKTANEQLVRFGTKWLDLEAQALRDDDGNEHPLTASEFGLLKVF 180 Query: 179 AANPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIEFDPTKPSVIRTIRGGGYLF 238 AANPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIE DPTKP+VIRTIRGGGYLF Sbjct: 181 AANPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIEPDPTKPAVIRTIRGGGYLF 240 Query: 239 SPTGDK 244 SP D+ Sbjct: 241 SPASDR 246 >ref|YP_001236883.1| two component transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ32977.1| two component transcriptional regulator, winged helix family [Bradyrhizobium sp. BTAi1] Length = 248 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 215/248 (86%), Positives = 225/248 (90%), Gaps = 3/248 (1%) Query: 1 MSQNPHIFIVDDEAPAREMVGDYLKMHGFGVTLCDGGKSLRKEIEGCTPDLVVLDLNMPE 60 MSQ+ HI IVDDEAPAREMVGDYLKMHGF VTLCDGGKSLR I+ DLVVLDLNMPE Sbjct: 1 MSQSQHIIIVDDEAPAREMVGDYLKMHGFTVTLCDGGKSLRSAIDTGPADLVVLDLNMPE 60 Query: 61 EDGLSIIRDLKSKINVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR 120 EDGLSIIRDLK + N+PVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR Sbjct: 61 EDGLSIIRDLKGRTNIPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR 120 Query: 121 RSGPAK---TATPEPASAKAEKEQLVRFGTKWLDLEAQALRDDEGNEHPLTASEFGLLKV 177 RSGPAK +A+ E AKA+ QLVRFGTKWLDL+AQALRDDEGNEHPLTASEFGLLKV Sbjct: 121 RSGPAKAAASASAEVVEAKAKDPQLVRFGTKWLDLDAQALRDDEGNEHPLTASEFGLLKV 180 Query: 178 FAANPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIEFDPTKPSVIRTIRGGGYL 237 FAANPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIE DP KP+VIRTIRGGGYL Sbjct: 181 FAANPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIEPDPAKPAVIRTIRGGGYL 240 Query: 238 FSPTGDKA 245 FSP G+KA Sbjct: 241 FSPAGEKA 248