BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0070.0015.p         (132 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_950122.1| family 1 extracellular solute-binding protein [...   201   3e-50
ref|YP_001994236.1| family 1 extracellular solute-binding protei...   198   2e-49
ref|YP_488258.1| extracellular solute-binding protein [Rhodopseu...   197   4e-49
ref|YP_001208640.1| sugar ABC transporter substrate-binding prot...   196   9e-49
ref|YP_578874.1| extracellular solute-binding protein [Nitrobact...   196   1e-48

>ref|NP_950122.1| family 1 extracellular solute-binding protein [Rhodopseudomonas
           palustris CGA009]
 emb|CAE30228.1| putative sn-glycerol 3-phosphate transport system; periplasmic
           binding protein [Rhodopseudomonas palustris CGA009]
          Length = 442

 Score =  201 bits (511), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 96/126 (76%), Positives = 110/126 (87%)

Query: 6   KLALKLLHLVVAALLLVSPARAATEIMWWHAMSGELGKQLEKLAADFNASQSDYRIVPAY 65
           +LA     ++V A   ++PA AATEI WWHAMSGELG+QLEKLAADFNASQSDYR+VP Y
Sbjct: 7   RLAQIATAVLVCATAGIAPAGAATEIAWWHAMSGELGRQLEKLAADFNASQSDYRVVPTY 66

Query: 66  KGNYTETVTAAIFAFRSRSQPAIVQVNEIATATMMAARGAIYPVFELMRDQSEAFAPSAY 125
           KGNYT+TVTAAIFAFRS SQPAIVQVNEIATATMMAA+GA+YPV+ELMRD+SE F+P+ Y
Sbjct: 67  KGNYTQTVTAAIFAFRSSSQPAIVQVNEIATATMMAAKGAVYPVYELMRDESEVFSPADY 126

Query: 126 LPAVAG 131
           LPAV G
Sbjct: 127 LPAVTG 132


>ref|YP_001994236.1| family 1 extracellular solute-binding protein [Rhodopseudomonas
           palustris TIE-1]
 gb|ACF03761.1| extracellular solute-binding protein family 1 [Rhodopseudomonas
           palustris TIE-1]
          Length = 442

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/118 (78%), Positives = 105/118 (88%)

Query: 14  LVVAALLLVSPARAATEIMWWHAMSGELGKQLEKLAADFNASQSDYRIVPAYKGNYTETV 73
           ++V A   + PA AATEI WWHAMSGELG+QLEKLAADFNASQSDYR+VP YKGNYT+TV
Sbjct: 15  VLVCATAGIVPAGAATEIAWWHAMSGELGRQLEKLAADFNASQSDYRVVPTYKGNYTQTV 74

Query: 74  TAAIFAFRSRSQPAIVQVNEIATATMMAARGAIYPVFELMRDQSEAFAPSAYLPAVAG 131
           TAAIFAFRS SQP IVQVNEIATATMMAA+GA+YPV+ELMRD+SE F+P+ YLPAV G
Sbjct: 75  TAAIFAFRSSSQPTIVQVNEIATATMMAAKGAVYPVYELMRDESEVFSPADYLPAVTG 132


>ref|YP_488258.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           HaA2]
 gb|ABD09347.1| extracellular solute-binding protein, family 1 [Rhodopseudomonas
           palustris HaA2]
          Length = 448

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 94/124 (75%), Positives = 111/124 (89%), Gaps = 6/124 (4%)

Query: 14  LVVAALLLVS------PARAATEIMWWHAMSGELGKQLEKLAADFNASQSDYRIVPAYKG 67
           L+++A++L++      PA+AATEI WWHAMSG+LG++LEKLAADFN SQSDYR+VP YKG
Sbjct: 15  LLISAVVLLAIAVGNAPAQAATEIAWWHAMSGQLGRELEKLAADFNTSQSDYRVVPTYKG 74

Query: 68  NYTETVTAAIFAFRSRSQPAIVQVNEIATATMMAARGAIYPVFELMRDQSEAFAPSAYLP 127
           NYTE VTAAIFAFRS SQPAIVQVNEIATATMMAA+GA+YPV+ELMRD+ EAF+PS YLP
Sbjct: 75  NYTEAVTAAIFAFRSSSQPAIVQVNEIATATMMAAKGAVYPVYELMRDEKEAFSPSDYLP 134

Query: 128 AVAG 131
           AVAG
Sbjct: 135 AVAG 138


>ref|YP_001208640.1| sugar ABC transporter substrate-binding protein [Bradyrhizobium sp.
           ORS 278]
 emb|CAL80425.1| Putative ABC transporter, substrate-binding protein; putative sugar
           transporter [Bradyrhizobium sp. ORS 278]
          Length = 448

 Score =  196 bits (498), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 91/103 (88%), Positives = 100/103 (97%)

Query: 29  TEIMWWHAMSGELGKQLEKLAADFNASQSDYRIVPAYKGNYTETVTAAIFAFRSRSQPAI 88
           T+IMWWHAMSGELGKQ+++LAADFNASQSDYRIVP+YKG+YTETVTAAIFAFRSR QPAI
Sbjct: 34  TDIMWWHAMSGELGKQVDRLAADFNASQSDYRIVPSYKGSYTETVTAAIFAFRSRGQPAI 93

Query: 89  VQVNEIATATMMAARGAIYPVFELMRDQSEAFAPSAYLPAVAG 131
           VQVNEIATATM AARGAIYPVFELMRD+ E+F+PSAYLPAVAG
Sbjct: 94  VQVNEIATATMTAARGAIYPVFELMRDEQESFSPSAYLPAVAG 136


>ref|YP_578874.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14]
 gb|ABE64414.1| carbohydrate ABC transporter substrate-binding protein, CUT1 family
           [Nitrobacter hamburgensis X14]
          Length = 460

 Score =  196 bits (498), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/120 (77%), Positives = 105/120 (87%), Gaps = 2/120 (1%)

Query: 12  LHLVVAALLLVSPARAATEIMWWHAMSGELGKQLEKLAADFNASQSDYRIVPAYKGNYTE 71
           +H   AAL   +PARA TEI WWHAMSGELG++L +LA +FN SQS+YRIVP YKGNYTE
Sbjct: 33  IHCRTAAL--PAPARAVTEIAWWHAMSGELGRRLGRLATEFNGSQSEYRIVPTYKGNYTE 90

Query: 72  TVTAAIFAFRSRSQPAIVQVNEIATATMMAARGAIYPVFELMRDQSEAFAPSAYLPAVAG 131
           TVTAAIFAFRSRSQPAIVQVNEIAT TMMAA+GAIYPVFELMRD+ EAF+P+AYLPA+ G
Sbjct: 91  TVTAAIFAFRSRSQPAIVQVNEIATGTMMAAQGAIYPVFELMRDEDEAFSPAAYLPAITG 150