BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0070.0013.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242867.1| putative high-affinity branched-chain amino ... 520 e-146 ref|YP_001203129.1| high-affinity branched-chain amino acid ABC ... 518 e-145 ref|NP_774465.1| ABC transporter permease protein [Bradyrhizobiu... 508 e-142 ref|YP_782693.1| inner-membrane translocator [Rhodopseudomonas p... 505 e-141 ref|NP_949058.1| ABC transporter permease [Rhodopseudomonas palu... 500 e-139 >ref|YP_001242867.1| putative high-affinity branched-chain amino acid transport system permease livH [Bradyrhizobium sp. BTAi1] gb|ABQ38961.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 292 Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust. Identities = 261/292 (89%), Positives = 280/292 (95%) Query: 1 MELFANQVLAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTFVSWQLMQWGVPY 60 MELF NQVLAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTFVSWQLMQWGVPY Sbjct: 1 MELFTNQVLAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTFVSWQLMQWGVPY 60 Query: 61 WGAFVLTVAFSFLAGIVIERLLFKPLAKAPILTNVAGFIALYAIINSVAGLIWDFTIKQY 120 WGAFVLT+AFSF GIVIER+LFKPLAKAPILT VAGFIAL++IINS AGLIWDFTIKQY Sbjct: 61 WGAFVLTLAFSFAGGIVIERVLFKPLAKAPILTQVAGFIALFSIINSCAGLIWDFTIKQY 120 Query: 121 PTPFGSSPFLGSQLISTHQAGMIGITLLMLLLLFFFFRFTRVGLAMRAAASLPESARLVG 180 PTPFGS+PFLGSQLISTHQAGMIGIT+L+L+ L+ FF++TR+GLAMRAAAS+PESARLVG Sbjct: 121 PTPFGSTPFLGSQLISTHQAGMIGITVLLLIGLYVFFQYTRIGLAMRAAASVPESARLVG 180 Query: 181 INTSWMIALGWGMASAIGSIAGMMIAPVVFLEPNMMLGVLIYGFAAAVLGGLSSPFGAVM 240 INTSWMIALGWGMA+AIGSIAGM+IAPVVFLEPNMM GVLIYGFAAAVLGGL+SPFGAV+ Sbjct: 181 INTSWMIALGWGMAAAIGSIAGMLIAPVVFLEPNMMGGVLIYGFAAAVLGGLTSPFGAVL 240 Query: 241 GGFLVGVFENLVGTYIPGVGNELKLPIALALIIVVLVVKPAGLFGRAIVKRV 292 GGFLVG+FENL GTYIP VGNE+KLPIALALII VLVVKPAGLFGR IVKRV Sbjct: 241 GGFLVGIFENLAGTYIPHVGNEMKLPIALALIITVLVVKPAGLFGRNIVKRV 292 >ref|YP_001203129.1| high-affinity branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS 278] emb|CAL74892.1| Putative high-affinity branched-chain amino acid transport system permease protein livH (ABC superfamily, membrane) [Bradyrhizobium sp. ORS 278] Length = 292 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 259/292 (88%), Positives = 280/292 (95%) Query: 1 MELFANQVLAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTFVSWQLMQWGVPY 60 MELF NQVLAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTF+SWQLMQWG+PY Sbjct: 1 MELFTNQVLAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTFISWQLMQWGLPY 60 Query: 61 WGAFVLTVAFSFLAGIVIERLLFKPLAKAPILTNVAGFIALYAIINSVAGLIWDFTIKQY 120 W AFV+T+AFSF+ GI IER+LFKPLAKAPILT VAGFIAL++IINS AGLIWDFTIKQY Sbjct: 61 WAAFVVTLAFSFIGGIAIERVLFKPLAKAPILTQVAGFIALFSIINSCAGLIWDFTIKQY 120 Query: 121 PTPFGSSPFLGSQLISTHQAGMIGITLLMLLLLFFFFRFTRVGLAMRAAASLPESARLVG 180 PTPFGSSPFLGSQLISTHQAGMIGITLL+L+ L+FFF++TRVGLAMRAAA+LPESARLVG Sbjct: 121 PTPFGSSPFLGSQLISTHQAGMIGITLLLLVGLYFFFQYTRVGLAMRAAAALPESARLVG 180 Query: 181 INTSWMIALGWGMASAIGSIAGMMIAPVVFLEPNMMLGVLIYGFAAAVLGGLSSPFGAVM 240 INTSWMIALGWGMA+AIGSIAGM+IAPVVFLEPNMM GVLIYGFAAAVLGGL+SPFGAV+ Sbjct: 181 INTSWMIALGWGMAAAIGSIAGMLIAPVVFLEPNMMGGVLIYGFAAAVLGGLTSPFGAVL 240 Query: 241 GGFLVGVFENLVGTYIPGVGNELKLPIALALIIVVLVVKPAGLFGRAIVKRV 292 GGFLVG+FENL GTYIP VGNE+KLPIALALII VLV+KPAGLFGR IVKRV Sbjct: 241 GGFLVGIFENLAGTYIPHVGNEMKLPIALALIISVLVIKPAGLFGRNIVKRV 292 >ref|NP_774465.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53090.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 292 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 261/292 (89%), Positives = 281/292 (96%) Query: 1 MELFANQVLAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTFVSWQLMQWGVPY 60 MELF NQVLAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTF+SWQLMQWG+PY Sbjct: 1 MELFTNQVLAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTFISWQLMQWGIPY 60 Query: 61 WGAFVLTVAFSFLAGIVIERLLFKPLAKAPILTNVAGFIALYAIINSVAGLIWDFTIKQY 120 W AFV+T+A SF+ GI IER+LFKPLAKAP+LTNVAGFIAL+AIINS AGLIWDFTIKQY Sbjct: 61 WAAFVITLALSFVGGIAIERILFKPLAKAPVLTNVAGFIALFAIINSSAGLIWDFTIKQY 120 Query: 121 PTPFGSSPFLGSQLISTHQAGMIGITLLMLLLLFFFFRFTRVGLAMRAAASLPESARLVG 180 PTPFGSSPFLGSQLISTHQAGMIG+T+L+LL L+FFF++TR+GLAMRAAAS+PESARLVG Sbjct: 121 PTPFGSSPFLGSQLISTHQAGMIGVTVLLLLGLYFFFQYTRIGLAMRAAASVPESARLVG 180 Query: 181 INTSWMIALGWGMASAIGSIAGMMIAPVVFLEPNMMLGVLIYGFAAAVLGGLSSPFGAVM 240 INTSWMIALGWGMASAIGSIAGM+IAPVVFLEPNMM GVLIYGFAAAVLGGL+SPFGAV+ Sbjct: 181 INTSWMIALGWGMASAIGSIAGMLIAPVVFLEPNMMGGVLIYGFAAAVLGGLTSPFGAVV 240 Query: 241 GGFLVGVFENLVGTYIPGVGNELKLPIALALIIVVLVVKPAGLFGRAIVKRV 292 GGFLVG+FENL GTYIPGVGNELKLPIALALII VLVVKPAGLFGR IVKRV Sbjct: 241 GGFLVGIFENLAGTYIPGVGNELKLPIALALIISVLVVKPAGLFGRHIVKRV 292 >ref|YP_782693.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gb|ABJ07713.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 292 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 254/292 (86%), Positives = 280/292 (95%) Query: 1 MELFANQVLAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTFVSWQLMQWGVPY 60 MEL NQVLAGIATGAIYACMALA+VMIYQAIDHLNFAQGEMAMFSTF++WQL+QWGVPY Sbjct: 1 MELLTNQVLAGIATGAIYACMALAIVMIYQAIDHLNFAQGEMAMFSTFIAWQLIQWGVPY 60 Query: 61 WGAFVLTVAFSFLAGIVIERLLFKPLAKAPILTNVAGFIALYAIINSVAGLIWDFTIKQY 120 WGAFVLT+AFSF G++IERLLFKPLA APILT+VAGFIAL+AIINSVAGL WDFTIKQ+ Sbjct: 61 WGAFVLTLAFSFAGGVIIERLLFKPLANAPILTHVAGFIALFAIINSVAGLTWDFTIKQF 120 Query: 121 PTPFGSSPFLGSQLISTHQAGMIGITLLMLLLLFFFFRFTRVGLAMRAAASLPESARLVG 180 P+PFGSSPFLGSQLISTHQAGMIG+TL++LLLL+FFF++TRVGLAMRA+A+ PESARLVG Sbjct: 121 PSPFGSSPFLGSQLISTHQAGMIGVTLVLLLLLYFFFQYTRVGLAMRASAAQPESARLVG 180 Query: 181 INTSWMIALGWGMASAIGSIAGMMIAPVVFLEPNMMLGVLIYGFAAAVLGGLSSPFGAVM 240 +NTSWM+ALGWGMASAIG+IAGM+IAPVVFLEPNMM GVLIYGFAAAVLGGL+SPFGAV+ Sbjct: 181 VNTSWMVALGWGMASAIGAIAGMLIAPVVFLEPNMMGGVLIYGFAAAVLGGLTSPFGAVV 240 Query: 241 GGFLVGVFENLVGTYIPGVGNELKLPIALALIIVVLVVKPAGLFGRAIVKRV 292 GGFLVGVFENL GTYIPGVGNELKLPIALALII VLVVKP GLFGR +VKRV Sbjct: 241 GGFLVGVFENLAGTYIPGVGNELKLPIALALIITVLVVKPNGLFGRTVVKRV 292 >ref|NP_949058.1| ABC transporter permease [Rhodopseudomonas palustris CGA009] ref|YP_001993213.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] emb|CAE29162.1| possible ABC transporter, permease protein [Rhodopseudomonas palustris CGA009] gb|ACF02738.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 292 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 255/292 (87%), Positives = 278/292 (95%) Query: 1 MELFANQVLAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTFVSWQLMQWGVPY 60 M+LF NQ+LAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTFV+WQLMQWGVPY Sbjct: 1 MDLFLNQILAGIATGAIYACMALAVVMIYQAIDHLNFAQGEMAMFSTFVAWQLMQWGVPY 60 Query: 61 WGAFVLTVAFSFLAGIVIERLLFKPLAKAPILTNVAGFIALYAIINSVAGLIWDFTIKQY 120 WGAFVLT+AFSF G++IER LFKPL AP+LT+VAGFIAL+AIINSVAGL WDFTIKQ+ Sbjct: 61 WGAFVLTLAFSFAGGVIIERALFKPLGNAPVLTHVAGFIALFAIINSVAGLTWDFTIKQF 120 Query: 121 PTPFGSSPFLGSQLISTHQAGMIGITLLMLLLLFFFFRFTRVGLAMRAAASLPESARLVG 180 P+PFGSSPFLGSQLISTHQAGMIG+T+++L+LLF FF++TR+GLAMRAAAS PESARLVG Sbjct: 121 PSPFGSSPFLGSQLISTHQAGMIGVTIVLLILLFLFFQYTRIGLAMRAAASQPESARLVG 180 Query: 181 INTSWMIALGWGMASAIGSIAGMMIAPVVFLEPNMMLGVLIYGFAAAVLGGLSSPFGAVM 240 INTSWMIALGWGMA+AIGSIAGM+IAPVVFLEPNMM GVLIYGFAAAVLGGLSSPFGAV+ Sbjct: 181 INTSWMIALGWGMAAAIGSIAGMLIAPVVFLEPNMMGGVLIYGFAAAVLGGLSSPFGAVV 240 Query: 241 GGFLVGVFENLVGTYIPGVGNELKLPIALALIIVVLVVKPAGLFGRAIVKRV 292 GGFLVGVFENL GTYIPGVGNELKLPIALALI+ VLVVKP GLFGR IVKRV Sbjct: 241 GGFLVGVFENLAGTYIPGVGNELKLPIALALIVTVLVVKPTGLFGRTIVKRV 292