BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0070.0010.p (265 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774463.1| ABC transporter ATP-binding protein [Bradyrhizo... 502 e-140 ref|YP_001203131.1| high-affinity branched-chain amino acid ABC ... 498 e-139 ref|YP_001242865.1| high-affinity branched-chain amino acid tran... 491 e-137 ref|YP_485363.1| ABC transporter related [Rhodopseudomonas palus... 468 e-130 ref|YP_570679.1| ABC transporter-like protein [Rhodopseudomonas ... 466 e-129 >ref|NP_774463.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53088.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 245/265 (92%), Positives = 256/265 (96%) Query: 1 MTQAQLAQGNDPLLAVRDVSVVFGGIIALNGVSFDMRHGQILGLIGPNGAGKTTLFNCLS 60 MTQAQLAQG PLLAVRDVSVVFGGIIALNGVSFDM GQILGLIGPNGAGKTTLFNCLS Sbjct: 1 MTQAQLAQGTSPLLAVRDVSVVFGGIIALNGVSFDMHKGQILGLIGPNGAGKTTLFNCLS 60 Query: 61 RLYQPSSGDILMEGKSILSRPPHRIAEIGIGRTFQNVALFPNLSVIDNVRVGAHARTSSD 120 RLYQPSSGDILMEG SILSRPPHRIAEIGIGRTFQNVALFPNLSV+DNVRVGAH++TSSD Sbjct: 61 RLYQPSSGDILMEGASILSRPPHRIAEIGIGRTFQNVALFPNLSVMDNVRVGAHSKTSSD 120 Query: 121 IVSDSLRLAWVRRGETDMNKKVHDILGYLDLEDVAHTVVSGLPFGTQKRVELARALAADP 180 I+SDSLRLAWVRR E D+NKKV++IL YLDLE+VAHTVVSGLPFGTQKRVELARALAADP Sbjct: 121 IISDSLRLAWVRRSENDVNKKVYEILAYLDLEEVAHTVVSGLPFGTQKRVELARALAADP 180 Query: 181 KILLLDEPAGGLNHEEVYVLGDLIRKIRDDRKITVLLVEHHMGLVMSIADHVVALNFGRK 240 KILLLDEPAGGLNHEEVYVLGDLIR+IRDDR +TVLLVEHHMGLVMSIADHVVALNFG+K Sbjct: 181 KILLLDEPAGGLNHEEVYVLGDLIRRIRDDRHMTVLLVEHHMGLVMSIADHVVALNFGKK 240 Query: 241 LAEGTPAQVQADPDVIKAYLGSKDQ 265 LAEGTPAQVQADPDVIKAYLGSKDQ Sbjct: 241 LAEGTPAQVQADPDVIKAYLGSKDQ 265 >ref|YP_001203131.1| high-affinity branched-chain amino acid ABC transporter ATP-bincing protein [Bradyrhizobium sp. ORS 278] emb|CAL74894.1| High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) [Bradyrhizobium sp. ORS 278] Length = 265 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 242/265 (91%), Positives = 255/265 (96%) Query: 1 MTQAQLAQGNDPLLAVRDVSVVFGGIIALNGVSFDMRHGQILGLIGPNGAGKTTLFNCLS 60 MTQAQLAQ NDPLLAVRDVSVVFGGI+ALNGVSFDM+ GQILGLIGPNGAGKTTLFNCLS Sbjct: 1 MTQAQLAQTNDPLLAVRDVSVVFGGIVALNGVSFDMQKGQILGLIGPNGAGKTTLFNCLS 60 Query: 61 RLYQPSSGDILMEGKSILSRPPHRIAEIGIGRTFQNVALFPNLSVIDNVRVGAHARTSSD 120 RLYQPSSGDILMEG+SILSRPPHRIAEIGIGRTFQNVALFPNLSV+DNVRVG HARTSSD Sbjct: 61 RLYQPSSGDILMEGRSILSRPPHRIAEIGIGRTFQNVALFPNLSVLDNVRVGTHARTSSD 120 Query: 121 IVSDSLRLAWVRRGETDMNKKVHDILGYLDLEDVAHTVVSGLPFGTQKRVELARALAADP 180 I+SDSLRLAW+RR ET +N KVH+IL YL+LE+VAH VSGLPFGTQKRVELARALAADP Sbjct: 121 IISDSLRLAWIRRSETAVNTKVHEILAYLNLEEVAHKTVSGLPFGTQKRVELARALAADP 180 Query: 181 KILLLDEPAGGLNHEEVYVLGDLIRKIRDDRKITVLLVEHHMGLVMSIADHVVALNFGRK 240 KILLLDEPAGGLNHEEVYVLGDLIR+IRDDR ITVLLVEHHMGLVMSIA+HVVALNFGRK Sbjct: 181 KILLLDEPAGGLNHEEVYVLGDLIRRIRDDRHITVLLVEHHMGLVMSIANHVVALNFGRK 240 Query: 241 LAEGTPAQVQADPDVIKAYLGSKDQ 265 LAEGTPAQVQA+PDVIKAYLGSKDQ Sbjct: 241 LAEGTPAQVQANPDVIKAYLGSKDQ 265 >ref|YP_001242865.1| high-affinity branched-chain amino acid transport protein [Bradyrhizobium sp. BTAi1] gb|ABQ38959.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 265 Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust. Identities = 240/265 (90%), Positives = 252/265 (95%) Query: 1 MTQAQLAQGNDPLLAVRDVSVVFGGIIALNGVSFDMRHGQILGLIGPNGAGKTTLFNCLS 60 MTQAQLA+ +DPLLAVRDV+VVFGGI+AL GVSFDM GQILGLIGPNGAGKTTLFNCLS Sbjct: 1 MTQAQLARSSDPLLAVRDVNVVFGGIVALAGVSFDMHQGQILGLIGPNGAGKTTLFNCLS 60 Query: 61 RLYQPSSGDILMEGKSILSRPPHRIAEIGIGRTFQNVALFPNLSVIDNVRVGAHARTSSD 120 RLYQPS+GDILMEG+SILSRPPHRIAEIGIGRTFQNVALFPNLSV+DNVRVG HARTSSD Sbjct: 61 RLYQPSAGDILMEGRSILSRPPHRIAEIGIGRTFQNVALFPNLSVLDNVRVGTHARTSSD 120 Query: 121 IVSDSLRLAWVRRGETDMNKKVHDILGYLDLEDVAHTVVSGLPFGTQKRVELARALAADP 180 I+SDSLRLAWVRR E+ +N KV +IL YLDLE VAH VSGLPFGTQKRVELARALAADP Sbjct: 121 IISDSLRLAWVRRSESAVNTKVQEILAYLDLESVAHRTVSGLPFGTQKRVELARALAADP 180 Query: 181 KILLLDEPAGGLNHEEVYVLGDLIRKIRDDRKITVLLVEHHMGLVMSIADHVVALNFGRK 240 KILLLDEPAGGLNHEEVYVLGDLIR+IRDDRKITVLLVEHHMGLVMSIADHVVALNFGRK Sbjct: 181 KILLLDEPAGGLNHEEVYVLGDLIRRIRDDRKITVLLVEHHMGLVMSIADHVVALNFGRK 240 Query: 241 LAEGTPAQVQADPDVIKAYLGSKDQ 265 LAEGTPAQVQADPDVIKAYLGSKDQ Sbjct: 241 LAEGTPAQVQADPDVIKAYLGSKDQ 265 >ref|YP_485363.1| ABC transporter related [Rhodopseudomonas palustris HaA2] gb|ABD06452.1| ABC transporter related [Rhodopseudomonas palustris HaA2] Length = 265 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 228/265 (86%), Positives = 243/265 (91%) Query: 1 MTQAQLAQGNDPLLAVRDVSVVFGGIIALNGVSFDMRHGQILGLIGPNGAGKTTLFNCLS 60 M QA Q PLLAVRDVSVVFGGI+ALNG+SFDM+ GQILGLIGPNGAGKTTLFNCLS Sbjct: 1 MMQAHSGQTASPLLAVRDVSVVFGGIVALNGISFDMKKGQILGLIGPNGAGKTTLFNCLS 60 Query: 61 RLYQPSSGDILMEGKSILSRPPHRIAEIGIGRTFQNVALFPNLSVIDNVRVGAHARTSSD 120 RLYQPS GDIL+EG SIL+RPPHRIAE+GIGRTFQNVALFPNL+V+DNVRVG H+RT+SD Sbjct: 61 RLYQPSKGDILLEGDSILTRPPHRIAEVGIGRTFQNVALFPNLTVLDNVRVGTHSRTNSD 120 Query: 121 IVSDSLRLAWVRRGETDMNKKVHDILGYLDLEDVAHTVVSGLPFGTQKRVELARALAADP 180 IVSDSLRL W+R GE MNK+VH IL YL+L VAHTVVSGLPFGTQKRVELARALAA+P Sbjct: 121 IVSDSLRLPWIRNGEKAMNKRVHAILDYLELGSVAHTVVSGLPFGTQKRVELARALAAEP 180 Query: 181 KILLLDEPAGGLNHEEVYVLGDLIRKIRDDRKITVLLVEHHMGLVMSIADHVVALNFGRK 240 KILLLDEPAGGLNHEEVY+LGDLIRKIRDDR ITVLLVEHHMGLVMSIADHVVALNFGRK Sbjct: 181 KILLLDEPAGGLNHEEVYILGDLIRKIRDDRGITVLLVEHHMGLVMSIADHVVALNFGRK 240 Query: 241 LAEGTPAQVQADPDVIKAYLGSKDQ 265 LAEGTP QVQ DPDVIKAYLGSKDQ Sbjct: 241 LAEGTPTQVQNDPDVIKAYLGSKDQ 265 >ref|YP_570679.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB5] gb|ABE40778.1| ABC transporter related [Rhodopseudomonas palustris BisB5] Length = 265 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 228/265 (86%), Positives = 242/265 (91%) Query: 1 MTQAQLAQGNDPLLAVRDVSVVFGGIIALNGVSFDMRHGQILGLIGPNGAGKTTLFNCLS 60 M QA Q PLLAVRDVSVVFGGI+ALNG+SFDM+ GQILGLIGPNGAGKTTLFNCLS Sbjct: 1 MMQAHSGQHASPLLAVRDVSVVFGGIVALNGISFDMKKGQILGLIGPNGAGKTTLFNCLS 60 Query: 61 RLYQPSSGDILMEGKSILSRPPHRIAEIGIGRTFQNVALFPNLSVIDNVRVGAHARTSSD 120 RLYQPS GDIL+EG SIL+RP HRIAE GIGRTFQNVALFPNL+V+DNVRVGAH+RT+SD Sbjct: 61 RLYQPSKGDILLEGDSILTRPAHRIAEFGIGRTFQNVALFPNLTVLDNVRVGAHSRTNSD 120 Query: 121 IVSDSLRLAWVRRGETDMNKKVHDILGYLDLEDVAHTVVSGLPFGTQKRVELARALAADP 180 IVSDSLRL WVR GE MNK+V DILGYL+L D AHTVVSGLPFGTQKRVELARALA +P Sbjct: 121 IVSDSLRLPWVRNGEKAMNKRVDDILGYLELRDFAHTVVSGLPFGTQKRVELARALATEP 180 Query: 181 KILLLDEPAGGLNHEEVYVLGDLIRKIRDDRKITVLLVEHHMGLVMSIADHVVALNFGRK 240 KILLLDEPAGGLNHEEVY+LGDLIRKIRDDR ITVLLVEHHMGLVMSIADHVVALNFGRK Sbjct: 181 KILLLDEPAGGLNHEEVYILGDLIRKIRDDRGITVLLVEHHMGLVMSIADHVVALNFGRK 240 Query: 241 LAEGTPAQVQADPDVIKAYLGSKDQ 265 LAEGTP +VQ DPDVIKAYLGSKDQ Sbjct: 241 LAEGTPTEVQNDPDVIKAYLGSKDQ 265