BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0070.0009.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774462.1| transcriptional regulator [Bradyrhizobium japon... 251 2e-65 ref|YP_001242864.1| IclR family transcriptional regulator [Brady... 251 2e-65 ref|YP_782690.1| IclR family transcriptional regulator [Rhodopse... 249 1e-64 ref|YP_532098.1| IclR family transcriptional regulator [Rhodopse... 248 3e-64 ref|YP_485364.1| IclR family transcriptional regulator [Rhodopse... 243 9e-63 >ref|NP_774462.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC53087.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 317 Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 118/154 (76%), Positives = 134/154 (87%) Query: 1 VQLDVGSRVPIATTAMGRAYIWALPPDERAALLRELRDHYGSRWAKMRDGIERSGETVAK 60 VQLDVGSRVPIAT+AMGRAY WAL ++RA L R LR+HYGSRW KMRDG+ERSGETVAK Sbjct: 164 VQLDVGSRVPIATSAMGRAYFWALADEDRAELSRVLREHYGSRWPKMRDGLERSGETVAK 223 Query: 61 HGFTMSAGDWQNDVAAVGVALRLNDGTGPYAFNCGAPAFRFTEDRLLNDIGPRLVAMVRN 120 +GF +S GDW +D+ A GVAL+LNDGTGPYAFNCGAPAFRFTE+RL+NDIGPRL+AMVRN Sbjct: 224 YGFAISVGDWHDDIGAAGVALKLNDGTGPYAFNCGAPAFRFTEERLINDIGPRLLAMVRN 283 Query: 121 IEQALGGMAPQSKKEERKKTRVGGKVARLAEGIR 154 IE ALGG+ P SKKE KK + GGKVAR+AEG R Sbjct: 284 IEAALGGLMPHSKKEVSKKLKSGGKVARVAEGFR 317 >ref|YP_001242864.1| IclR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ38958.1| transcriptional regulator, IclR family [Bradyrhizobium sp. BTAi1] Length = 273 Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 120/157 (76%), Positives = 140/157 (89%), Gaps = 3/157 (1%) Query: 1 VQLDVGSRVPIATTAMGRAYIWALPPDERAALLRELRDHYGSRWAKMRDGIERSGETVAK 60 VQLDVGSR+PIATTAMGRAYIWAL +ERA L+RELR+HYGSRW K+R+GIERSGETVA+ Sbjct: 117 VQLDVGSRIPIATTAMGRAYIWALSEEERAVLMRELREHYGSRWPKIREGIERSGETVAR 176 Query: 61 HGFTMSAGDWQNDVAAVGVALRLNDGTGPYAFNCGAPAFRFTEDRLLNDIGPRLVAMVRN 120 +GFT+SAG+WQ+DV AVGVA++LNDGTGPYAFNCGAPAFRFTE+RL DIGPRL+AMVRN Sbjct: 177 YGFTISAGEWQDDVHAVGVAMKLNDGTGPYAFNCGAPAFRFTEERLRTDIGPRLLAMVRN 236 Query: 121 IEQALGGMAP---QSKKEERKKTRVGGKVARLAEGIR 154 IE A+GG+AP Q KE KK + GGK+AR+AEGIR Sbjct: 237 IEAAVGGLAPATNQPNKEPSKKQKPGGKLARVAEGIR 273 >ref|YP_782690.1| IclR family transcriptional regulator [Rhodopseudomonas palustris BisA53] gb|ABJ07710.1| transcriptional regulator, IclR family [Rhodopseudomonas palustris BisA53] Length = 286 Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 118/152 (77%), Positives = 135/152 (88%), Gaps = 1/152 (0%) Query: 1 VQLDVGSRVPIATTAMGRAYIWALPPDERAALLRELRDHYGSRWAKMRDGIERSGETVAK 60 VQLDVGSRVPIATTAMGRAY+WALP DERAALLR+LR+HYGSRW+KM+DGIER+GE +AK Sbjct: 135 VQLDVGSRVPIATTAMGRAYLWALPDDERAALLRDLREHYGSRWSKMKDGIERAGEMIAK 194 Query: 61 HGFTMSAGDWQNDVAAVGVALRLNDGTGPYAFNCGAPAFRFTEDRLLNDIGPRLVAMVRN 120 GF +SAG+WQ+D+ A GVALRLNDGTGPYAFNCGAPAFRFTE+RLLNDIGPRL+AMVRN Sbjct: 195 RGFAISAGEWQDDIGAAGVALRLNDGTGPYAFNCGAPAFRFTEERLLNDIGPRLLAMVRN 254 Query: 121 IEQALGG-MAPQSKKEERKKTRVGGKVARLAE 151 IE ALG + P +KK KKTR GG +AR+ E Sbjct: 255 IETALGSHVPPPAKKTANKKTRPGGNIARMVE 286 >ref|YP_532098.1| IclR family transcriptional regulator [Rhodopseudomonas palustris BisB18] gb|ABD87779.1| transcriptional regulator, IclR family [Rhodopseudomonas palustris BisB18] Length = 292 Score = 248 bits (632), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 120/155 (77%), Positives = 136/155 (87%), Gaps = 1/155 (0%) Query: 1 VQLDVGSRVPIATTAMGRAYIWALPPDERAALLRELRDHYGSRWAKMRDGIERSGETVAK 60 VQLDVGSRVPIATTAMGRAY+WAL DERAALLR+LR+HYGSRW+K++DGIERSGE VAK Sbjct: 138 VQLDVGSRVPIATTAMGRAYLWALADDERAALLRDLREHYGSRWSKLKDGIERSGELVAK 197 Query: 61 HGFTMSAGDWQNDVAAVGVALRLNDGTGPYAFNCGAPAFRFTEDRLLNDIGPRLVAMVRN 120 GF +SAG+WQ+DV A GV+L+LNDGTGPYAFNCGAPAFRFTEDRL+NDIGPRLVAMVRN Sbjct: 198 RGFAISAGEWQDDVHAAGVSLKLNDGTGPYAFNCGAPAFRFTEDRLINDIGPRLVAMVRN 257 Query: 121 IEQALGG-MAPQSKKEERKKTRVGGKVARLAEGIR 154 IE ALGG AP +K + KT+ GGK AR+ EG R Sbjct: 258 IEAALGGKAAPPPRKTDNNKTKPGGKGARVVEGTR 292 >ref|YP_485364.1| IclR family transcriptional regulator [Rhodopseudomonas palustris HaA2] gb|ABD06453.1| transcriptional regulator, IclR family [Rhodopseudomonas palustris HaA2] Length = 292 Score = 243 bits (619), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 119/158 (75%), Positives = 136/158 (86%), Gaps = 4/158 (2%) Query: 1 VQLDVGSRVPIATTAMGRAYIWALPPDERAALLRELRDHYGSRWAKMRDGIERSGETVAK 60 VQLDVGSR+PIATTAMGRAY+ AL DERA+LLR++R+HYGSRW ++++GIERS E VAK Sbjct: 135 VQLDVGSRIPIATTAMGRAYLCALQGDERASLLRDMREHYGSRWPRIKEGIERSEEMVAK 194 Query: 61 HGFTMSAGDWQNDVAAVGVALRLNDGTGPYAFNCGAPAFRFTEDRLLNDIGPRLVAMVRN 120 HGF +S G+WQ+DV A GVAL LNDGTGPYAFNCGAPAFRFTEDRLLNDIGPRLVAMVR Sbjct: 195 HGFAISVGEWQDDVHAAGVALTLNDGTGPYAFNCGAPAFRFTEDRLLNDIGPRLVAMVRK 254 Query: 121 IEQALGGM-APQSK---KEERKKTRVGGKVARLAEGIR 154 IE ALGG APQS+ K + KKT+ GGKVAR+ EGIR Sbjct: 255 IEAALGGTAAPQSRRPDKSDNKKTKSGGKVARVVEGIR 292