BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0070.0006.p (511 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774461.1| fatty oxidation complex subunit alpha [Bradyrhi... 965 0.0 ref|YP_001242863.1| 3-hydroxyacyl-CoA dehydrogenase / short chai... 951 0.0 ref|YP_001203133.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydr... 946 0.0 ref|YP_001993209.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudo... 906 0.0 ref|NP_949054.1| enoyl-CoA hydratase [Rhodopseudomonas palustris... 905 0.0 >ref|NP_774461.1| fatty oxidation complex subunit alpha [Bradyrhizobium japonicum USDA 110] dbj|BAC53086.1| bll7821 [Bradyrhizobium japonicum USDA 110] Length = 698 Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust. Identities = 476/501 (95%), Positives = 489/501 (97%) Query: 1 VLAEKRPLRKLRDDDSKLAAAKADRSIFTNAVAALTKKSRGLEAPFAAADAVGAAIDLPF 60 +LAEKRPLR+LRDDDSKLAAAKADRSIFTNAVAA+TKKSRGLEAPFAAADAVG AID PF Sbjct: 188 LLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKSRGLEAPFAAADAVGYAIDFPF 247 Query: 61 DEGLKKEREGFLKLMNGDQSKAQRYAFFAEREAAKISGVPEGTKGRNVARVAILGAGTMG 120 DEGLKKEREGFLKL+ DQSKAQRYAFFAEREAAKI+GVPEGTK R V RVAILGAGTMG Sbjct: 248 DEGLKKEREGFLKLVASDQSKAQRYAFFAEREAAKIAGVPEGTKSRPVNRVAILGAGTMG 307 Query: 121 GGIAMSFANAGIPVTLIETGEEQLKRGMGIMQKNYEATAARGGIPADAPAKRMALINGVV 180 GGIAMSFANAG+PVTLIETGEEQLKRG+GIMQKN+EATAARGGIPADAPAKRMALI GVV Sbjct: 308 GGIAMSFANAGVPVTLIETGEEQLKRGLGIMQKNWEATAARGGIPADAPAKRMALITGVV 367 Query: 181 GIENVGDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDEIAKSTKRPQD 240 GIENVGDADLVIEAVFETMAVKKEVFGKLDQ+AKPGAVLASNTSYLNIDEIAKSTKRPQD Sbjct: 368 GIENVGDADLVIEAVFETMAVKKEVFGKLDQFAKPGAVLASNTSYLNIDEIAKSTKRPQD 427 Query: 241 VLGMHFFSPANVMKLCEIVRADKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQ 300 VLGMHFFSPANVMKLCEIVRADKTAPDALVTAV+IARKIAKVPAVVGVCDGFVGNRMLAQ Sbjct: 428 VLGMHFFSPANVMKLCEIVRADKTAPDALVTAVTIARKIAKVPAVVGVCDGFVGNRMLAQ 487 Query: 301 RGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL 360 RGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL Sbjct: 488 RGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL 547 Query: 361 CEAGRFGQKTGKGYYKYEPGSRAALPDPEVEKLIDETLARLGRKKRVVSDDEILERMMYP 420 CEAGRFGQKTGKGYYKYE GSR+ALPDPEVEKLIDETLARLGRKKR VSD+EILERMMYP Sbjct: 548 CEAGRFGQKTGKGYYKYEAGSRSALPDPEVEKLIDETLARLGRKKRAVSDEEILERMMYP 607 Query: 421 MINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLAFYAKET 480 MINEGAKIL EGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRL+FYAKET Sbjct: 608 MINEGAKILEEGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLSFYAKET 667 Query: 481 NDPSLEPAPLLKKLADEGKTF 501 NDPSLEPAPLLKKLA EGKTF Sbjct: 668 NDPSLEPAPLLKKLAAEGKTF 688 >ref|YP_001242863.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase [Bradyrhizobium sp. BTAi1] gb|ABQ38957.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 697 Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/505 (92%), Positives = 488/505 (96%) Query: 1 VLAEKRPLRKLRDDDSKLAAAKADRSIFTNAVAALTKKSRGLEAPFAAADAVGAAIDLPF 60 V+AE RPLRKLRDDDSKLAAAKADRSIFTNAVAA+TKKSRGLEAPFAAADAVG AIDLPF Sbjct: 188 VVAENRPLRKLRDDDSKLAAAKADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPF 247 Query: 61 DEGLKKEREGFLKLMNGDQSKAQRYAFFAEREAAKISGVPEGTKGRNVARVAILGAGTMG 120 DEGLK+EREGFLKL+ DQSKAQRYAFFAEREAAKI+GVPEGTKGR V RVAI+GAGTMG Sbjct: 248 DEGLKREREGFLKLLTSDQSKAQRYAFFAEREAAKIAGVPEGTKGRKVDRVAIIGAGTMG 307 Query: 121 GGIAMSFANAGIPVTLIETGEEQLKRGMGIMQKNYEATAARGGIPADAPAKRMALINGVV 180 GGIAMSFANAGIPVTLIET EEQLKRGMG+MQKN+EATAARGGIPADAPAKRMALI+G V Sbjct: 308 GGIAMSFANAGIPVTLIETAEEQLKRGMGVMQKNWEATAARGGIPADAPAKRMALIDGKV 367 Query: 181 GIENVGDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDEIAKSTKRPQD 240 G+E+V DADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNID IA T RPQD Sbjct: 368 GLEHVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQD 427 Query: 241 VLGMHFFSPANVMKLCEIVRADKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQ 300 VLGMHFFSPANVMKLCEIVRA+KTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQ Sbjct: 428 VLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQ 487 Query: 301 RGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL 360 RGKQ+EKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL Sbjct: 488 RGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL 547 Query: 361 CEAGRFGQKTGKGYYKYEPGSRAALPDPEVEKLIDETLARLGRKKRVVSDDEILERMMYP 420 CEAGRFGQKTGKGYYKYE GSRA LPDP+VEKLIDETLA+LG K+R VSD+EILERMMYP Sbjct: 548 CEAGRFGQKTGKGYYKYEAGSRAPLPDPDVEKLIDETLAKLGLKRRAVSDEEILERMMYP 607 Query: 421 MINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLAFYAKET 480 MINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPM+WAD+VGLKHIA+RLAFYAKET Sbjct: 608 MINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMYWADSVGLKHIAERLAFYAKET 667 Query: 481 NDPSLEPAPLLKKLADEGKTFASLA 505 NDPSLEPAPLLKKLADEGKTFASLA Sbjct: 668 NDPSLEPAPLLKKLADEGKTFASLA 692 >ref|YP_001203133.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL74896.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 697 Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/505 (91%), Positives = 487/505 (96%) Query: 1 VLAEKRPLRKLRDDDSKLAAAKADRSIFTNAVAALTKKSRGLEAPFAAADAVGAAIDLPF 60 V+AE RPLRKLRDDDSK+AAAKADRSIFTNAVAA+TKKSRGLEAPFAAADAVG AIDLPF Sbjct: 188 VVAENRPLRKLRDDDSKIAAAKADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPF 247 Query: 61 DEGLKKEREGFLKLMNGDQSKAQRYAFFAEREAAKISGVPEGTKGRNVARVAILGAGTMG 120 DEGLK+EREGFLKL+ DQSKAQRYAFFAEREAAKI+GVPEGTKGR + RVAI+GAGTMG Sbjct: 248 DEGLKREREGFLKLLTSDQSKAQRYAFFAEREAAKIAGVPEGTKGRKIERVAIIGAGTMG 307 Query: 121 GGIAMSFANAGIPVTLIETGEEQLKRGMGIMQKNYEATAARGGIPADAPAKRMALINGVV 180 GGIAMSFANAGIPVTLIET EEQLKRGMGIMQKN+EATAARGGIPADAPAKRMALI+G V Sbjct: 308 GGIAMSFANAGIPVTLIETAEEQLKRGMGIMQKNWEATAARGGIPADAPAKRMALIDGKV 367 Query: 181 GIENVGDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDEIAKSTKRPQD 240 G+ENV DADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNID IA T RPQD Sbjct: 368 GLENVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQD 427 Query: 241 VLGMHFFSPANVMKLCEIVRADKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQ 300 VLGMHFFSPANVMKLCEIVRA+KTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQ Sbjct: 428 VLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQ 487 Query: 301 RGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL 360 RGKQ+EKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL Sbjct: 488 RGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL 547 Query: 361 CEAGRFGQKTGKGYYKYEPGSRAALPDPEVEKLIDETLARLGRKKRVVSDDEILERMMYP 420 CEAGRFGQKTGKGYYKYE GSRA LPDP+VEKLIDETLA+LG K+R VSD+EILERMMYP Sbjct: 548 CEAGRFGQKTGKGYYKYEAGSRAPLPDPDVEKLIDETLAKLGLKRRNVSDEEILERMMYP 607 Query: 421 MINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLAFYAKET 480 MINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPM+WAD+VGLK IA+RL++YAKET Sbjct: 608 MINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMYWADSVGLKQIAERLSYYAKET 667 Query: 481 NDPSLEPAPLLKKLADEGKTFASLA 505 NDPSLEPAPLLK+LADEGKTFASLA Sbjct: 668 NDPSLEPAPLLKRLADEGKTFASLA 692 >ref|YP_001993209.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas palustris TIE-1] gb|ACF02734.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Rhodopseudomonas palustris TIE-1] Length = 699 Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/511 (86%), Positives = 479/511 (93%) Query: 1 VLAEKRPLRKLRDDDSKLAAAKADRSIFTNAVAALTKKSRGLEAPFAAADAVGAAIDLPF 60 VLAEKRPLR+LRDDDSKLAAAKADRSIFTNAVAA+TKK+RGLEAPFA ADA+GAAIDLPF Sbjct: 188 VLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKARGLEAPFACADAIGAAIDLPF 247 Query: 61 DEGLKKEREGFLKLMNGDQSKAQRYAFFAEREAAKISGVPEGTKGRNVARVAILGAGTMG 120 +EGLKKEREGF+KL+ DQSKAQRYAFFAEREAAK+ GVP+GTK R V+RVAI+GAGTMG Sbjct: 248 EEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVDGVPDGTKPRAVSRVAIIGAGTMG 307 Query: 121 GGIAMSFANAGIPVTLIETGEEQLKRGMGIMQKNYEATAARGGIPADAPAKRMALINGVV 180 GGIAMSFANAGIPVTLIETGEEQLKRG+GIMQKN+EATAARGG+P DAPAKRMALI GVV Sbjct: 308 GGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNWEATAARGGLPPDAPAKRMALITGVV 367 Query: 181 GIENVGDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDEIAKSTKRPQD 240 G+ENV DADL+IEAVFETMAVKKEVF +D +AKPGAVLASNTSYL+IDEIA +TKRPQD Sbjct: 368 GLENVKDADLIIEAVFETMAVKKEVFTAIDAHAKPGAVLASNTSYLSIDEIAATTKRPQD 427 Query: 241 VLGMHFFSPANVMKLCEIVRADKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQ 300 VLGMHFFSPANVMKLCEIVR KTAPDAL+TAVSIA+KIAKVP VVGVCDGFVGNRMLA Sbjct: 428 VLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVVVGVCDGFVGNRMLAA 487 Query: 301 RGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL 360 R KQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL Sbjct: 488 RSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL 547 Query: 361 CEAGRFGQKTGKGYYKYEPGSRAALPDPEVEKLIDETLARLGRKKRVVSDDEILERMMYP 420 CEAGRFGQKTGKGYYKYE GSRA +PDPEVE LI++TLA+LG K+R ++D+EILERM+YP Sbjct: 548 CEAGRFGQKTGKGYYKYEQGSRAPMPDPEVETLINDTLAKLGLKRRDITDEEILERMVYP 607 Query: 421 MINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLAFYAKET 480 MINEGA+IL E IAARPSDIDVVWLYGYGWPIYRGGPM +AD+VGLKHIA+RL+ YAK T Sbjct: 608 MINEGARILEEKIAARPSDIDVVWLYGYGWPIYRGGPMHYADSVGLKHIAERLSAYAKAT 667 Query: 481 NDPSLEPAPLLKKLADEGKTFASLAAPSKAA 511 NDPSLEPAPLL +LA EGKTFASL P+KAA Sbjct: 668 NDPSLEPAPLLARLAAEGKTFASLTQPTKAA 698 >ref|NP_949054.1| enoyl-CoA hydratase [Rhodopseudomonas palustris CGA009] emb|CAE29158.1| enoyl-CoA hydratase [Rhodopseudomonas palustris CGA009] Length = 699 Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/511 (86%), Positives = 479/511 (93%) Query: 1 VLAEKRPLRKLRDDDSKLAAAKADRSIFTNAVAALTKKSRGLEAPFAAADAVGAAIDLPF 60 VLAEKRPLR+LRDDDSKLAAAKADRSIFTNAVAA+TKK+RGLEAPFA ADA+GAAIDLPF Sbjct: 188 VLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKARGLEAPFACADAIGAAIDLPF 247 Query: 61 DEGLKKEREGFLKLMNGDQSKAQRYAFFAEREAAKISGVPEGTKGRNVARVAILGAGTMG 120 +EGLKKEREGF+KL+ DQSKAQRYAFFAEREAAK+ GVP+GTK R V+RVAI+GAGTMG Sbjct: 248 EEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVDGVPDGTKPRPVSRVAIIGAGTMG 307 Query: 121 GGIAMSFANAGIPVTLIETGEEQLKRGMGIMQKNYEATAARGGIPADAPAKRMALINGVV 180 GGIAMSFANAGIPVTLIETGEEQLKRG+GIMQKN+EATAARGG+P DAPAKRMALI G+V Sbjct: 308 GGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNWEATAARGGLPPDAPAKRMALITGLV 367 Query: 181 GIENVGDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDEIAKSTKRPQD 240 G+ENV DADL+IEAVFETMAVKKEVF +D +AKPGAVLASNTSYL+IDEIA +TKRPQD Sbjct: 368 GLENVKDADLIIEAVFETMAVKKEVFTAVDAHAKPGAVLASNTSYLSIDEIAATTKRPQD 427 Query: 241 VLGMHFFSPANVMKLCEIVRADKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQ 300 VLGMHFFSPANVMKLCEIVR KTAPDAL+TAVSIA+KIAKVP VVGVCDGFVGNRMLA Sbjct: 428 VLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVVVGVCDGFVGNRMLAA 487 Query: 301 RGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL 360 R KQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL Sbjct: 488 RSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIKSEIADAL 547 Query: 361 CEAGRFGQKTGKGYYKYEPGSRAALPDPEVEKLIDETLARLGRKKRVVSDDEILERMMYP 420 CEAGRFGQKTGKGYYKYE GSRA +PDPEVE LI++TLA+LG K+R ++D+EILERM+YP Sbjct: 548 CEAGRFGQKTGKGYYKYEQGSRAPMPDPEVETLINDTLAKLGLKRRDITDEEILERMVYP 607 Query: 421 MINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLAFYAKET 480 MINEGA+IL E IAARPSDIDVVWLYGYGWPIYRGGPM +AD+VGLKHIA+RL+ YAK T Sbjct: 608 MINEGARILEEKIAARPSDIDVVWLYGYGWPIYRGGPMHYADSVGLKHIAERLSAYAKAT 667 Query: 481 NDPSLEPAPLLKKLADEGKTFASLAAPSKAA 511 NDPSLEPAPLL +LA EGKTFASL PSKAA Sbjct: 668 NDPSLEPAPLLARLAAEGKTFASLTQPSKAA 698