BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0069.0018.p (468 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766708.1| exonuclease I [Bradyrhizobium japonicum USDA 11... 957 0.0 ref|YP_001603131.1| exodeoxyribonuclease I [Gluconacetobacter di... 714 0.0 ref|ZP_07025961.1| Exodeoxyribonuclease I [Afipia sp. 1NLS2] >gi... 627 e-177 ref|YP_001413096.1| exodeoxyribonuclease I [Parvibaculum lavamen... 598 e-169 ref|YP_781392.1| exodeoxyribonuclease I [Rhodopseudomonas palust... 581 e-164 >ref|NP_766708.1| exonuclease I [Bradyrhizobium japonicum USDA 110] dbj|BAC45333.1| exonuclease I [Bradyrhizobium japonicum USDA 110] Length = 468 Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/468 (99%), Positives = 467/468 (99%) Query: 1 MSFVFFDTETTGLKRGFDQILHFAAVRTDENLNEVARFETRSRLQPHVLPHPSALRTNGL 60 MSFVFFDTETTGLKRGFDQILHFAAVRTDENLNEVARFETRSRLQPHVLPHPSALRTNGL Sbjct: 1 MSFVFFDTETTGLKRGFDQILHFAAVRTDENLNEVARFETRSRLQPHVLPHPSALRTNGL 60 Query: 61 PIESLTDSSLPSHYTMVEDIRRTLISWSPAVFVGFNSIRFDEEMLRHALFQCLYPAYLTS 120 PIESLTDSSLPSHYTMV DIRRTLISWSPAVFVGFNSIRFDEEMLRHALFQCLYPAYLTS Sbjct: 61 PIESLTDSSLPSHYTMVGDIRRTLISWSPAVFVGFNSIRFDEEMLRHALFQCLYPAYLTS 120 Query: 121 NHRNCRADALSLVMAADAVSPAQLVVPVSEEGRRTFRLQQLAAANGVAHARAHDAMSDVL 180 NHRNCRADALSLVMAADAVSPAQLVVPVSEEGRRTFRLQQLAAANGVAHARAHDAMSDVL Sbjct: 121 NHRNCRADALSLVMAADAVSPAQLVVPVSEEGRRTFRLQQLAAANGVAHARAHDAMSDVL 180 Query: 181 ATLELSRLVYRRSPELWQRFVRFSNKATVADFIEVEDGFVLTEFFGGQAYHTSVVCIGRD 240 ATLELSRLVYRRSPELWQRFVRFSNKATVADFIEVEDGFVLTEFFGGQAYHTSVVCIGRD Sbjct: 181 ATLELSRLVYRRSPELWQRFVRFSNKATVADFIEVEDGFVLTEFFGGQAYHTSVVCIGRD 240 Query: 241 PDQANGRLCLSLNEDMGRLAAMSDLELQVHLTQKPSPIRRFRINAAPTLTAFYDAPEHML 300 PDQANGRLCLSLNEDMGRLAAMSDLELQVHLTQKPSPIRRFRINAAPTLTAFYDAPEHML Sbjct: 241 PDQANGRLCLSLNEDMGRLAAMSDLELQVHLTQKPSPIRRFRINAAPTLTAFYDAPEHML 300 Query: 301 DGGSMGATGDRACLMKADTGLCARLVAAYMAAREPYALSPHLEERIYSGFPGPADEARIA 360 DGGSMGATGDRACLMKADTGLCARLVAAYMAAREPYALSPHLEERIYSGFPGPADEARIA Sbjct: 301 DGGSMGATGDRACLMKADTGLCARLVAAYMAAREPYALSPHLEERIYSGFPGPADEARIA 360 Query: 361 AFHDARWEDRLAIVQGMEDERLRWFGLRLIYFEARSVLPEPTRLEVERYLTDQMTGDGSG 420 AFHDARWEDRLAIVQGMEDERLRWFGLRLIYFEARSVLPEPTRLEVERYLTDQMTGDGSG Sbjct: 361 AFHDARWEDRLAIVQGMEDERLRWFGLRLIYFEARSVLPEPTRLEVERYLTDQMTGDGSG 420 Query: 421 CLTIDQAMAETERVLGEFASPDDLLIQYRTYLQDRLARLEAYRTRLIA 468 CLTIDQAMAETERVLGEFASPDDLLIQYRTYLQDRLARLEAYRTRLIA Sbjct: 421 CLTIDQAMAETERVLGEFASPDDLLIQYRTYLQDRLARLEAYRTRLIA 468 >ref|YP_001603131.1| exodeoxyribonuclease I [Gluconacetobacter diazotrophicus PAl 5] emb|CAP56840.1| putative exodeoxyribonuclease I [Gluconacetobacter diazotrophicus PAl 5] Length = 437 Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/436 (77%), Positives = 382/436 (87%) Query: 32 LNEVARFETRSRLQPHVLPHPSALRTNGLPIESLTDSSLPSHYTMVEDIRRTLISWSPAV 91 +NEVARFE RSRLQPHVLPHPSALRTNGL IESLTD++LPSHY MV DIRR L+SWSPAV Sbjct: 1 MNEVARFEARSRLQPHVLPHPSALRTNGLSIESLTDTNLPSHYAMVGDIRRILMSWSPAV 60 Query: 92 FVGFNSIRFDEEMLRHALFQCLYPAYLTSNHRNCRADALSLVMAADAVSPAQLVVPVSEE 151 FVGFNSIRFDEEMLRHALFQCLYPAYLTSNHRNCRADALSLVMAADAVSPAQLVVPVSEE Sbjct: 61 FVGFNSIRFDEEMLRHALFQCLYPAYLTSNHRNCRADALSLVMAADAVSPAQLVVPVSEE 120 Query: 152 GRRTFRLQQLAAANGVAHARAHDAMSDVLATLELSRLVYRRSPELWQRFVRFSNKATVAD 211 GRRTFRLQQLAAANG+ HARAHDAMSDVLAT+EL RLV++RSP+LWQRFVRFSNKATV+D Sbjct: 121 GRRTFRLQQLAAANGLVHARAHDAMSDVLATIELCRLVHQRSPDLWQRFVRFSNKATVSD 180 Query: 212 FIEVEDGFVLTEFFGGQAYHTSVVCIGRDPDQANGRLCLSLNEDMGRLAAMSDLELQVHL 271 F++ EDGFVLTEF+GGQAYH VVCIG DPDQANGRLCLSL D+G+LA MSD+ELQ HL Sbjct: 181 FVDAEDGFVLTEFYGGQAYHAPVVCIGVDPDQANGRLCLSLYHDVGQLARMSDVELQAHL 240 Query: 272 TQKPSPIRRFRINAAPTLTAFYDAPEHMLDGGSMGATGDRACLMKADTGLCARLVAAYMA 331 QKPSPIRRFRINAAPTLTAF+DAPEHMLDGGS+G D+A +KAD LC RLVAAY+A Sbjct: 241 AQKPSPIRRFRINAAPTLTAFFDAPEHMLDGGSIGHIEDQARRVKADADLCTRLVAAYIA 300 Query: 332 AREPYALSPHLEERIYSGFPGPADEARIAAFHDARWEDRLAIVQGMEDERLRWFGLRLIY 391 AREPY LSPHLEERIY+GFPGP DE R+ AFH W DRL+IVQ +EDERLRWFGLRL+Y Sbjct: 301 AREPYPLSPHLEERIYNGFPGPDDEGRMNAFHQVSWPDRLSIVQSLEDERLRWFGLRLVY 360 Query: 392 FEARSVLPEPTRLEVERYLTDQMTGDGSGCLTIDQAMAETERVLGEFASPDDLLIQYRTY 451 FEAR VLP ++E+ER L +Q+ GDGSGCLT + A+AET +++G+ D LL +YR Y Sbjct: 361 FEARRVLPATVKVEIERRLANQLAGDGSGCLTYELALAETNKLMGQQTDHDGLLARYRIY 420 Query: 452 LQDRLARLEAYRTRLI 467 LQDR A+ A+R +++ Sbjct: 421 LQDRSAQAAAFRAQMV 436 >ref|ZP_07025961.1| Exodeoxyribonuclease I [Afipia sp. 1NLS2] gb|EFI53103.1| Exodeoxyribonuclease I [Afipia sp. 1NLS2] Length = 473 Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust. Identities = 310/469 (66%), Positives = 363/469 (77%), Gaps = 1/469 (0%) Query: 1 MSFVFFDTETTGLKRGFDQILHFAAVRTDENLNEVARFETRSRLQPHVLPHPSALRTNGL 60 +SFVFFDTETTGLK GFDQI+HFAA+RTD NLNE+ RFE RSRL PHVLPHP+ALRTNGL Sbjct: 4 LSFVFFDTETTGLKHGFDQIVHFAAIRTDANLNEIGRFEARSRLLPHVLPHPAALRTNGL 63 Query: 61 PIESLTDSSLPSHYTMVEDIRRTLISWSPAVFVGFNSIRFDEEMLRHALFQCLYPAYLTS 120 PI L D SLPSHY MV IR+ L+SWSP++F+G+NS+RFDEEMLRHALFQ L+PAYLTS Sbjct: 64 PIGRLLDGSLPSHYDMVRSIRQRLLSWSPSIFLGYNSVRFDEEMLRHALFQTLHPAYLTS 123 Query: 121 NHRNCRADALSLVMAADAVSPAQLVVPVSEEGRRTFRLQQLAAANGVAHARAHDAMSDVL 180 NH N RAD LVMAA AVSPA L VP+ EGR FRL+QLA ANGVA +AHDA+SD + Sbjct: 124 NHNNSRADVWGLVMAAAAVSPACLNVPIGPEGRSIFRLEQLALANGVAQEQAHDALSDAI 183 Query: 181 ATLELSRLVYRRSPELWQRFVRFSNKATVADFIEVEDGFVLTEFFGGQAYHTSVVCIGRD 240 ATLEL RLV++RSPELWQRFVRFS KATVADF+E EDGF+LTEFF QAYH VVCIGRD Sbjct: 184 ATLELCRLVHQRSPELWQRFVRFSKKATVADFVEAEDGFMLTEFFANQAYHAPVVCIGRD 243 Query: 241 PDQANGRLCLSLNEDMGRLAAMSDLELQVHLTQKPSPIRRFRINAAPTLTAFYDAPEHML 300 PDQ+NGR CL+LN D R AAM+D EL+ L QKP P+RR RINAAPTLTAFYDAPE ML Sbjct: 244 PDQSNGRFCLNLNRDADRFAAMTDDELRAELAQKPCPVRRLRINAAPTLTAFYDAPEVML 303 Query: 301 DGGSMGATGDRACLMKADTGLCARLVAAYMAAREPYALSPHLEERIYSGFPGPADEARIA 360 DG + A RA +K+D LC RLV+AY + REP + S H EER+Y GFPGP DEAR+ Sbjct: 304 DGLDIDAVEARARRVKSDPALCNRLVSAYTSTREPRSPSRHAEERLYDGFPGPQDEARMI 363 Query: 361 AFHDARWEDRLAIVQGMEDERLRWFGLRLIYFEARSVLPEPTRLEVERYLTDQMTGDGSG 420 FHDA W DRLAIVQ ++DERLR FGLRL+YFEARSVLPE RLE++ L+ ++ +G Sbjct: 364 EFHDADWTDRLAIVQSLDDERLRSFGLRLLYFEARSVLPEALRLELDYALSGRLVDAEAG 423 Query: 421 CLTIDQAMAETERVLGEFAS-PDDLLIQYRTYLQDRLARLEAYRTRLIA 468 LT++QA+ + + AS LL YRTYL R+ R+ +R + A Sbjct: 424 GLTLEQALRAIDEAPSDDASDAAGLLTGYRTYLVGRMERVADFRAKQFA 472 >ref|YP_001413096.1| exodeoxyribonuclease I [Parvibaculum lavamentivorans DS-1] gb|ABS63439.1| Exodeoxyribonuclease I [Parvibaculum lavamentivorans DS-1] Length = 468 Score = 598 bits (1541), Expect = e-169, Method: Compositional matrix adjust. Identities = 293/464 (63%), Positives = 353/464 (76%), Gaps = 1/464 (0%) Query: 1 MSFVFFDTETTGLKRGFDQILHFAAVRTDENLNEVARFETRSRLQPHVLPHPSALRTNGL 60 MSFVFFDTETTGL+ GFDQI+HFAA+RTD +LNE+ RFE SRL PHV+PHP AL TNGL Sbjct: 1 MSFVFFDTETTGLRHGFDQIVHFAAIRTDADLNEIDRFEAHSRLLPHVVPHPFALYTNGL 60 Query: 61 PIESLTDSSLPSHYTMVEDIRRTLISWSPAVFVGFNSIRFDEEMLRHALFQCLYPAYLTS 120 I LTD LPSHY MV+ IRR L+SWSP++FVG+NSIRFDEEMLR A FQ L+PAYLTS Sbjct: 61 SIGRLTDDGLPSHYVMVQTIRRKLLSWSPSIFVGYNSIRFDEEMLRQAFFQTLHPAYLTS 120 Query: 121 NHRNCRADALSLVMAADAVSPAQLVVPVSEEGRRTFRLQQLAAANGVAHARAHDAMSDVL 180 NH NCRADAL L+ AA A+SP+ L+VP GR TFRL+QLA+ANG+ H RAHDAM+DVL Sbjct: 121 NHGNCRADALGLMTAAAALSPSCLLVPFGATGRPTFRLEQLASANGIEHTRAHDAMADVL 180 Query: 181 ATLELSRLVYRRSPELWQRFVRFSNKATVADFIEVEDGFVLTEFFGGQAYHTSVVCIGRD 240 ATL L R VY RS ELWQRFVRFS KATVADF++ ED F+LTEFF +AYH VVC+GRD Sbjct: 181 ATLGLCRCVYERSSELWQRFVRFSKKATVADFVDSEDAFILTEFFSNEAYHAPVVCLGRD 240 Query: 241 PDQANGRLCLSLNEDMGRLAAMSDLELQVHLTQKPSPIRRFRINAAPTLTAFYDAPEHML 300 P+Q NGRLCL L+ D+GR MSD +L+V L +KPSPIRRFRINAAPTLTA YDA + ML Sbjct: 241 PEQPNGRLCLRLDGDVGRFYTMSDEDLRVELARKPSPIRRFRINAAPTLTALYDARDQML 300 Query: 301 DGGSMGATGDRACLMKADTGLCARLVAAYMAAREPYALSPHLEERIYSGFPGPADEARIA 360 +G + RA +K D CA L++AY + R P+A S H+EE+IY FPGP DEAR+ Sbjct: 301 NGIDLDEVETRARRVKDDPTFCAHLISAYASIRGPHAPSRHVEEQIYDRFPGPDDEARME 360 Query: 361 AFHDARWEDRLAIVQGMEDERLRWFGLRLIYFEARSVLPEPTRLEVERYLTDQMTGDGSG 420 FH W + L+IVQ EDERLR FGLRL+YFE RSVLPE RL VER LTD++ + SG Sbjct: 361 RFHKVGWREVLSIVQSFEDERLRCFGLRLVYFEHRSVLPEEIRLRVERELTDRLVEEESG 420 Query: 421 CLTIDQAMAETERVLG-EFASPDDLLIQYRTYLQDRLARLEAYR 463 LT+ +A+ ET+ +LG ++ + +L YR YL DR+ R+ +R Sbjct: 421 GLTLRRALQETDALLGSDYTDTNGILADYRAYLVDRITRVSNFR 464 >ref|YP_781392.1| exodeoxyribonuclease I [Rhodopseudomonas palustris BisA53] gb|ABJ06412.1| Exodeoxyribonuclease I subunit C [Rhodopseudomonas palustris BisA53] Length = 490 Score = 581 bits (1498), Expect = e-164, Method: Compositional matrix adjust. Identities = 288/469 (61%), Positives = 352/469 (75%), Gaps = 1/469 (0%) Query: 1 MSFVFFDTETTGLKRGFDQILHFAAVRTDENLNEVARFETRSRLQPHVLPHPSALRTNGL 60 M FVFFDTETTGL+ GFDQI+HFAA+RTD +LNE RFE RSRL PHV+PHPSALRTN L Sbjct: 1 MGFVFFDTETTGLRHGFDQIVHFAAIRTDNDLNETDRFEVRSRLLPHVVPHPSALRTNRL 60 Query: 61 PIESLTDSSLPSHYTMVEDIRRTLISWSPAVFVGFNSIRFDEEMLRHALFQCLYPAYLTS 120 IE L D +LPSHY MV I+RTL++WSP++FVG+NSIRFDEEMLRHALFQ L+PAYLTS Sbjct: 61 SIERLIDGTLPSHYEMVRAIQRTLLAWSPSIFVGYNSIRFDEEMLRHALFQTLHPAYLTS 120 Query: 121 NHRNCRADALSLVMAADAVSPAQLVVPVSEEGRRTFRLQQLAAANGVAHARAHDAMSDVL 180 N+ NCRADAL L+MAA +SPA LVVP+ EGR FRL QLA+ N + H +AHDAM+DV Sbjct: 121 NNGNCRADALGLIMAAATLSPACLVVPLGPEGRPIFRLDQLASVNDLKHDQAHDAMADVA 180 Query: 181 ATLELSRLVYRRSPELWQRFVRFSNKATVADFIEVEDGFVLTEFFGGQAYHTSVVCIGRD 240 ATL+L RLV R+PELWQRF+RFS KATV DF+E EDGF LTEFF QAYH VVC+G D Sbjct: 181 ATLDLCRLVRERAPELWQRFIRFSKKATVGDFVESEDGFFLTEFFSNQAYHAPVVCLGPD 240 Query: 241 PDQANGRLCLSLNEDMGRLAAMSDLELQVHLTQKPSPIRRFRINAAPTLTAFYDAPEHML 300 PDQ NGRLCL L+ LA M D LQ +L+ KPSP+RR RINA+PTLTAF+DAP+ ML Sbjct: 241 PDQPNGRLCLRLDVPPEELALMPDEALQAYLSAKPSPVRRLRINASPTLTAFHDAPDLML 300 Query: 301 DGGSMGATGDRACLMKADTGLCARLVAAYMAAREPYALSPHLEERIYSGFPGPADEARIA 360 +G + DRA +K D +R+++ Y+A RE +A S H+E +IY G GP DE RIA Sbjct: 301 NGADLDELEDRARRLKEDAAFRSRIISLYVAVRESFAPSLHVEGQIYDGLLGPDDERRIA 360 Query: 361 AFHDARWEDRLAIVQGMEDERLRWFGLRLIYFEARSVLPEPTRLEVERYLTDQMTGDGSG 420 FH+A W + L+IV+ ++DERLR FG RLIYF RSVLP +L VER LTD++ + +G Sbjct: 361 DFHEASWLEALSIVRDLDDERLRIFGRRLIYFGGRSVLPSDLKLIVERDLTDRLVDNAAG 420 Query: 421 CLTIDQAMAETERVL-GEFASPDDLLIQYRTYLQDRLARLEAYRTRLIA 468 T+ QA+ ETER+L GE D +L YRTYL DR++R+ +R + A Sbjct: 421 NFTLQQALEETERLLNGEGIDADGILPGYRTYLIDRISRVTEFRAKEFA 469