BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0069.0014.p (416 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766712.1| hypothetical protein blr0072 [Bradyrhizobium ja... 853 0.0 ref|YP_002962736.1| hypothetical protein MexAM1_META1p1600 [meth... 423 e-116 ref|YP_673118.1| hypothetical protein Meso_0550 [Mesorhizobium s... 370 e-100 ref|YP_569427.1| hypothetical protein RPD_2294 [Rhodopseudomonas... 366 4e-99 ref|ZP_00050002.2| hypothetical protein Magn03003678 [Magnetospi... 223 4e-56 >ref|NP_766712.1| hypothetical protein blr0072 [Bradyrhizobium japonicum USDA 110] dbj|BAC45337.1| blr0072 [Bradyrhizobium japonicum USDA 110] Length = 416 Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/416 (100%), Positives = 416/416 (100%) Query: 1 MSNFPSLRRDDRPDDPFADPLDAVLAELAINIQLPPGLHAKAVERYEAVRRYIERPGSPL 60 MSNFPSLRRDDRPDDPFADPLDAVLAELAINIQLPPGLHAKAVERYEAVRRYIERPGSPL Sbjct: 1 MSNFPSLRRDDRPDDPFADPLDAVLAELAINIQLPPGLHAKAVERYEAVRRYIERPGSPL 60 Query: 61 EGRVACFYPQGSMAIDATTSTRGTDDEYDLDIVAEIEGPDLGPEALLDDLEAALESYPVS 120 EGRVACFYPQGSMAIDATTSTRGTDDEYDLDIVAEIEGPDLGPEALLDDLEAALESYPVS Sbjct: 61 EGRVACFYPQGSMAIDATTSTRGTDDEYDLDIVAEIEGPDLGPEALLDDLEAALESYPVS 120 Query: 121 KVVRQTRCITLYYADGMHLDITPSRRRAPKEKEGEIPHAKKGTRSDPARYVPMNSYAFGK 180 KVVRQTRCITLYYADGMHLDITPSRRRAPKEKEGEIPHAKKGTRSDPARYVPMNSYAFGK Sbjct: 121 KVVRQTRCITLYYADGMHLDITPSRRRAPKEKEGEIPHAKKGTRSDPARYVPMNSYAFGK 180 Query: 181 WYCARTPTEERFALALNRQLYEQAGIAFAAADVEDVPPQTPLIIKSVTTVALQLIKRHRN 240 WYCARTPTEERFALALNRQLYEQAGIAFAAADVEDVPPQTPLIIKSVTTVALQLIKRHRN Sbjct: 181 WYCARTPTEERFALALNRQLYEQAGIAFAAADVEDVPPQTPLIIKSVTTVALQLIKRHRN 240 Query: 241 IAYATETGRIPPSVMLSCHAGHAARPGMRLAEMLIRQARWTARAIDDAAKRGQLLVVPNP 300 IAYATETGRIPPSVMLSCHAGHAARPGMRLAEMLIRQARWTARAIDDAAKRGQLLVVPNP Sbjct: 241 IAYATETGRIPPSVMLSCHAGHAARPGMRLAEMLIRQARWTARAIDDAAKRGQLLVVPNP 300 Query: 301 EFPVERFTDRWPESQLQQTTYSRHLHTLANGLEAARTGDVQLEDLQEWLRGQFGDRVVTR 360 EFPVERFTDRWPESQLQQTTYSRHLHTLANGLEAARTGDVQLEDLQEWLRGQFGDRVVTR Sbjct: 301 EFPVERFTDRWPESQLQQTTYSRHLHTLANGLEAARTGDVQLEDLQEWLRGQFGDRVVTR 360 Query: 361 SVKAFNQRLGRQVQSRQHGYTRSGGLFVPAAPAIIGAATSLAPVAARAHTNMGERR 416 SVKAFNQRLGRQVQSRQHGYTRSGGLFVPAAPAIIGAATSLAPVAARAHTNMGERR Sbjct: 361 SVKAFNQRLGRQVQSRQHGYTRSGGLFVPAAPAIIGAATSLAPVAARAHTNMGERR 416 >ref|YP_002962736.1| hypothetical protein MexAM1_META1p1600 [methylobacterium extorquens AM1] gb|ACS39459.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 416 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 234/406 (57%), Positives = 288/406 (70%), Gaps = 5/406 (1%) Query: 15 DPFADPLDAVLAELAINIQLPPGLHAKAVERYEAVRRYIERPGSPLEGRVACFYPQGSMA 74 DP DPLDA+L ++A+ +QLPPGLH KA R EAV +++ER GSPL+ RV FYPQGSM Sbjct: 11 DPLQDPLDALLVDIAVRVQLPPGLHEKACGRGEAVCKHLERDGSPLKDRVRRFYPQGSMR 70 Query: 75 IDATTSTRGTDDEYDLDIVAEIE-GPDLGPEALLDDLEAALESYPVSK-VVRQTRCITLY 132 IDAT STRGTD+EYDLD VAE++ + P +LD + AL YP SK V RQTRC+T++ Sbjct: 71 IDATISTRGTDEEYDLDYVAELDVHHEASPGDVLDLVYLALVDYPTSKPVERQTRCVTVF 130 Query: 133 YADGMHLDITPSRRR-APKEKEGEIPHAKKGTRSDPARYVPMNSYAFGKWYCARTPTEER 191 +ADGMH+D+TPS E+E I HA + R+VPMN++ FG+WY ARTP E R Sbjct: 131 FADGMHVDVTPSSLLPYASERESHIFHANPDKPAHEERHVPMNAFGFGEWYNARTPIERR 190 Query: 192 FALALNRQLYEQAGIAF-AAADVEDVPPQTPLIIKSVTTVALQLIKRHRNIAYATETGRI 250 FA A+NR++YE AGI A A ++VP Q PLI+KSVTTVALQL+KRHRN+ YA GRI Sbjct: 191 FADAVNRRIYEAAGIEIRADAQFDEVPDQVPLIVKSVTTVALQLLKRHRNVIYAGYDGRI 250 Query: 251 PPSVMLSCHAGHAARPGMRLAEMLIRQARWTARAIDDAAKRGQLLVVPNPEFPVERFTDR 310 PPSVMLSC AGH A PG L++MLIR AR AR I A+ R + L V NP + + FTDR Sbjct: 251 PPSVMLSCIAGHVASPGSTLSDMLIRLARAVARMIQAASARREKLSVVNPVYGRDCFTDR 310 Query: 311 WPESQLQQTTYSRHLHTLANGLEAARTGDVQLEDLQEWLRGQFGDRVVTRSVKAFNQRLG 370 WPE QQ Y+ HL LA+GLEA R G LED Q+WLR QFGDRVV+RS++ FN+RLG Sbjct: 311 WPEGLAQQDAYATHLTRLADGLEAIRQG-ASLEDAQDWLRTQFGDRVVSRSLQTFNRRLG 369 Query: 371 RQVQSRQHGYTRSGGLFVPAAPAIIGAATSLAPVAARAHTNMGERR 416 V YT+ GGL+VP+AP IIGA + AP +AR+HT MGERR Sbjct: 370 GGVGQSTRAYTQRGGLYVPSAPRIIGAGAAAAPASARSHTFMGERR 415 >ref|YP_673118.1| hypothetical protein Meso_0550 [Mesorhizobium sp. BNC1] gb|ABG61953.1| conserved hypothetical protein [Chelativorans sp. BNC1] Length = 415 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 202/405 (49%), Positives = 263/405 (64%), Gaps = 5/405 (1%) Query: 15 DPFADPLDAVLAELAINIQLPPGLHAKAVERYEAVRRYIERPGSPLEGRVACFYPQGSMA 74 +PF DPLD +LAE+A+++QLPP LH KA RYEAVRR++E + + ++ FYPQGSMA Sbjct: 11 NPFDDPLDRILAEIALSVQLPPSLHDKAKSRYEAVRRHLEATTAFFD-QIEHFYPQGSMA 69 Query: 75 IDATTSTRGTDDEYDLDIVAEIEGPDLG--PEALLDDLEAALESYPVSKVVRQTRCITLY 132 IDAT STRGTDDEYDLDIV+++ G G P +L +LEAAL YPV +V+RQTRC+TL+ Sbjct: 70 IDATISTRGTDDEYDLDIVSQLGGRFRGMTPLEILTELEAALADYPVQRVLRQTRCVTLF 129 Query: 133 YADGMHLDITPSRRRAPK-EKEGEIPHAKKGTRSDPARYVPMNSYAFGKWYCARTPTEER 191 YAD MHLD+TPS R K ++E I HAK RS R+V MN+Y F +WY RTP E R Sbjct: 130 YADKMHLDVTPSLRVYSKLDRESLITHAKGPRRSVDDRFVDMNAYGFAQWYANRTPLELR 189 Query: 192 FALALNRQLYEQAGIAFAAADVEDVPP-QTPLIIKSVTTVALQLIKRHRNIAYATETGRI 250 A +R+ + AG+A A D P Q I+K+ T+ALQL+KR RNI YA+ GRI Sbjct: 190 MAKEFHRRWLDHAGLAARADADVDDVPDQCDFIVKNTATLALQLLKRFRNIRYASYAGRI 249 Query: 251 PPSVMLSCHAGHAARPGMRLAEMLIRQARWTARAIDDAAKRGQLLVVPNPEFPVERFTDR 310 PPSVMLS +AG AA+P M L+ ML+R A W R I+ A+ G+LL V NP + FTDR Sbjct: 250 PPSVMLSYYAGLAAQPNMSLSAMLVRLASWIIRDIEQASLYGRLLHVANPICEADVFTDR 309 Query: 311 WPESQLQQTTYSRHLHTLANGLEAARTGDVQLEDLQEWLRGQFGDRVVTRSVKAFNQRLG 370 WPES QQ ++ HL L LEA R G++ + + + LRG FGDRVVTR+ +G Sbjct: 310 WPESIAQQDEFAGHLRVLTRSLEAMRKGEMFPDTMMDVLRGNFGDRVVTRAADQIATEIG 369 Query: 371 RQVQSRQHGYTRSGGLFVPAAPAIIGAATSLAPVAARAHTNMGER 415 +Q + YTR GGL +P+A + + + AR HT G + Sbjct: 370 GGIQQSRQLYTRRGGLLLPSAAGVAAPIINPSVSVARPHTFFGRK 414 >ref|YP_569427.1| hypothetical protein RPD_2294 [Rhodopseudomonas palustris BisB5] gb|ABE39526.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 415 Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 200/405 (49%), Positives = 263/405 (64%), Gaps = 5/405 (1%) Query: 15 DPFADPLDAVLAELAINIQLPPGLHAKAVERYEAVRRYIERPGSPLEGRVACFYPQGSMA 74 +PF DPLD +LAE+A+++QLPP LH KA RYEAVRR++E + + ++ FYPQGSMA Sbjct: 11 NPFDDPLDRILAEIALSVQLPPSLHDKAKSRYEAVRRHLEATTAFFD-QIEHFYPQGSMA 69 Query: 75 IDATTSTRGTDDEYDLDIVAEIEGP--DLGPEALLDDLEAALESYPVSKVVRQTRCITLY 132 IDAT STRGTDDEYDLDI++++ G + P +L +LEAAL YPV +V+RQTRC+TL+ Sbjct: 70 IDATISTRGTDDEYDLDIISQLGGRFRGMAPLEILTELEAALADYPVQRVLRQTRCVTLF 129 Query: 133 YADGMHLDITPSRR-RAPKEKEGEIPHAKKGTRSDPARYVPMNSYAFGKWYCARTPTEER 191 YAD MHLD+TPS R ++E I HAK RS R V MN+Y F +WY +RTP E R Sbjct: 130 YADKMHLDVTPSLRVYTTLDRESLITHAKGPRRSADDRLVDMNAYGFVQWYTSRTPLELR 189 Query: 192 FALALNRQLYEQAGIAFAAADVEDVPP-QTPLIIKSVTTVALQLIKRHRNIAYATETGRI 250 A A +R+ + AG+A A D P Q I+K+ T+ALQL+KR RNI YA+ TGRI Sbjct: 190 MAKAFHRRWLDHAGLAARADADVDDVPDQCDFIVKNTATLALQLLKRFRNIRYASYTGRI 249 Query: 251 PPSVMLSCHAGHAARPGMRLAEMLIRQARWTARAIDDAAKRGQLLVVPNPEFPVERFTDR 310 PPSVMLS +AG AA+P M L+ ML+R A W R I+ A+ G+LL V NP + FTDR Sbjct: 250 PPSVMLSYYAGLAAQPNMSLSAMLVRLASWIIRDIEQASLYGRLLHVANPVCEADVFTDR 309 Query: 311 WPESQLQQTTYSRHLHTLANGLEAARTGDVQLEDLQEWLRGQFGDRVVTRSVKAFNQRLG 370 WPES QQ ++ HL + LEA R G++ + + LR FGDRVVTR+ +G Sbjct: 310 WPESIGQQDEFAGHLGEVVRSLEAMRKGEMAPNTMMDALRENFGDRVVTRAADQIATEIG 369 Query: 371 RQVQSRQHGYTRSGGLFVPAAPAIIGAATSLAPVAARAHTNMGER 415 +Q + YTR GG+ +P+A A+ + AAR HT G + Sbjct: 370 GGIQQSRQLYTRRGGVLLPSAAAVAAPIVNPTVSAARPHTFFGRK 414 >ref|ZP_00050002.2| hypothetical protein Magn03003678 [Magnetospirillum magnetotacticum MS-1] Length = 248 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 118/221 (53%), Positives = 153/221 (69%), Gaps = 1/221 (0%) Query: 173 MNSYAFGKWYCARTPTEERFALALNRQLYEQAGIAFAA-ADVEDVPPQTPLIIKSVTTVA 231 MN+Y F +WY ARTP E RFA A N++L+E G+ A A+V+++ Q P+I+K+V TVA Sbjct: 1 MNAYGFAEWYRARTPLERRFAAAFNKRLHEAYGMEVRADAEVDEILDQVPIIVKAVATVA 60 Query: 232 LQLIKRHRNIAYATETGRIPPSVMLSCHAGHAARPGMRLAEMLIRQARWTARAIDDAAKR 291 LQL+KRHRN+AYA TGRIPPSVMLSC AG A++PG+ L +M+IR AR A A+ A+ R Sbjct: 61 LQLLKRHRNVAYAGATGRIPPSVMLSCFAGQASQPGLTLTDMVIRLARTVASALRAASAR 120 Query: 292 GQLLVVPNPEFPVERFTDRWPESQLQQTTYSRHLHTLANGLEAARTGDVQLEDLQEWLRG 351 + + V NP P + FTDRWPE+ QQ Y+ L LA+GL + LED+QEWLR Sbjct: 121 REPIRVVNPVHPEDCFTDRWPENVAQQDEYAAKLTDLADGLAWIKQHGSSLEDIQEWLRE 180 Query: 352 QFGDRVVTRSVKAFNQRLGRQVQSRQHGYTRSGGLFVPAAP 392 +FG VV+ SV+ FN R GR VQS H YT GGL+VP+ P Sbjct: 181 RFGSHVVSTSVRRFNDRTGRAVQSGLHAYTPRGGLYVPSRP 221