BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0069.0012.p (345 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766714.1| hypothetical protein blr0074 [Bradyrhizobium ja... 700 0.0 ref|YP_001600418.1| hypothetical protein GDI_0126 [Gluconacetoba... 453 e-125 ref|NP_788158.1| hypothetical protein rc171 [Ruegeria sp. PR1b] ... 358 6e-97 ref|YP_004567803.1| hypothetical protein BCO26_0358 [Bacillus co... 328 9e-88 ref|YP_767546.1| hypothetical protein RL1944 [Rhizobium legumino... 318 7e-85 >ref|NP_766714.1| hypothetical protein blr0074 [Bradyrhizobium japonicum USDA 110] dbj|BAC45339.1| blr0074 [Bradyrhizobium japonicum USDA 110] Length = 378 Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/345 (100%), Positives = 345/345 (100%) Query: 1 LVGDLVAGRQDGIFGFIAHIVADVEGGPRGDPIRSTQLARSLENLMLMCARHHKLIDLDA 60 LVGDLVAGRQDGIFGFIAHIVADVEGGPRGDPIRSTQLARSLENLMLMCARHHKLIDLDA Sbjct: 34 LVGDLVAGRQDGIFGFIAHIVADVEGGPRGDPIRSTQLARSLENLMLMCARHHKLIDLDA 93 Query: 61 VADHPESVLLTMKAEHEGRIAIVAGIDEDRASHVIRFGASICDNEALVSTQAIFSAMPPD 120 VADHPESVLLTMKAEHEGRIAIVAGIDEDRASHVIRFGASICDNEALVSTQAIFSAMPPD Sbjct: 94 VADHPESVLLTMKAEHEGRIAIVAGIDEDRASHVIRFGASICDNEALVSTQAIFSAMPPD 153 Query: 121 RHPASGQRLDLEMVGCAFRDNEPAYWTVQRENLRRQFEAKVRGRVERQEIRHLSVFALAP 180 RHPASGQRLDLEMVGCAFRDNEPAYWTVQRENLRRQFEAKVRGRVERQEIRHLSVFALAP Sbjct: 154 RHPASGQRLDLEMVGCAFRDNEPAYWTVQRENLRRQFEAKVRGRVERQEIRHLSVFALAP 213 Query: 181 QPLLIELGRLLCDIVPAVVHQRHREPASWRWASDGPPITFQVTEPDIGLSGSVALKLGVS 240 QPLLIELGRLLCDIVPAVVHQRHREPASWRWASDGPPITFQVTEPDIGLSGSVALKLGVS Sbjct: 214 QPLLIELGRLLCDIVPAVVHQRHREPASWRWASDGPPITFQVTEPDIGLSGSVALKLGVS 273 Query: 241 ATVTDARLQAVLGDEAAIWSLCADQPHNDVLRRADDQAAFRRELRRLYDRIKARHGEGTL 300 ATVTDARLQAVLGDEAAIWSLCADQPHNDVLRRADDQAAFRRELRRLYDRIKARHGEGTL Sbjct: 274 ATVTDARLQAVLGDEAAIWSLCADQPHNDVLRRADDQAAFRRELRRLYDRIKARHGEGTL 333 Query: 301 LHVFPALPASLAVEVGRVWMPKSDLSLRLYDNNRSHGFIRTFDIP 345 LHVFPALPASLAVEVGRVWMPKSDLSLRLYDNNRSHGFIRTFDIP Sbjct: 334 LHVFPALPASLAVEVGRVWMPKSDLSLRLYDNNRSHGFIRTFDIP 378 >ref|YP_001600418.1| hypothetical protein GDI_0126 [Gluconacetobacter diazotrophicus PAl 5] emb|CAP54069.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length = 377 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 219/345 (63%), Positives = 272/345 (78%), Gaps = 1/345 (0%) Query: 1 LVGDLVAGRQDGIFGFIAHIVADVEGGPRGDPIRSTQLARSLENLMLMCARHHKLIDLDA 60 LVGDL+AGR DG FGFIAHIVAD GPRGDP+RS LA+ L NLML+CA+HHK +D+D Sbjct: 31 LVGDLIAGRVDGKFGFIAHIVADSADGPRGDPVRSPALAKDLSNLMLLCAKHHKGVDVDY 90 Query: 61 VADHPESVLLTMKAEHEGRIAIVAGIDEDRASHVIRFGASICDNEALVSTQAIFSAMPPD 120 +ADHPE VLL MKAEHE RIAIV G+ ++RA+HV+RF A I +ALVST++IF AMPPD Sbjct: 91 LADHPEPVLLEMKAEHEDRIAIVTGMAQERAAHVLRFAADIGQRDALVSTRSIFMAMPPD 150 Query: 121 RHPASGQRLDLEMVGCAFRDNEPAYWTVQRENLRRQFEAKVRGRVERQEIRHLSVFALAP 180 RHPA G+ +D+E+ GC + D+E YW+VQ++NLRR F KV+ R+E++EI+ LSVFALAP Sbjct: 151 RHPAEGRTIDIELAGCDYADHEANYWSVQQDNLRRVFARKVKERIEQKEIKQLSVFALAP 210 Query: 181 QPLLIELGRLLCDIVPAVVHQRHREPASWRWASDGPPITFQVTEPDIGLSGSVALKLGVS 240 QPLLIELG LL DIVP VHQR+REP +WRW +D P ITFQV + + +VALKL +S Sbjct: 211 QPLLIELGHLLGDIVPVTVHQRYREPPTWRWQADQPAITFQVGDYSGAPNVAVALKLALS 270 Query: 241 ATVTDARLQAVLGDEAAIWSLCADQPHNDVLRRADDQAAFRRELRRLYDRIKARHGEGTL 300 ATVTD R+ AVLG++ AIWSL A+ PHND++RR DD F+ +LRRL DRIKA HGE + Sbjct: 271 ATVTDERISAVLGEDVAIWSLTAENPHNDIMRRPDDLIEFKHQLRRLLDRIKAVHGENAV 330 Query: 301 LHVFPALPASLAVEVGRVWMPKSDLSLRLYDNNRS-HGFIRTFDI 344 ++VFPALP S AVEVGRVWMPK+DL +++YD NR+ GFI T I Sbjct: 331 INVFPALPNSAAVEVGRVWMPKADLPMQIYDQNRAVGGFIPTLCI 375 >ref|NP_788158.1| hypothetical protein rc171 [Ruegeria sp. PR1b] gb|AAN05244.1| RC171 [Ruegeria sp. PR1b] Length = 325 Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 174/318 (54%), Positives = 226/318 (71%), Gaps = 1/318 (0%) Query: 21 VADVEGGPRGDPIRSTQLARSLENLMLMCARHHKLIDLDAVADHPESVLLTMKAEHEGRI 80 +AD + GPRGD +RS LAR + NLMLMC HHK ID+D V D+PE L+ MK EHE RI Sbjct: 1 MADSDNGPRGDKVRSPLLARDISNLMLMCPIHHKEIDVDHVDDYPEETLVAMKREHEERI 60 Query: 81 AIVAGIDEDRASHVIRFGASICDNEALVSTQAIFSAMPPDRHPASGQRLDLEMVGCAFRD 140 V +D DRA+HV+RF A+I ++LVST+AIF+AMPPDRHPA + +D+E+ +D Sbjct: 61 ETVTDMDADRAAHVLRFAANIGQMDSLVSTKAIFAAMPPDRHPAERRTIDIEL-NSEIKD 119 Query: 141 NEPAYWTVQRENLRRQFEAKVRGRVERQEIRHLSVFALAPQPLLIELGRLLCDIVPAVVH 200 +EP +W +Q +L RQF+ KV+ R+E++EI LSVFALAPQPLLIELG LL DI+P VH Sbjct: 120 DEPEFWGMQSAHLHRQFQRKVKERIEQKEILQLSVFALAPQPLLIELGTLLGDIMPVSVH 179 Query: 201 QRHREPASWRWASDGPPITFQVTEPDIGLSGSVALKLGVSATVTDARLQAVLGDEAAIWS 260 Q++REP++W+W P I F+V E VALKL +SATV D R+ +VLGD AIWS Sbjct: 180 QKYREPSTWKWQLHQPSINFKVGEYSGPKDVPVALKLALSATVDDQRICSVLGDNTAIWS 239 Query: 261 LCADQPHNDVLRRADDQAAFRRELRRLYDRIKARHGEGTLLHVFPALPASLAVEVGRVWM 320 + A+ PHND++RR DD A ++ LRRL+D+IKA HGE +++FP LP S AVE GR M Sbjct: 240 ITAEDPHNDIMRRQDDLAIYKAHLRRLFDQIKAHHGEDATINMFPVLPVSAAVETGRTRM 299 Query: 321 PKSDLSLRLYDNNRSHGF 338 PK+DL L +YD GF Sbjct: 300 PKADLPLVIYDQKPGKGF 317 >ref|YP_004567803.1| hypothetical protein BCO26_0358 [Bacillus coagulans 2-6] gb|AEH52417.1| hypothetical protein BCO26_0358 [Bacillus coagulans 2-6] Length = 381 Score = 328 bits (840), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 158/331 (47%), Positives = 221/331 (66%), Gaps = 2/331 (0%) Query: 15 GFIAHIVADVEGGPRGDPIRSTQLARSLENLMLMCARHHKLIDLDAVADHPESVLLTMKA 74 +IAHI+AD GPRGD I S QLA + NLMLMC +HH+LID + V HP L MK Sbjct: 44 AYIAHIIADRPNGPRGDKILSPQLAADISNLMLMCDKHHRLIDKEDVKGHPVERLRRMKK 103 Query: 75 EHEGRIAIVAGIDEDRASHVIRFGASICDNEALVSTQAIFSAMPPDRHPASGQRLDLEMV 134 HE RI +V I+ D SHV+ +GA+I ++ A +S + +AM P ++P Q ++L + Sbjct: 104 NHETRIKMVTSINNDMKSHVLFYGANIGEHNANLSWKRAVTAMHPFKYPVEEQPIELGIG 163 Query: 135 GCAFRDNEPAYWTVQRENLRRQFEAKVRGRVERQEIRHLSVFALAPQPLLIELGRLLCDI 194 F DN +W ++RENL QF+ KV+ +VER + HLS+FALAPQPLLI+LG LL DI Sbjct: 164 NSPFHDNNKTFWNIERENLIMQFKDKVKDKVERGSVAHLSIFALAPQPLLIKLGTLLSDI 223 Query: 195 VPAVVHQRHREPASWRWASDGPPITFQVTEPDIGLSGSVALKLGVSATVTDARLQAVLGD 254 PA V+Q HREP +W+W + F + EP + G VAL L +SA +T+ R+ VLG+ Sbjct: 224 YPADVYQLHREPPTWKWQEEPKEFEFIIKEPR-QVFGLVALNLSLSADITENRITKVLGN 282 Query: 255 EAAIWSLCADQPHNDVLRRADDQAAFRRELRRLYDRIKARHGEGTLLHVFPALPASLAVE 314 + +IW++ + P+ND L+ + FR +R+++++IK H E ++HVFPA+P S AVE Sbjct: 283 DVSIWTITVNNPNNDFLKSKVQLSKFRALMRKVFNKIKYTHDETDVIHVFPAMPVSSAVE 342 Query: 315 VGRVWMPKSDLSLRLYDNNRSH-GFIRTFDI 344 +GRVWMPK+DL+L LYD NR++ GFI TFDI Sbjct: 343 LGRVWMPKADLALSLYDENRNNGGFIHTFDI 373 >ref|YP_767546.1| hypothetical protein RL1944 [Rhizobium leguminosarum bv. viciae 3841] emb|CAK07437.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 397 Score = 318 bits (815), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 168/346 (48%), Positives = 224/346 (64%), Gaps = 3/346 (0%) Query: 1 LVGDLVAGRQDGIFGFIAHIVADVEGGPRGDPIRSTQLARSLENLMLMCARHHKLIDLDA 60 LVGDL+ GR D +IAHIV+D GGPRGD I S +L+ NLML+C HH+LID A Sbjct: 49 LVGDLLTGRDDLNTAYIAHIVSDAPGGPRGDDILSPKLSTDPSNLMLLCDPHHRLIDGKA 108 Query: 61 V-ADHPESVLLTMKAEHEGRIAIVAGIDEDRASHVIRFGASICDNEALVSTQAIFSAMPP 119 D+P+ +LL MKAEHE RI V I DR HVIRF A I NE+ V+ A+ A+ P Sbjct: 109 TWRDYPDQLLLEMKAEHEDRIEAVTSIVRDRGCHVIRFAAGIGKNESPVNVDAVKEALLP 168 Query: 120 DRHPASGQRLDLEMVGCAFRDNEPAYWTVQRENLRRQFEAKVRGRVERQEIRHLSVFALA 179 + +P +DL++ D++ YW + + LR +++ +V+GR+ER EI L+VFALA Sbjct: 169 EFYPVRNGMIDLDVPDLGIPDSDAGYWPLHQRLLREKYQERVKGRLERNEINRLAVFALA 228 Query: 180 PQPLLIELGRLLCDIVPAVVHQRHREPASWRWASDGPPITFQVTEPDIGLSGSVALKLGV 239 P PLLIELGRLL DI A V QR REP +W W S+ + EP VALKLGV Sbjct: 229 PMPLLIELGRLLSDISEAHVRQRVREPTTWEWQSEPGEMELVREEP-ASKGPVVALKLGV 287 Query: 240 SATVTDARLQAVLGDEAAIWSLCADQPHNDVLRRADDQAAFRRELRRLYDRIKARHGEGT 299 S + D R+ +VLGD+ +IWSL A+ HND+LR D +R+ELR +++ IK HG Sbjct: 288 SGPIDDDRITSVLGDDVSIWSLSANGAHNDILRTPSDLTLWRKELRAIFEAIKDNHGRTD 347 Query: 300 LLHVFPALPASLAVEVGRVWMPKSDLSLRLYDNNRS-HGFIRTFDI 344 ++H+FPA+P S AVE+GRVWMPK+ L +R+YD+N + GF +T DI Sbjct: 348 IVHIFPAVPVSAAVELGRVWMPKAHLPMRIYDHNWALGGFRQTLDI 393