BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0069.0006.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001205496.1| putative signal peptide [Bradyrhizobium sp. ... 504 e-141 ref|NP_773456.1| hypothetical protein blr6816 [Bradyrhizobium ja... 272 5e-71 ref|YP_995590.1| extracellular solute-binding protein [Vermineph... 270 2e-70 ref|ZP_08872532.1| extracellular solute-binding protein [Vermine... 258 8e-67 ref|YP_001523732.1| ABC transporter substrate-binding protein [A... 254 1e-65 >ref|YP_001205496.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL77270.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 277 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 247/277 (89%), Positives = 260/277 (93%), Gaps = 1/277 (0%) Query: 17 LRYALGIGSGAALAAAMAT-PASAQTPADNTLDRIRASKVLRIAVLPGELPYFNKDLASG 75 +RYAL IGSGAALA+AM T PASAQ ADNTLDR+RASKVLRIAVLPGELPYFNKDLASG Sbjct: 1 MRYALAIGSGAALASAMTTTPASAQAAADNTLDRVRASKVLRIAVLPGELPYFNKDLASG 60 Query: 76 TWSGFSIEMANDLAKLLDVKLEYVESTYGNSILDLQANKIDLGFALNPTPQRALVVDFTN 135 TWSGFSIEMAND+AKLLDVKLEYVESTYGNS+LDLQA KIDLGFALNPTPQRALV+DF Sbjct: 61 TWSGFSIEMANDIAKLLDVKLEYVESTYGNSVLDLQAGKIDLGFALNPTPQRALVIDFCG 120 Query: 136 LVFPHPFGAMLKKGLEAKTWADINKPEVKIAVDVGSANEAVARRFAPNATIKSLKSRDEV 195 VFPHPFGAMLKKG+EAKTWADINKPEVKIAVDVGSANEAVARRFAPNATIKSLKSRDEV Sbjct: 121 TVFPHPFGAMLKKGMEAKTWADINKPEVKIAVDVGSANEAVARRFAPNATIKSLKSRDEV 180 Query: 196 MLEMSSGRVDCVVNALVLGLTAIAKNPNLGTYKILASPSVTIASGTAVRREADKRWRDFL 255 MLEM+SGRVD VVNAL+LGLTAIAKNPNLG+YKIL SPSV I S VRREADKRWRDFL Sbjct: 181 MLEMASGRVDVVVNALILGLTAIAKNPNLGSYKILQSPSVAIPSSMGVRREADKRWRDFL 240 Query: 256 SVWIDYNRGIGQMREWFVKGLGLAGVKPEDVPVELSI 292 +VWIDYNRGIGQMREWFVKGLGLAGVK EDVPVE++I Sbjct: 241 AVWIDYNRGIGQMREWFVKGLGLAGVKAEDVPVEVNI 277 >ref|NP_773456.1| hypothetical protein blr6816 [Bradyrhizobium japonicum USDA 110] dbj|BAC52081.1| blr6816 [Bradyrhizobium japonicum USDA 110] Length = 278 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 127/255 (49%), Positives = 178/255 (69%), Gaps = 2/255 (0%) Query: 39 AQTPADNTLDRIRASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDLAKLLDVKLEY 98 A T +TL+RI+ S VLRIAV+ G+ PYF+KDL + WSG I+MAND+A L K+E Sbjct: 25 ADTAPGSTLERIKKSGVLRIAVIAGQDPYFHKDLTTNQWSGACIDMANDIAGKLGAKVET 84 Query: 99 VESTYGNSILDLQANKIDLGFALNPTPQRALVVDFTNLVFPHPFGAMLKKGL-EAKTWAD 157 +EST+GN ILDLQA KIDL FA+NPTP+R+LV+DF+ + H F + KKG + +TWA+ Sbjct: 85 LESTWGNQILDLQAEKIDLAFAVNPTPERSLVIDFSTPILVHSFTVITKKGFAKPQTWAE 144 Query: 158 INKPEVKIAVDVGSANEAVARRFAPNATIKSLKSRDEVMLEMSSGRVDCVVNALVLGLTA 217 +NKPEVKIAVD+GS +E +ARR+ P ATI K R+E +L +++GR DC ++ VL + Sbjct: 145 LNKPEVKIAVDIGSTHETIARRYCPKATILGFKERNEAILAVATGRADCNISLAVLSVAT 204 Query: 218 IAKNPNLGTYKILASPSVTIASGTAVRREADKRWRDFLSVWIDYNRGIGQMREWFVKGLG 277 + KNP LG + P +T+ + +R E+D+R++DFLS W DYNR +GQ REW +KG Sbjct: 205 LKKNPTLGELAV-PRPLLTLPTNMGIRAESDRRYKDFLSAWADYNRSLGQTREWMLKGFE 263 Query: 278 LAGVKPEDVPVELSI 292 G+ +D+P E+ Sbjct: 264 AVGLGADDIPGEVQF 278 >ref|YP_995590.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM56572.1| cyclohexadienyl dehydratase [Verminephrobacter eiseniae EF01-2] Length = 294 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 127/250 (50%), Positives = 174/250 (69%), Gaps = 2/250 (0%) Query: 44 DNTLDRIRASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDLAKLLDVKLEYVESTY 103 D+TLDR++ VLR AV+ G+ PYF KDL +G W G IEMAND+A L V++E +EST+ Sbjct: 46 DSTLDRVQKRGVLRAAVILGQAPYFTKDLMTGQWGGACIEMANDIAAKLGVRVELLESTW 105 Query: 104 GNSILDLQANKIDLGFALNPTPQRALVVDFTNLVFPHPFGAMLKKGL-EAKTWADINKPE 162 G+ ILDLQ++K+DL FA+NPTP+RALV+DF + H F + +KG + +TW D+N+PE Sbjct: 106 GHQILDLQSDKVDLAFAVNPTPERALVIDFATPILVHSFTVVTRKGFRKPQTWEDLNRPE 165 Query: 163 VKIAVDVGSANEAVARRFAPNATIKSLKSRDEVMLEMSSGRVDCVVNALVLGLTAIAKNP 222 V+IAVD+GS +E++ARR+AP A I + K+RDE +L +++GR D V VL L + KNP Sbjct: 166 VRIAVDLGSTHESIARRYAPKAGISAFKNRDEAVLAVATGRADVNVVLAVLALPMLKKNP 225 Query: 223 NLGTYKILASPSVTIASGTAVRREADKRWRDFLSVWIDYNRGIGQMREWFVKGLGLAGVK 282 LG ++ P +++ + R E DKRWRDFLSVW DYNR IGQ REW KGL G+ Sbjct: 226 TLGEM-VIPRPILSLPTNIGTRIETDKRWRDFLSVWADYNRAIGQTREWMTKGLVELGIA 284 Query: 283 PEDVPVELSI 292 D+P E+ Sbjct: 285 AGDIPAEIHF 294 >ref|ZP_08872532.1| extracellular solute-binding protein [Verminephrobacter sp. At4] Length = 243 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 126/244 (51%), Positives = 168/244 (68%), Gaps = 2/244 (0%) Query: 50 IRASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDLAKLLDVKLEYVESTYGNSILD 109 +R S VLRIA + G+ PYFNKDL +G W+G ++MAND+ L K+E VE+T+GN ILD Sbjct: 1 MRKSGVLRIAAIVGQAPYFNKDLLTGKWTGACMDMANDIGAKLGAKVEVVETTWGNQILD 60 Query: 110 LQANKIDLGFALNPTPQRALVVDFTNLVFPHPFGAMLKKGL-EAKTWADINKPEVKIAVD 168 LQA+KIDL FA+NPTP+RALV+DF + + H F A+ +KG + TW D++KP V+IAVD Sbjct: 61 LQADKIDLAFAVNPTPERALVIDFASPILMHSFTAVTRKGFPKPATWEDLSKPTVRIAVD 120 Query: 169 VGSANEAVARRFAPNATIKSLKSRDEVMLEMSSGRVDCVVNALVLGLTAIAKNPNLGTYK 228 +GS +E +ARR+AP A I K+RDE +L +++GR DC V +L L + KNP LG Sbjct: 121 LGSTHELIARRYAPKANIVGFKNRDEAVLAVATGRADCNVVLAILALPMLKKNPALGEIA 180 Query: 229 ILASPSVTIASGTAVRREADKRWRDFLSVWIDYNRGIGQMREWFVKGLGLAGVKPEDVPV 288 I P +T+ S VR + D+R+RDFLSVW DYNR IGQ REW +KGL V D+P Sbjct: 181 I-PRPILTLPSNLGVRIDPDRRFRDFLSVWTDYNRSIGQTREWLLKGLAEINVTVADIPA 239 Query: 289 ELSI 292 E+ Sbjct: 240 EVQF 243 >ref|YP_001523732.1| ABC transporter substrate-binding protein [Azorhizobium caulinodans ORS 571] dbj|BAF86814.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 282 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 124/258 (48%), Positives = 171/258 (66%), Gaps = 1/258 (0%) Query: 35 TPASAQTPADNTLDRIRASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDLAKLLDV 94 TPA+AQ+ ++T DRIR +K LRI + G PY+NKDLA+G W GF I+++ LA L+ Sbjct: 26 TPAAAQSADESTFDRIRRTKKLRIGAVAGGAPYYNKDLATGQWKGFYIDISKALADELEC 85 Query: 95 KLEYVESTYGNSILDLQANKIDLGFALNPTPQRALVVDFTNLVFPHPFGAMLKKGLEAKT 154 +LE E+T+GNS+LDLQANKID+ F LNPTP+RALVVDF+ VF + F + +K KT Sbjct: 86 QLEITETTWGNSVLDLQANKIDIFFGLNPTPKRALVVDFSVPVFSNAFTMLTRKDFAPKT 145 Query: 155 WADINKPEVKIAVDVGSANEAVARRFAPNATIKSLKSRDEVMLEMSSGRVDCVVNALVLG 214 WA++N P VKIAVDVGS+++ V R P A I LK+ DE + + SGRVD L+L Sbjct: 146 WAELNDPNVKIAVDVGSSHDQVVSRLCPKAQIVRLKTADEATMALVSGRVDAQCIILMLA 205 Query: 215 LTAIAKNPNLGTYKILASPSVTIASGTAVRREADKRWRDFLSVWIDYNRGIGQMREWFVK 274 LT KNPN+G ++ +P + S RRE DK WRD+++ WI+YN+G+G +R V Sbjct: 206 LTVRKKNPNVGQL-LVPTPVFSTTSNAGFRRENDKTWRDYVNTWIEYNKGLGFIRSAIVT 264 Query: 275 GLGLAGVKPEDVPVELSI 292 + L GV D+P + + Sbjct: 265 NMELVGVTEADMPAGIQL 282