BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0068.0067.p (230 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08627045.1| lytic transglycosylase [Bradyrhizobiaceae bac... 249 3e-64 ref|YP_001685447.1| lytic transglycosylase catalytic subunit [Ca... 223 2e-56 ref|YP_001925772.1| lytic transglycosylase [Methylobacterium pop... 223 2e-56 ref|YP_001418889.1| lytic transglycosylase catalytic [Xanthobact... 221 5e-56 ref|YP_001417769.1| lytic transglycosylase catalytic [Xanthobact... 217 1e-54 >ref|ZP_08627045.1| lytic transglycosylase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP10325.1| lytic transglycosylase [Bradyrhizobiaceae bacterium SG-6C] Length = 158 Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 123/158 (77%), Positives = 131/158 (82%) Query: 73 MGLMQIMPEAWAELRLRYDLGNDPYDPHDNILAGTAYLRELFDRYGSPGFLAAYNAGPAR 132 MGLMQIMP+ W ELRLRYDLGNDP DP DNILAGTAYLREL DRYGSPG LAAYNAGPAR Sbjct: 1 MGLMQIMPKTWEELRLRYDLGNDPCDPRDNILAGTAYLRELRDRYGSPGSLAAYNAGPAR 60 Query: 133 YEEHLAGRSLPAETQAYLQRLAPVVGSDIAASSTIGSLRPSAAALFVVWSESSKTAARLE 192 YEEHLAGR LPAETQAYLQ+L PV+G DIA SS + SLRPSA +LF+V SESSK A RL+ Sbjct: 61 YEEHLAGRPLPAETQAYLQKLTPVIGGDIATSSALESLRPSAGSLFIVRSESSKAAGRLQ 120 Query: 193 PKRSPNRAPTTASVHDISAIVPQATGLFVVRCDAGGPR 230 R PN AP AS+ DISAIVPQA GLFV R D GGPR Sbjct: 121 LVRPPNPAPMAASIRDISAIVPQARGLFVARSDTGGPR 158 >ref|YP_001685447.1| lytic transglycosylase catalytic subunit [Caulobacter sp. K31] gb|ABZ72949.1| Lytic transglycosylase catalytic [Caulobacter sp. K31] Length = 310 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 118/204 (57%), Positives = 146/204 (71%), Gaps = 5/204 (2%) Query: 32 DSHADFVEQAALRFGVPLHWIRAVINVESAGDVRARSPKGAMGLMQIMPEAWAELRLRYD 91 D +ADF+ +A+ RFG+P WIRA++ VESA DVRA SPKGAMGLMQIMP WA+LR R+ Sbjct: 107 DPYADFIAEASQRFGIPTAWIRAIMRVESANDVRAISPKGAMGLMQIMPATWADLRARHR 166 Query: 92 LGNDPYDPHDNILAGTAYLRELFDRYGSPGFLAAYNAGPARYEEHLA-GRSLPAETQAYL 150 LG++PYDP DNILAG AYLREL DRYGSPGFLAAYNAGP RYEE++A GR+LPAET+AY+ Sbjct: 167 LGDNPYDPRDNILAGAAYLRELHDRYGSPGFLAAYNAGPGRYEEYVATGRALPAETRAYV 226 Query: 151 QRLAPVVGSDIAASS-TIGSLRPSA---AALFVVWSESSKTAARLEPKRSPNRAPTTASV 206 L P+VG T+ ++ P A A LF+ +E A ++P RS APT V Sbjct: 227 AVLTPLVGDGATTGPITVATVDPLAWVRAPLFIGRNERIAAADPVQPDRSSIDAPTAIPV 286 Query: 207 HDISAIVPQATGLFVVRCDAGGPR 230 D +AI PQ+ GLFV R + GP+ Sbjct: 287 RDPAAIAPQSDGLFVARSERRGPQ 310 >ref|YP_001925772.1| lytic transglycosylase [Methylobacterium populi BJ001] gb|ACB81237.1| Lytic transglycosylase catalytic [Methylobacterium populi BJ001] Length = 257 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 132/233 (56%), Positives = 159/233 (68%), Gaps = 12/233 (5%) Query: 1 VMPLFVALSVSNV-PAVA---DARFARYEASYRGVDSHADFVEQAALRFGVPLHWIRAVI 56 V+ L LSV++V PA+A DA AR S R D A ++ +AA RF +P+ WIRAV+ Sbjct: 24 VLLLLTGLSVASVVPAIALAQDAPIAR--PSVR--DPQAPYIAEAAARFRIPIAWIRAVM 79 Query: 57 NVESAGDVRARSPKGAMGLMQIMPEAWAELRLRYDLGNDPYDPHDNILAGTAYLRELFDR 116 ESAGD A SPKGAMGLMQIMPE WA LR R+ LG DPYDPHDNI+AG AY+REL DR Sbjct: 80 RAESAGDPSATSPKGAMGLMQIMPETWAGLRARHRLGADPYDPHDNIIAGAAYIRELSDR 139 Query: 117 YGSPGFLAAYNAGPARYEEHLAGRSLPAETQAYLQRLAPVVGS-DIAASSTIGSLRPSA- 174 YGSPG++AAYNAGP RYE+ L GR LPAET+AYL +AP V S D A+ + + P A Sbjct: 140 YGSPGWIAAYNAGPGRYEDSLDGRPLPAETRAYLAIIAPSVSSGDPASPVIVAAADPLAW 199 Query: 175 --AALFVVWSESSKTAARLEPKRSPNRAPTTASVHDISAIVPQATGLFVVRCD 225 A LFV SE S A L +R+ + A T +V D+SAIVPQ+ GLFV R D Sbjct: 200 TRAPLFVAQSERSAAADPLPVERASSDASATPAVRDVSAIVPQSGGLFVARAD 252 >ref|YP_001418889.1| lytic transglycosylase catalytic [Xanthobacter autotrophicus Py2] gb|ABS69232.1| Lytic transglycosylase catalytic [Xanthobacter autotrophicus Py2] Length = 265 Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 115/207 (55%), Positives = 141/207 (68%), Gaps = 8/207 (3%) Query: 32 DSHADFVEQAALRFGVPLHWIRAVINVESAGDVRARSPKGAMGLMQIMPEAWAELRLRYD 91 D +ADF+ +AA RF +P WIR+V+ ES GD R+ SPKGAMGLMQIMP+ WAELR+ Y Sbjct: 59 DRYADFITEAAERFDIPAGWIRSVLRAESDGDARSTSPKGAMGLMQIMPQTWAELRVHYG 118 Query: 92 LGNDPYDPHDNILAGTAYLRELFDRYGSPGFLAAYNAGPARYEEHLAGRSLPAETQAYLQ 151 LG+DPYDPHDNI+AG AYLRELFDRYG PGFLAAYNAGP RYE GR LP ET+AY++ Sbjct: 119 LGDDPYDPHDNIMAGAAYLRELFDRYGHPGFLAAYNAGPTRYEAFRKGRPLPRETRAYVE 178 Query: 152 RLAPVVGSDIA---ASSTIGSLRPSA-----AALFVVWSESSKTAARLEPKRSPNRAPTT 203 LAPV+ D A AS + +P A +F++ + T A +R P A T Sbjct: 179 ALAPVIAPDDAGADASRVSAAPQPEQPSWARAPIFILPPTRTSTPATAPRERLPAEATAT 238 Query: 204 ASVHDISAIVPQATGLFVVRCDAGGPR 230 ++V D+SAIVP + GLFV R GG R Sbjct: 239 SAVRDVSAIVPPSAGLFVTRPGTGGAR 265 >ref|YP_001417769.1| lytic transglycosylase catalytic [Xanthobacter autotrophicus Py2] gb|ABS68112.1| Lytic transglycosylase catalytic [Xanthobacter autotrophicus Py2] Length = 258 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 114/204 (55%), Positives = 138/204 (67%), Gaps = 5/204 (2%) Query: 32 DSHADFVEQAALRFGVPLHWIRAVINVESAGDVRARSPKGAMGLMQIMPEAWAELRLRYD 91 D A F+ +A+ RFG+P WIRAV+ ESAGDVRA S GAMGLMQIMP W ELR R+ Sbjct: 55 DPFAVFIAEASQRFGIPERWIRAVMRAESAGDVRAISSAGAMGLMQIMPHTWTELRTRHR 114 Query: 92 LGNDPYDPHDNILAGTAYLRELFDRYGSPGFLAAYNAGPARYEEHLAGRSLPAETQAYLQ 151 LG DPY P DNILAG AYLRE++DRYGSPGFLAAYNAGP RYEE+LAGR LPAET+AY+ Sbjct: 115 LGRDPYSPRDNILAGAAYLREMYDRYGSPGFLAAYNAGPGRYEEYLAGRPLPAETRAYVA 174 Query: 152 RLAPVV-GSDIAASSTIGSLRP----SAAALFVVWSESSKTAARLEPKRSPNRAPTTASV 206 L P+ G D+ + + P + A LFV E A + P+ AP T V Sbjct: 175 ALVPLFGGGDLPSPVAVAVADPPQAWTRAPLFVARIERISAADPAQTPHHPDDAPATPPV 234 Query: 207 HDISAIVPQATGLFVVRCDAGGPR 230 ++SAI+PQ++GLFV R D GP+ Sbjct: 235 REVSAIMPQSSGLFVARPDGRGPQ 258