BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0068.0048.p (165 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771874.1| small heat shock protein [Bradyrhizobium japoni... 222 2e-56 ref|NP_771861.1| small heat shock protein [Bradyrhizobium japoni... 221 3e-56 ref|YP_571741.1| heat shock protein Hsp20 [Nitrobacter hamburgen... 217 4e-55 ref|YP_318725.1| heat shock protein Hsp20 [Nitrobacter winograds... 214 4e-54 ref|ZP_01044900.1| Heat shock protein [Nitrobacter sp. Nb-311A] ... 199 1e-49 >ref|NP_771874.1| small heat shock protein [Bradyrhizobium japonicum USDA 110] gb|AAC44757.1| small heat shock protein HspC [Bradyrhizobium japonicum] dbj|BAC50499.1| small heat shock protein [Bradyrhizobium japonicum USDA 110] Length = 166 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 104/164 (63%), Positives = 135/164 (82%), Gaps = 2/164 (1%) Query: 1 MAITDLPPWGRG-RDLTTRRSENYNPVLTLHREMNRLFDDAFRGFDVAPFGGSFLEQSMN 59 M I DL PW G R++ R + NP LTLHREMNR+FD+ FRGFD+APFG S + Sbjct: 1 MGIKDLIPWNNGGREVGIHRGADVNPFLTLHREMNRMFDEVFRGFDLAPFGSSRGLSGLG 60 Query: 60 WPSIEVNESNQDVKVTAELPGLDEKDVQIELANGVLSIKGEKKTETEDKDRRFSERYYGR 119 WP I+++E++++V++TAELPGL+EKDV +E+ANGVLSI GEKK+E+EDK RRFSERYYGR Sbjct: 61 WPQIDIDETDKEVRITAELPGLEEKDVSLEIANGVLSISGEKKSESEDKARRFSERYYGR 120 Query: 120 FERRIPIEDVDQDKISAAFKNGVLTVTMPKLPQAESKVKRIAIN 163 FERRIP+E +D+DK+SAAFKNGVLT+T+PK +A++ V+RIAIN Sbjct: 121 FERRIPLEGIDEDKVSAAFKNGVLTITVPKSAEAKN-VRRIAIN 163 >ref|NP_771861.1| small heat shock protein [Bradyrhizobium japonicum USDA 110] emb|CAA05837.1| HspF [Bradyrhizobium japonicum] dbj|BAC50486.1| small heat shock protein [Bradyrhizobium japonicum USDA 110] Length = 163 Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 105/166 (63%), Positives = 136/166 (81%), Gaps = 4/166 (2%) Query: 1 MAITDLPPWGRG-RDLTTRRSENYNPVLTLHREMNRLFDDAFRGFDVAPFGGSFLEQSMN 59 MA+ +L PW G R+L RR+E NP L+LHREMNRLFDD FRG D+ F +M Sbjct: 1 MALRELIPWNNGSRNLPARRTEVDNPFLSLHREMNRLFDDVFRGVDIGQFAPP---ATMG 57 Query: 60 WPSIEVNESNQDVKVTAELPGLDEKDVQIELANGVLSIKGEKKTETEDKDRRFSERYYGR 119 WPS+E NE++++VKV AELPG+++KDV++ELA+GVL+I GEKK+ET+DK+RRFSERYYGR Sbjct: 58 WPSVEFNETDKEVKVIAELPGIEQKDVEVELADGVLTISGEKKSETKDKERRFSERYYGR 117 Query: 120 FERRIPIEDVDQDKISAAFKNGVLTVTMPKLPQAESKVKRIAINSK 165 FERRIP++DVDQDK++A+FK+G+LTVT+PK P + KVKRIAIN K Sbjct: 118 FERRIPVDDVDQDKVAASFKDGILTVTLPKSPTEQRKVKRIAINGK 163 >ref|YP_571741.1| heat shock protein Hsp20 [Nitrobacter hamburgensis X14] ref|YP_571957.1| heat shock protein Hsp20 [Nitrobacter hamburgensis X14] gb|ABE64909.1| heat shock protein Hsp20 [Nitrobacter hamburgensis X14] gb|ABE65125.1| heat shock protein Hsp20 [Nitrobacter hamburgensis X14] Length = 166 Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 104/164 (63%), Positives = 133/164 (81%), Gaps = 2/164 (1%) Query: 1 MAITDLPPWGRG-RDLTTRRSENYNPVLTLHREMNRLFDDAFRGFDVAPFGGSFLEQSMN 59 M I DL PW G R++T R + NP TLHREMNR+FDD FRGFD+APFG + Sbjct: 1 MGIKDLIPWNNGGREVTIHRGADVNPFFTLHREMNRIFDDVFRGFDLAPFGSPPRLSGLG 60 Query: 60 WPSIEVNESNQDVKVTAELPGLDEKDVQIELANGVLSIKGEKKTETEDKDRRFSERYYGR 119 WP I+++E++++V++TAELPGLDEKDV +E+ANGVLSI GEKK+E+EDK RRFSERYYGR Sbjct: 61 WPQIDIDETDKEVRITAELPGLDEKDVSLEIANGVLSISGEKKSESEDKARRFSERYYGR 120 Query: 120 FERRIPIEDVDQDKISAAFKNGVLTVTMPKLPQAESKVKRIAIN 163 FERRI ++D+++DK SAAFKNGVLTVT+PK +A++ V+RIAIN Sbjct: 121 FERRIQLQDIEEDKASAAFKNGVLTVTVPKSVEAKN-VRRIAIN 163 >ref|YP_318725.1| heat shock protein Hsp20 [Nitrobacter winogradskyi Nb-255] gb|ABA05373.1| heat shock protein Hsp20 [Nitrobacter winogradskyi Nb-255] Length = 166 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 100/166 (60%), Positives = 134/166 (80%), Gaps = 1/166 (0%) Query: 1 MAITDLPPWGRGRDLTTRRSENYNPVLTLHREMNRLFDDAFRGFDVAPFG-GSFLEQSMN 59 M++ DL PW R + +R E P LTLHREMNRLFDD FRG D+ PF +++ + Sbjct: 1 MSMRDLIPWNRSSRVPVQRGEEGTPFLTLHREMNRLFDDVFRGLDLNPFRFDRVFDRAWS 60 Query: 60 WPSIEVNESNQDVKVTAELPGLDEKDVQIELANGVLSIKGEKKTETEDKDRRFSERYYGR 119 WPSIEV+E++++V+VTAELPGL+EKDV+++L+NGVL+IKGEK+TETED DR FSER+YGR Sbjct: 61 WPSIEVSENDKEVRVTAELPGLEEKDVEVQLSNGVLAIKGEKRTETEDNDRLFSERFYGR 120 Query: 120 FERRIPIEDVDQDKISAAFKNGVLTVTMPKLPQAESKVKRIAINSK 165 FERRIP++D+D+DK++A+F NGVL VT+P+ +A+ VKRIAIN K Sbjct: 121 FERRIPVDDIDEDKVNASFGNGVLVVTLPRSAEAQRNVKRIAINGK 166 >ref|ZP_01044900.1| Heat shock protein [Nitrobacter sp. Nb-311A] gb|EAQ36905.1| Heat shock protein [Nitrobacter sp. Nb-311A] Length = 168 Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 98/168 (58%), Positives = 133/168 (79%), Gaps = 4/168 (2%) Query: 1 MAITDLPPWGRGRDL--TTRRSENYNPVLTLHREMNRLFDDAFRGFDV-APFGGSFLEQS 57 M++ DL PWGR D T R ++ NP L+LHREMNRLFDD FRGFD P GS S Sbjct: 1 MSVRDLIPWGRSNDHIPTVFRDDDRNPFLSLHREMNRLFDDVFRGFDSRLPAFGSPSSFS 60 Query: 58 MNWPSIEVNESNQDVKVTAELPGLDEKDVQIELANGVLSIKGEKKTETEDKDRRFSERYY 117 WP++E++E++Q++KVTAE+PGL+EKD+++ L +GVL++KGEK++E EDK+++FSER+Y Sbjct: 61 AAWPNVEISETDQEIKVTAEIPGLEEKDIEVLLNDGVLTLKGEKRSEVEDKEKQFSERFY 120 Query: 118 GRFERRIPIE-DVDQDKISAAFKNGVLTVTMPKLPQAESKVKRIAINS 164 GRFERRIP+ +V++DKI A FKNGVL V +PK P+A+S+VKRIAI S Sbjct: 121 GRFERRIPLGLEVEEDKIEARFKNGVLNVVLPKSPKAQSQVKRIAIKS 168