BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0068.0041.p (540 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239060.1| chaperonin GroEL [Bradyrhizobium sp. BTAi1] ... 988 0.0 ref|YP_001204748.1| chaperonin GroEL [Bradyrhizobium sp. ORS 278... 983 0.0 ref|NP_771867.1| chaperonin GroEL [Bradyrhizobium japonicum USDA... 971 0.0 ref|YP_318720.1| chaperonin GroEL [Nitrobacter winogradskyi Nb-2... 942 0.0 ref|YP_617121.1| chaperonin GroEL [Sphingopyxis alaskensis RB225... 926 0.0 >ref|YP_001239060.1| chaperonin GroEL [Bradyrhizobium sp. BTAi1] sp|A5EG60.1|CH603_BRASB RecName: Full=60 kDa chaperonin 3; AltName: Full=GroEL protein 3; AltName: Full=Protein Cpn60 3 gb|ABQ35154.1| 60 kDa chaperonin (protein Cpn60) (groEL protein) [Bradyrhizobium sp. BTAi1] Length = 540 Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust. Identities = 488/540 (90%), Positives = 521/540 (96%) Query: 1 MAAKDVKFATEARERMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEV 60 MAAKDVKF+T+AR+RMLRGVD LANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKE+ Sbjct: 1 MAAKDVKFSTDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI 60 Query: 61 ELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIFKEGSKSVAAGMNPMDLKRGI 120 ELEDKFENMGAQMVREVASKT DLAGDGTTTATVLAQAI KEG+KSVAAGMNPMDLKRGI Sbjct: 61 ELEDKFENMGAQMVREVASKTADLAGDGTTTATVLAQAIVKEGAKSVAAGMNPMDLKRGI 120 Query: 121 DLAVDAVVSDLKSHARKITSNDEIAQVGTISANGDTEIGRFLADAMNKVGNEGVITVEEA 180 DLAVDA+V+DLK+HA+KITSNDEIAQVGTISANGD EIGRFLA+AM KVGNEGVITVEEA Sbjct: 121 DLAVDAIVADLKAHAKKITSNDEIAQVGTISANGDNEIGRFLAEAMQKVGNEGVITVEEA 180 Query: 181 KSLHTELEVVEGMQFDRGYISPYFVTNPEKMRVELEDPYVLIHEKKLSGLQTMLPLLEQV 240 KSL TELEVVEGMQFDRGY+SPYFVTN EKMRVELEDPY+LIHEKKLSGLQTMLPLLE V Sbjct: 181 KSLDTELEVVEGMQFDRGYVSPYFVTNSEKMRVELEDPYILIHEKKLSGLQTMLPLLEAV 240 Query: 241 VQSGKPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGNV 300 VQSGKPLLI+AED+EGEALATLVVN+LRGGLK+AAVKAPGFGDRRKAMLEDIAILTGG Sbjct: 241 VQSGKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTT 300 Query: 301 ISEDLGIKLENVTVKMLGRAKKVVIDKDNTTIVEGAGAKKDIEARAQQIRLQIEETTSDY 360 ISEDLGIKLENVT+ MLGRAKKVVIDK+NTTIV+GAGAKKDIEAR QQI+LQIEETTSDY Sbjct: 301 ISEDLGIKLENVTLSMLGRAKKVVIDKENTTIVDGAGAKKDIEARTQQIKLQIEETTSDY 360 Query: 361 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALL 420 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDA+HATRAAVEEGILPGGGVALL Sbjct: 361 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGVALL 420 Query: 421 RALEALDGIKTANADQKAGIDIVRRAIRMPARQIVQNAGEDGSLVVGKLLEHQSYNWGFN 480 RA + LDG+KTANADQKAG+DI+RRAI++P RQIVQNAGEDGSLVVGKLLE +Y+WGFN Sbjct: 421 RATKVLDGVKTANADQKAGVDIIRRAIQVPVRQIVQNAGEDGSLVVGKLLEKDTYSWGFN 480 Query: 481 AATGEYEDLVKAGVIDPAKVVRTALQDAASVASLLITTEALVAEKPKKAESASAAPAMDF 540 AATGEY+DLV+AGVIDPAKVVRTALQDAASVASLLITTEALVA+KPKKAE+ AAPAMDF Sbjct: 481 AATGEYQDLVQAGVIDPAKVVRTALQDAASVASLLITTEALVADKPKKAEATQAAPAMDF 540 >ref|YP_001204748.1| chaperonin GroEL [Bradyrhizobium sp. ORS 278] sp|A4YRI5.1|CH601_BRASO RecName: Full=60 kDa chaperonin 1; AltName: Full=GroEL protein 1; AltName: Full=Protein Cpn60 1 emb|CAL76511.1| 60 kDa chaperonin (Protein Cpn60) (groEL protein) [Bradyrhizobium sp. ORS 278] Length = 539 Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust. Identities = 488/540 (90%), Positives = 522/540 (96%), Gaps = 1/540 (0%) Query: 1 MAAKDVKFATEARERMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEV 60 MAAKDVKF+T+AR+RMLRGVD LANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKE+ Sbjct: 1 MAAKDVKFSTDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI 60 Query: 61 ELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIFKEGSKSVAAGMNPMDLKRGI 120 ELEDKFENMGAQMVREVASKT DLAGDGTTTATVLAQAI KEG+KSVAAGMNPMDLKRGI Sbjct: 61 ELEDKFENMGAQMVREVASKTADLAGDGTTTATVLAQAIVKEGAKSVAAGMNPMDLKRGI 120 Query: 121 DLAVDAVVSDLKSHARKITSNDEIAQVGTISANGDTEIGRFLADAMNKVGNEGVITVEEA 180 DLAV+A+V DLK+HA+KITSNDEIAQVGTISANGD+EIGRFLA+AM KVGNEGVITVEEA Sbjct: 121 DLAVEAIVKDLKAHAKKITSNDEIAQVGTISANGDSEIGRFLAEAMQKVGNEGVITVEEA 180 Query: 181 KSLHTELEVVEGMQFDRGYISPYFVTNPEKMRVELEDPYVLIHEKKLSGLQTMLPLLEQV 240 KSL TELEVVEGMQFDRGY+SPYFVTN EKMRVELEDPY+LIHEKKLSGLQTMLPLLE V Sbjct: 181 KSLDTELEVVEGMQFDRGYVSPYFVTNSEKMRVELEDPYILIHEKKLSGLQTMLPLLEAV 240 Query: 241 VQSGKPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGNV 300 VQSGKPLLI+AED+EGEALATLVVN+LRGGLK+AAVKAPGFGDRRKAMLEDIAILTGG Sbjct: 241 VQSGKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTT 300 Query: 301 ISEDLGIKLENVTVKMLGRAKKVVIDKDNTTIVEGAGAKKDIEARAQQIRLQIEETTSDY 360 ISEDLGIKLENVT+ MLGRAKKVVIDK+NTTIV+GAGAKKDIEAR QQIRLQIEETTSDY Sbjct: 301 ISEDLGIKLENVTLSMLGRAKKVVIDKENTTIVDGAGAKKDIEARTQQIRLQIEETTSDY 360 Query: 361 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALL 420 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDA+HATRAAVEEGILPGGGVALL Sbjct: 361 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGVALL 420 Query: 421 RALEALDGIKTANADQKAGIDIVRRAIRMPARQIVQNAGEDGSLVVGKLLEHQSYNWGFN 480 RA + LDG+KTANADQKAG+DI+RRAI++P RQIVQNAG+DGSLVVGKLLE SY+WGFN Sbjct: 421 RATKVLDGVKTANADQKAGVDIIRRAIQVPVRQIVQNAGDDGSLVVGKLLEKDSYSWGFN 480 Query: 481 AATGEYEDLVKAGVIDPAKVVRTALQDAASVASLLITTEALVAEKPKKAESASAAPAMDF 540 AATGEY+DLV+AGVIDPAKVVRTALQDAASVASLLITTEALVA+KPKKAE+A AAPAMD+ Sbjct: 481 AATGEYQDLVQAGVIDPAKVVRTALQDAASVASLLITTEALVADKPKKAETA-AAPAMDY 539 >ref|NP_771867.1| chaperonin GroEL [Bradyrhizobium japonicum USDA 110] sp|P77829.3|CH601_BRAJA RecName: Full=60 kDa chaperonin 1; AltName: Full=GroEL protein 1; AltName: Full=Protein Cpn60 1 gb|AAC44753.1| heat shock protein GroEL1 [Bradyrhizobium japonicum] dbj|BAC50492.1| heat shock protein [Bradyrhizobium japonicum USDA 110] Length = 540 Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust. Identities = 479/540 (88%), Positives = 517/540 (95%) Query: 1 MAAKDVKFATEARERMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEV 60 MAAK+VKF+T+AR+R+LRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKE+ Sbjct: 1 MAAKEVKFSTDARDRVLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI 60 Query: 61 ELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIFKEGSKSVAAGMNPMDLKRGI 120 ELEDKFENMGAQMVREVASKT+DLAGDGTTTATVLAQAI KEG+KSVAAGMNPMDLKRGI Sbjct: 61 ELEDKFENMGAQMVREVASKTSDLAGDGTTTATVLAQAIVKEGAKSVAAGMNPMDLKRGI 120 Query: 121 DLAVDAVVSDLKSHARKITSNDEIAQVGTISANGDTEIGRFLADAMNKVGNEGVITVEEA 180 DLAV+A+V+DLK+HA+K+T+N+EIAQ+ TISANGD EIGRFLADAM KVGN+GVITVEEA Sbjct: 121 DLAVEAIVNDLKAHAKKVTTNEEIAQIATISANGDIEIGRFLADAMQKVGNDGVITVEEA 180 Query: 181 KSLHTELEVVEGMQFDRGYISPYFVTNPEKMRVELEDPYVLIHEKKLSGLQTMLPLLEQV 240 KSL TELEVVEGMQFDRGY SPYFVTN EKMRVE EDPY+LIHEKKLS LQ+MLPLLE V Sbjct: 181 KSLDTELEVVEGMQFDRGYASPYFVTNAEKMRVEFEDPYILIHEKKLSTLQSMLPLLEAV 240 Query: 241 VQSGKPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGNV 300 VQSGKPLL++AED+EGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGG Sbjct: 241 VQSGKPLLVVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQA 300 Query: 301 ISEDLGIKLENVTVKMLGRAKKVVIDKDNTTIVEGAGAKKDIEARAQQIRLQIEETTSDY 360 ISEDLGIKLENVT+KMLGRAKKVVIDK+NTTIV GAG+KKDIEAR QI++QIEETTSDY Sbjct: 301 ISEDLGIKLENVTLKMLGRAKKVVIDKENTTIVNGAGSKKDIEARVTQIKMQIEETTSDY 360 Query: 361 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALL 420 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALL Sbjct: 361 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALL 420 Query: 421 RALEALDGIKTANADQKAGIDIVRRAIRMPARQIVQNAGEDGSLVVGKLLEHQSYNWGFN 480 R L+ALD IKT NADQKAG+DIVRRAI++PARQIVQNAGEDGSLVVGKLLE+ SYNWGFN Sbjct: 421 RGLKALDAIKTVNADQKAGVDIVRRAIQVPARQIVQNAGEDGSLVVGKLLENSSYNWGFN 480 Query: 481 AATGEYEDLVKAGVIDPAKVVRTALQDAASVASLLITTEALVAEKPKKAESASAAPAMDF 540 AA+GEY+DL KAGVIDPAKVVRTALQDAASVA+LLITTEAL+AEKPKK+E A AAP MDF Sbjct: 481 AASGEYQDLAKAGVIDPAKVVRTALQDAASVAALLITTEALIAEKPKKSEPAPAAPPMDF 540 >ref|YP_318720.1| chaperonin GroEL [Nitrobacter winogradskyi Nb-255] sp|Q3SQS3.1|CH601_NITWN RecName: Full=60 kDa chaperonin 1; AltName: Full=GroEL protein 1; AltName: Full=Protein Cpn60 1 gb|ABA05368.1| chaperonin Cpn60/TCP-1 [Nitrobacter winogradskyi Nb-255] Length = 542 Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/542 (87%), Positives = 507/542 (93%), Gaps = 2/542 (0%) Query: 1 MAAKDVKFATEARERMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEV 60 MAAK+V+F+++ARE+MLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKE+ Sbjct: 1 MAAKEVRFSSDAREKMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI 60 Query: 61 ELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIFKEGSKSVAAGMNPMDLKRGI 120 EL+DKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAI KEG+K+VAAGMNPMDLKRGI Sbjct: 61 ELDDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVKEGAKAVAAGMNPMDLKRGI 120 Query: 121 DLAVDAVVSDLKSHARKITSNDEIAQVGTISANGDTEIGRFLADAMNKVGNEGVITVEEA 180 DLAV+AVV DL +A+KITSN EIAQV TISANGDTEIGRFLA+AM KVGNEGVITVEEA Sbjct: 121 DLAVEAVVKDLTKNAKKITSNSEIAQVATISANGDTEIGRFLAEAMQKVGNEGVITVEEA 180 Query: 181 KSLHTELEVVEGMQFDRGYISPYFVTNPEKMRVELEDPYVLIHEKKLSGLQTMLPLLEQV 240 KSL TELEVVEGMQFDRGY+SPYFVT+ EKMRVE EDPYVLIHEKKLSGLQ M+PLLE V Sbjct: 181 KSLETELEVVEGMQFDRGYVSPYFVTDAEKMRVEFEDPYVLIHEKKLSGLQAMVPLLESV 240 Query: 241 VQSGKPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGNV 300 VQSGKPLL+IAED+EGEALATLVVN+LRGGLKVAAVKAPGFGDRRKAMLEDIAILTGG Sbjct: 241 VQSGKPLLVIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTA 300 Query: 301 ISEDLGIKLENVTVKMLGRAKKVVIDKDNTTIVEGAGAKKDIEARAQQIRLQIEETTSDY 360 ISEDLGIKLENVT+ MLGRAKKVVIDK+NTTIV+GAG KKDIEAR QI+ QIEETTSDY Sbjct: 301 ISEDLGIKLENVTLNMLGRAKKVVIDKENTTIVDGAGRKKDIEARVTQIKAQIEETTSDY 360 Query: 361 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALL 420 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALL Sbjct: 361 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALL 420 Query: 421 RALEALDGIKTANADQKAGIDIVRRAIRMPARQIVQNAGEDGSLVVGKLLEHQSYNWGFN 480 RAL+ALD +K N DQKAG+DIVRRAI++PARQI+QNAGEDGSLVVGKLLE +YNWGFN Sbjct: 421 RALKALDAVKPDNPDQKAGVDIVRRAIQVPARQIIQNAGEDGSLVVGKLLEKNTYNWGFN 480 Query: 481 AATGEYEDLVKAGVIDPAKVVRTALQDAASVASLLITTEALVAEKPKKAESASAAP--AM 538 AATGEY+DLV GVIDPAKVVRTALQDAASVASLLITTEALVAEKPKK + + P M Sbjct: 481 AATGEYQDLVGVGVIDPAKVVRTALQDAASVASLLITTEALVAEKPKKDVAPALPPGGGM 540 Query: 539 DF 540 DF Sbjct: 541 DF 542 >ref|YP_617121.1| chaperonin GroEL [Sphingopyxis alaskensis RB2256] sp|Q1GRD4.1|CH602_SPHAL RecName: Full=60 kDa chaperonin 2; AltName: Full=GroEL protein 2; AltName: Full=Protein Cpn60 2 gb|ABF53788.1| chaperonin GroEL [Sphingopyxis alaskensis RB2256] Length = 539 Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/540 (85%), Positives = 503/540 (93%), Gaps = 1/540 (0%) Query: 1 MAAKDVKFATEARERMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEV 60 MAAK+VKFA++AR+RMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKE+ Sbjct: 1 MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI 60 Query: 61 ELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIFKEGSKSVAAGMNPMDLKRGI 120 EL DKFENMGAQM+REVASK ND AGDGTTTATVLAQAI +EGSK+VAAGMNPMD+KRGI Sbjct: 61 ELADKFENMGAQMLREVASKQNDKAGDGTTTATVLAQAIVREGSKAVAAGMNPMDVKRGI 120 Query: 121 DLAVDAVVSDLKSHARKITSNDEIAQVGTISANGDTEIGRFLADAMNKVGNEGVITVEEA 180 DLAV AVV DL++HA+K+++N EIAQV TISANGD E+GR LA+AM+KVGNEGVITVEEA Sbjct: 121 DLAVKAVVKDLETHAKKVSANSEIAQVATISANGDEEVGRILAEAMDKVGNEGVITVEEA 180 Query: 181 KSLHTELEVVEGMQFDRGYISPYFVTNPEKMRVELEDPYVLIHEKKLSGLQTMLPLLEQV 240 KSL TELE VEGMQFDRGY+SPYF+TN EK++VEL+DPY+LIHEKKLS LQ MLPLLE V Sbjct: 181 KSLATELETVEGMQFDRGYLSPYFITNAEKLKVELDDPYILIHEKKLSNLQAMLPLLEAV 240 Query: 241 VQSGKPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGNV 300 VQSGKPLLIIAED+EGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGNV Sbjct: 241 VQSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGNV 300 Query: 301 ISEDLGIKLENVTVKMLGRAKKVVIDKDNTTIVEGAGAKKDIEARAQQIRLQIEETTSDY 360 +SEDLGIKLENVTV MLGRAKKVVIDKDNTTIV+G GA+ DI+AR QIR QI+ TTSDY Sbjct: 301 VSEDLGIKLENVTVNMLGRAKKVVIDKDNTTIVDGVGARTDIDARIAQIRQQIDTTTSDY 360 Query: 361 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALL 420 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDA+HATRAAVEEGILPGGG+ALL Sbjct: 361 DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALL 420 Query: 421 RALEALDGIKTANADQKAGIDIVRRAIRMPARQIVQNAGEDGSLVVGKLLEHQSYNWGFN 480 RAL+ALDG+K AN DQ++GIDIVRRA+R PARQI NAGEDG+ +VGKLLE YNWGFN Sbjct: 421 RALKALDGLKAANDDQQSGIDIVRRALRAPARQIADNAGEDGAWIVGKLLESSDYNWGFN 480 Query: 481 AATGEYEDLVKAGVIDPAKVVRTALQDAASVASLLITTEALVAEKPKKAESASAAPAMDF 540 AATGEYEDLVKAGVIDPAKVVRTALQDAASVA+LLITTEALVAE PK+ E A+ PAMDF Sbjct: 481 AATGEYEDLVKAGVIDPAKVVRTALQDAASVAALLITTEALVAELPKE-EKAAPMPAMDF 539